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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000255_pilon:80640..85029- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_027552 ID=XLOC_027552|Name=XLOC_027552|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4390bp|location=Sequence derived from alignment at sc0000255_pilon:80640..85029- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTTTACTGGAAAGGTAATACAGTTGCTGTACTATCCTTTGATAAACA
TCAGAATGATTTCAGGCTAAAGAATTCTTTCTCTGTGGAAACAGAAATTA
AGGATGTTATTTACACCGATTTCCACTTGGATGAAAAGTCATCAGGTATA
GTTGTTTTATTTTTTTGTGATTGAGGGAGGGAAAAAAGTGAAGCGGCCTC
ACCAAAACTTACGAGATGAGCAATATATCTCGTGAGTGTACAAATTATTG
CGATTTTCTAAAGTTTCTGCCTTTCCAATTTCTGAGGCAATTAGCGAAGT
TTATGCACATGAAAAATTCTTTACAAAAGTTAATATAGAAAACTTCTAGT
TCACTATAAATAAATGATTTTGATTATATTATTTTCACACATATAGCACC
TCTAAAAGGTATGAACAACCGTTTTTAACGAATTTAATATTTGTACTTTT
AAAAGCCAATTCAATTTTTGCTTTAACTCCCTAGGATTGGGGAAACTGAC
AGATACCAGACTTGTGCTCTCAAAACATTTGAGCATATTTTAACATTTCT
TACTTTAAATTTCTACTTCTATTTTGTTGTAGAACTTTCACAATGTCTGT
GTGTACTCGAGAAATCTTGTTTAAACATCTTCACTGAAGTTGGGAAACTC
TTCATTGCATCATTACCTTTCAAAGTAAGTTCCATTTTGCGGTCTAACTA
TATAGAGATACTAGATTATAATACTTCCGGGGGGATATTTATCATTCTTT
CACTCGATCCATCAAATGCTTTGGTCGATTCAACAAATCACCTACGTTAC
ACGTTTTTTTTATTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGA
ATGCCTAAAAACTAAGAAAAACTAGTTTCTTAAAAAAATGTGTATTACAC
TTATAATATAATCAAGTATGTAATGCAAAAGGCAGGGTTTTCGAAAATTA
TCTTTGTTTAGATTTTGTTTCATTTTCACGATCAGCTTTTTTTTTCTAAT
TAGGTGAAAAAGATTTGGGGAATCAGTAAAGGAATTTGTGCTGAAAGAGA
AGCGAATTCAAAAGACGCAGAGGAGGAAAAAGGGTATACTGCTTTACGCC
TCTTTTATGATGGAAGTCTTTTTAACCTTTTTGGACCCCTTTTTGCACGA
AAGAAATGGAATTCTCGAAAAAAGTGATCGGAAGGATTTTGTACAACGTC
TCGTACGTGAGATAGGTACGGTTCGTAATAGGTCTACCTTCTACTCAAAA
TTGTTTTCTTTCAACTGCACCGGCCCGAACGAATTTTGGTCTTAGTGATA
GATAGACTTTTTGAAAACAAAGAAAAATCAAGTTAAATTTTATCGCCAAG
AAAAATGAAAATTTTCCGCCTGGATCTTTCGTACTAGATGTGATAATTCT
TTCTTTTCTTATCTTTTTTCCTTTTATCAAGTATGCCAACGCTATTCAGC
CTTGCACATCCAATGGAAGACTTCAAACCGGTGGTTTATCATTACCTAGG
TAAAAATCTGATTGAACAAATTATCCTATAGAGTTATTCACCCTAAAAAT
AATCTTTGTTTGCTAGGCACCAAAGATTTCAAATTTTCTGTTCATTTTCC
CTTTTATTTCAGATAACAGGAAACCAATGTACTTCACAGATGCTACACAA
CATATTGTTTTCACCAGCCCCAAAGATTCGTTGATCATGACTTACGACTC
TGTTCTTGGTTTACATTCTGTCTGGAAAGCAAGAAAAGCTCTTGAACAGG
TGACTTAGTCATGGACTAAAATTTAAATCCTTAAACGAGTCTCCATTTCA
TACAATTGCTTCAGAGAACTTTTTTATACATTGCACATAATCTATCCTGA
ATGATTTATCAAGGCATTTACTGTTTTATTTATACTATTGAAAGCCCATT
AGTTGTTGAAATAAAATTCCGACAATTGTGTATTTTTCTTTTGTTACCAT
TAGGATTTTCCAGAAGTGCTCAGTCACCAAGACAGTTTACCAGAATTCGG
AATGATGAACCAATCCTCACAATTGGGTGCTCTCAAGGGTGGTCCTGGTA
TAACAGGGCGTTTCTCAATGTCGCCCTCTGTGACAACATCCAATAAACGT
CATTCATGCCCACCCATACCAATCCACTTACAACAAAAAGGTACACCAGG
AGCTTCAAGTTCACCAATGAGTCGGAAAGGTTTCTCACCAGCTGGTCATC
TTCATAAAGGATCACCTCATCACCATCTTCATGCTAATTCACATCACCAC
GAAGGTTTTTTTGTTGTTTTGTTGTACTTTTCCTGGAAAAAAAACACTCC
TTGTAAGGGAGAAATCCTTTTGAAAGTTTTTCGTTATTGACTTTTTTCTG
AAAAAATAAACCCCAAACCCCATGAGATTCTACCTTTTTAGACAAACCCC
TTGAAATTTTAACTGAAAATATTTTAATGACCACCGGAGCTCCGAATCCT
GCAGGTCTTCATAGTACCTCAATATTGAAAAGGAATTTGATTATACCTTA
CAAATCTAAGCTCACCACAGAGATCAGGTTATATATACTTACTCATTTCA
TTTTAGCTCATGAATCATCTTATGTTTCGGAGATCAACGGTTCAAAAAGA
TCACACATGAATTCCTTGATGATGTTCAGAATGTCTTGTGCTGATACGAG
GCTTGAAGAAGAAGCCGAACCTCTCCCTCCCAATCTGTGTTTGGAACAAG
TGTGGCAAGAACAAACTACTACTATAAGGTCCGAATGCACGTCATTTTAA
ATAGTCAATCAAAATTGAATATATTTTTAGCAAGAAAATCCGTCCAAAGA
ACGAGAAAGTCTATCCTTTCAAACTTTCCGCCCAGACTAGCGATGGTAGT
TGTAGTACTGAAAAAAAAGTGAAATAATGAAAATATCATTTTAGAAATGA
AAATCCTTAAAATTTTATCCTGTAAGAAAATATCATAAATGGTCGATTTT
TCTTTGATTTCTTGTATGGGGGGAGGGGGAGGGGATACTTAGGTATAATG
GGTACCGGCTATATCTGTGAGCCATAAGGGTTCCCTTTTTTAAATCCTAG
GAAGTCTCTCCAAGGGGTACAAAGACGATGAATTAACAATTGATTATCTG
AAAGTGTCCCAAAATTATGAAATATTAAAAATCGACTCTCTCAAACCTAG
TAGCCCCCGGGATTTCTCGTTAAACAAGAAAGTAATTTTTGTCATCCATA
GCCTGTAACAAGCCGAGTAGGGGCTGCGGTTTTTTACTTAATGGGAGGTC
TTTAGATGCAAGAGTCAATCAAGTTACAAAAGGTGATTAGAGAAATGATG
TTCATTGTTTACAATATGGTATCCCATAAAAAATGATATATTGCTGCTGA
AATTGTCCCATTTTTACGCCATAGAATGAGTGTAATAGTTATTCATCCTT
TGATCTTTCAGATATGGGTTAAAAGGAAAATCAGTATTTTGTTTCATGAG
TACCGATTTCAACGGTATTTCATATCTTGGCTATCTCGTCAAAGGACTTT
CAAAGTTAAAGTAAGTCTCTGACATTTGTTAAAATTTTTTTTAGGTATTG
CTCTTAATTTTCCACACAATACACCGGTAGCTAGAAATTTGCACTTTAGT
ACTGTGGAAGGTTAGAGGAATGTAAACATTGTCAATTTTTTTCTTTCCTT
TAAAGAGAATGATTTAGATATTTGAAAATGATATCAATGATAATTTTATG
GATCTCTCCTGAAAATTTCACAAAAATTCATTTAGAGGAAAAGAAGTTAT
GATTAAAAGGAGTTCTTTACCTACCGTTTCTCTGCTGGGTTTCCTTATGA
GAACCGGATTTTTACCTACCGCTTTTTTACGGGGGAGAGTGAAGTTTCCC
GCGGTCGCTAAAATCAAAACAATGGAAAATTGTTTGAGCGTGTGCGCAGT
CGAACTACTAAACGGTGTATTATTATGTTTAAGTGCCGCAATTGATGAGT
AAGTTTTAGCTGAATTTACTTTTTAAGTGCGGAAGCTTTTCTTCTATAGC
AAAATTATAATCACTACCTTGTTGCGTAGGAAGACTTTGTAAAAGCATGC
ATTGAGCTAGGGAAAGCAATTTCGTGTATGTCAAGCATCAAATTCTGTAA
TTGAATCGAAGAAAAAAAAAACTAATTTCCTGTCTACTGCTACGCACGAA
TACAAATTTCGAAAACGAATCCTTTTGTTTATTCTGCCTTGACAGCATCA
TAAGCAGTGTTCTTTCTCTCGTATATCTTCAAAATAATTTCTTTAATAAT
TTTCAATTTTTTCTGAATGGTCCTGTTTATCCCAAAAATTCATTTAGCTT
TTTTTTTTCATTTAAAGGTTGTTGAAAATCCATTACGGCAAATTTGAAAA
AGCAACAGAAATAGAATGTATGGACGCCGGTCCCCTACAG Coding sequence (CDS) from alignment at sc0000255_pilon:80640..85029- >XLOC_027552 ID=XLOC_027552|Name=XLOC_027552|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2334bp|location=Sequence derived from alignment at sc0000255_pilon:80640..85029- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTTTACTGGAAAGGTAATACAGTTGCTGTACTATCCTTTGATAAACA
TCAGAATGATTTCAGGCTAAAGAATTCTTTCTCTGTGGAAACAGAAATTA
AGGATGTTATTTACACCGATTTCCACTTGGATGAAAAGTCATCAGCAGGT
TTACTGGAAAGGTAATACAGTTGCTGTACTATCCTTTGATAAACATCAGA
ATGATTTCAGGCTAAAGAATTCTTTCTCTGTGGAAACAGAAATTAAGGAT
GTTATTTACACCGATTTCCACTTGGATGAAAAGTCATCAGAACTTTCACA
ATGTCTGTGTGTACTCGAGAAATCTTGTTTAAACATCTTCACTGAAGTTG
GGAAACTCTTCATTGCATCATTACCTTTCAAAAACTTTCACAATGTCTGT
GTGTACTCGAGAAATCTTGTTTAAACATCTTCACTGAAGTTGGGAAACTC
TTCATTGCATCATTACCTTTCAAAGTGAAAAAGATTTGGGGAATCAGTAA
AGGAATTTGTGCTGAAAGAGAAGCGAATTCAAAAGACGCAGAGGAGGAAA
AAGGGTGAAAAAGATTTGGGGAATCAGTAAAGGAATTTGTGCTGAAAGAG
AAGCGAATTCAAAAGACGCAGAGGAGGAAAAAGGTATGCCAACGCTATTC
AGCCTTGCACATCCAATGGAAGACTTCAAACCGGTGGTTTATCATTACCT
AGTATGCCAACGCTATTCAGCCTTGCACATCCAATGGAAGACTTCAAACC
GGTGGTTTATCATTACCTAGATAACAGGAAACCAATGTACTTCACAGATG
CTACACAACATATTGTTTTCACCAGCCCCAAAGATTCGTTGATCATGACT
TACGACTCTGTTCTTGGTTTACATTCTGTCTGGAAAGCAAGAAAAGCTCT
TGAACAGATAACAGGAAACCAATGTACTTCACAGATGCTACACAACATAT
TGTTTTCACCAGCCCCAAAGATTCGTTGATCATGACTTACGACTCTGTTC
TTGGTTTACATTCTGTCTGGAAAGCAAGAAAAGCTCTTGAACAGGATTTT
CCAGAAGTGCTCAGTCACCAAGACAGTTTACCAGAATTCGGAATGATGAA
CCAATCCTCACAATTGGGTGCTCTCAAGGGTGGTCCTGGTATAACAGGGC
GTTTCTCAATGTCGCCCTCTGTGACAACATCCAATAAACGTCATTCATGC
CCACCCATACCAATCCACTTACAACAAAAAGGTACACCAGGAGCTTCAAG
TTCACCAATGAGTCGGAAAGGTTTCTCACCAGCTGGTCATCTTCATAAAG
GATCACCTCATCACCATCTTCATGCTAATTCACATCACCACGAAGGATTT
TCCAGAAGTGCTCAGTCACCAAGACAGTTTACCAGAATTCGGAATGATGA
ACCAATCCTCACAATTGGGTGCTCTCAAGGGTGGTCCTGGTATAACAGGG
CGTTTCTCAATGTCGCCCTCTGTGACAACATCCAATAAACGTCATTCATG
CCCACCCATACCAATCCACTTACAACAAAAAGGTACACCAGGAGCTTCAA
GTTCACCAATGAGTCGGAAAGGTTTCTCACCAGCTGGTCATCTTCATAAA
GGATCACCTCATCACCATCTTCATGCTAATTCACATCACCACGAAGCTCA
TGAATCATCTTATGTTTCGGAGATCAACGGTTCAAAAAGATCACACATGA
ATTCCTTGATGATGTTCAGAATGTCTTGTGCTGATACGAGGCTTGAAGAA
GAAGCCGAACCTCTCCCTCCCAATCTGTGTTTGGAACAAGTGTGGCAAGA
ACAAACTACTACTATAAGCTCATGAATCATCTTATGTTTCGGAGATCAAC
GGTTCAAAAAGATCACACATGAATTCCTTGATGATGTTCAGAATGTCTTG
TGCTGATACGAGGCTTGAAGAAGAAGCCGAACCTCTCCCTCCCAATCTGT
GTTTGGAACAAGTGTGGCAAGAACAAACTACTACTATAAGATATGGGTTA
AAAGGAAAATCAGTATTTTGTTTCATGAGTACCGATTTCAACGGTATTTC
ATATCTTGGCTATCTCGTCAAAGGACTTTCAAAGTTAAAATATGGGTTAA
AAGGAAAATCAGTATTTTGTTTCATGAGTACCGATTTCAACGGTATTTCA
TATCTTGGCTATCTCGTCAAAGGACTTTCAAAGTTAAAGTTGTTGAAAAT
CCATTACGGCAAATTTGAAAAAGCAACAGAAATAGAATGTATGGACGCCG
GTCCCCTACAGGTTGTTGAAAATCCATTACGGCAAATTTGAAAAAGCAAC
AGAAATAGAATGTATGGACGCCGGTCCCCTACAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255_pilon | genome | sc0000255_pilon:80640..85029 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1096-1167:73 |
| Aaloc | 997-1092:979 |
| Aaloc | 826-993:1833 |
| Aaloc | 523-822:2438 |
| Aaloc | 388-522:2777 |
| Aaloc | 319-384:2959 |
| Aaloc | 238-315:3388 |
| Aaloc | 148-237:3807 |
| Aaloc | 1-144:4391 |
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