|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:2065280..2071282+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036050 ID=XLOC_036050|Name=XLOC_036050|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6003bp|location=Sequence derived from alignment at sc0000011_pilon:2065280..2071282+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGCAAGAGCAACTTTCACAGATCCAGGAGTTTATCCAAGAGGTAT
ATTatttactctgtaccagagtgtatctcacatTTTTTAGCTTTGTAGTG
CACTTTGTgcacattgtctgtttgataaaaaaattcctgcACGGAGACCT
CtacgatgaagtatgatttataaatagcaacacttctctcattgTCTCCA
Ctttctcaccaacactccatcgcagtggtcggtttgaaaaatctcaaatg
agaaaagacaatgacaacagactctttacagcaatgaattttgaaattag
ccgaaGATTCTGgatctgtgtacagacaatatATTATTTGACATTACCTT
AGTTTGTGTCTACTACAGCTTGTCTActtaaaaagcttttaaattttgct
gattcttccaagcaaaatcaattatatTTGATTAATTGTCAATTTCAAAC
AATCGTTCCGATCATGCCATTTAGCCAAGGTTAGGTAAATTGGTTGCGAT
TTCTACAGATAGACAGGGTTGATAAAATTAACCAATCTTTAATACTGTAA
GTGGTTATGATTTTTAGCTTGACAGAAaatgatttgtttatttttcaagg
gAACGGTCTTCCTTCGTTACAAAATTGagaatcatttttcttttgataaa
cgCTATTGAAATTTTTGAGGACCTTCTTGttaacacctgatttcttattT
CATTCTTCTTAGCGCCTGAAAGCGAAGATGAAGAAAACGACTTGAGACAA
CCGCTGTATCGAAACATTGAAATCAAAGGAATCACTGTCAAAATGAAATG
GTGTGAAACGTGTAGATTCTACCGACCACCTCGATGTTCACATTGTAGTG
TATGCAATAACTGTGTGGAGGTATAACTATAAATTTAAGAATGTTCTATt
tgtcattttgttttgttttttgagtATGTCTTATCGCAGAAAACTTTTCA
GTAAGATTTGAGTTACTTTGTGGAATTATTTATCAccaatatttttacca
tttctttgagtttcattttcttttttgatgaaccATGATGCCCAATACAT
CTCTGTcaactaccgtaagttggtctagtatcgacatccctcttctaatt
ccgacacccttctttagagttaGGAATAATATGGAGGTCGGAATTGCTGA
tggaaacttctttttttttgcttagtgatcagagaggaaaaaatcttttg
tttatcAGTTTAtcaccttcctattattccaaTCTCTAATAAAAGGTGTC
GAAATtggaggagggatgtcgacattggACCAACTTATGGTACCAACTAC
GAACCAAAAAGACGATTTGCAAATCAAAACttcattaattttctttttta
tctctgatttaaaaaagttcttttttgttaattttgcataggtttttGAT
CATCATTGCCCATGGGTTGACAATTGTATAGGGAAAAAGAATTACcgata
tttctttttcttcgtcACCTCTTTATCACTTCACATTTTGACGGTCATCG
CTTTCACCATACTGTTTGTGGTAAAGAAGAAAGGGGAAGGTGAAGGCATG
GTTCAAATACTTCCTGCGTATCTTTTTCATGAACAAAATCAGTTTCTCAT
TGTTAAATTTTCCTCTTGtgttactttaggcgtacaaactttcgcgagca
gaaactttcgcgaggacgaaaaatcgcgaaattcacgacatttactttcg
cgaatttaacggaaaaatatttttcgcgagcataaactttcgtgaatcaa
ggcgtaaaattgagaattttcacatgaaaaaatagcttaGAGGGAcgaat
acttcttggattggcttgaaacagtTGTCTTTTGACTTATTACTCTTTTA
GCTGGctaaaaagttacatttcattttaagtttgaagttttgcagatttt
ctattttgtcaagaatttttcgcgagcataaactttcgcgaaaagggtca
aattcgcgaaaatcgcgaaagtttctactcgcgaaagtttgtacgcctaa
agtattctcTAAAGCAGTAGACAGAAAAATTAAGTAAAGCACTTAGCTGG
CAAAAATACATTTCACACCTTGGAACATGTATGATTTTCTCACCCAGGTG
AATTTCTTGCATGTTTCAAGGTGTGAAATGCACTTTTCCAACCCAAGTGA
TCTGCTAATTCTTTCTCCAACTAACCGATACTTACTTGTTTACTGGAGCT
TTATAAAgctgttttaataaaaaaagattttggagtAAAGAGAATAATTC
ATTATGcataataataattatgcacAATATCATTACTGCATTAACTGTTC
GAATTAAAGGCATGTAAGGATTACCTCATACTTtagacattttgaaaaag
atgttTTGTAAGCAATTTTTAGCCAGTCAGAGCTTTATTCGACGTTTTTT
CATGACtttttttGcgtgaatctgctaataggaaatttcTGTATCGTTTA
GCACTAACTGATCGGAATCGCTTTCTCCTATTTTCTTTTTACGCACGTTT
TATTCTTGATATCATATCCTTGACAATTTCTTACAATGTTTTCACAGTAT
TATAATATTAGCTATAGCTGGTCTAGCTTCGTTTCCAGTACTTGGCTTAT
CAATATTCCACATCGGACTTGTTGCTCTTGGTAGGACTACCAACGAACAA
GTAAGAAAACCTCTTTCTTACAAATCACTGGGACCGCTTCCCACTTAAAC
AAAATTGGCCacaatatcgtccccggtggaaaaattatactcaaattttt
gccccgctgaaaatattcaGAAAAGTAAATcctaaaaaatgcaaaatatt
gtgctattttttcattaCCGCTGACCGCTGAATTTTCTAGCTCGAAAACA
AtcgaattcaaatccccagccataaaaacattgGGATATCAAAATCCCCA
TCAAGTctttactctaggggctgagttaggtcccgtatgcgcatcggcgt
atagtcattttttcttttgatcatgaaagtatagtccttgaagagtcaga
aaacgtgtgtggcgttatttggatcaggcacaaatttccataatggcgga
ttttagattttcaaccctttttagctctctatcaagagatacgaagtact
tacgttttctaagttttgaaaacgaaagtacttcatagcttGACATAgca
attttcagaccatggttctgacctttttcttaatcagcataaaatttctg
atcgattggtatatagtatgcggggttttaagctcaaaaaaatatttttc
ttaggctagcagagcctaagagcccatgtgacgaaagaaagttttgaatc
cgccattatggatttcgaaattcatgtagaattttattatttgaacggta
ggcaagaccctgcgaaaatttcaagtaaattaagtgagccaatcaaatgt
tacagccacgcaaacttggaaccaaaagtagtcatttcaaaaaatcaaaa
tcgaaagtgcttcatatctccagataacgaaattttcagaccatggttct
gacatttttcttaatcagcataaaatttgtgatcgattggtatataatat
gtctatgtttaaagggctaaaaagggttgaaaatcacATTCGGCTAAAgc
ttcagatgcatccggcTGGACCAAAGGGGGTCTTGAACCGGGAACCTATA
GGTTTCCAAACCAATGCCCTATCCACTAGGCCAAGCCGGCTGCCAAAAAT
CGTTATTTGGGGTTACTTATACGAAGGTCTTAGTACTATATATAAATAAG
TCtgactgacgagttaggctaactgttatgatcgcCATTACTCCGAAGAA
GCCACCACACGTGTGCACCGCCGGGTGGTTGCACCGCCGGCCGGGTGAGG
GGTTAGGGATTTGCACCAGGGTGGCGCAGCGTCCGCGCGgccggatgcat
ctgaagcATTAGCCGAatcttgaaaatctaaaatccgccattatggaaat
ttgtgtctgatccaaataacgccacacacgttttctgactcttcaagaac
tatactttcatgatcaaaagaaaaaaaaaatgactatacgccgatgtgca
tacgagacctaactcagcAACCTAGAGTGCTTTGTCTGTTATCATTACTC
GCTACCAGATCCACTGTGAGAAGGGACTGTGTCCCTAATTTGtcccattt
tttgaaaaaattaaatagagACTCTATTCATCAAAGTCATTAAACGTGAA
ACCTtgcatagcttcagccaggtttctagttccccccaacaaagtaaggt
ccccccaacaatttagctccccctACAAAATTaccttgtgctaggtcccc
tagcAAGTTaagctaaaacaaaaacattgttctcccgtgccccgtagaga
gaagtcaataaaaaatatatgcgagtacagttgtactgataaatgaaaac
taaattttacttgtattaatatttatgtttacaaatcttttactttttat
atttgatttaatagtaagataagagatcttttgaaattagctgaacagcc
cccatagtctcagtcagatcatctaggccccccccaaacaatctaggtcc
cccaataatttgataattttagcccccaggttctttaaaggccaaaatat
ttcttagcctcCCCCCAAAAGTAAAgggggggCTGAAGCTATTCCTTGGT
CGAGAAAGGTGGCAATTTCAAGGGCGCATCTTTTTGATGTGGTTTCTGGA
CGGGCATGTGACTTTGATTTAACGGGGAGTCACTATTTGATTAAGTAACC
ACCTGTAATATATTATTCGTATGGAGTAaacttgttttaacatttacTTT
TTATCTTTAGGTCACTGGTAAATTTGGCAGTGGACATAATCCATTTGATT
TGGGTTGTTACCAGAACTGTTGTACAGCTCTTTTTGGCCCACTACCGCCA
AGGTACGTTCACTACGTACTCAGTTTATTTGATAAAACTCTGAAACCTTT
TCAGGGATATTGGAAAATATGAATAATATTCCAGGAGGAATCCGAAAAGG
CCAAAGAAAAACTTTCTGGGAAGTTAGAAAAGTTGTCAAaatttctgtga
aaaaatctaGCTTTTTTAGTAAAGGTATTCATCATAATCTGAAGAATAAA
CCCATTTTTGGCAAGATTTTGGAATAACTATGGACACTCTAGTAATTTGT
CAAGCATAAACTGATAACCGCCGGGATGGTCTGACTAGTCTGACTTTGAT
AAAATAACCTCCATTGAATTTGATATAATCTTTACAaaactaccttaagt
ggataaattttggcgtggatttgatttggcgattggccaaaatacgattt
ttggcggggatttaatttggcgaattggaaattttgtcacactgaaatgg
gtgaaaattactcaaaaatatactaaaaaattatgatttttcacataatt
ctctttttgttaaatttagcgtggatttaatttggcgaattaacgaattt
ggaaattttggcgaggatttaatttggcgaattttggcacaattcgccaa
attcgccaaatttaatccccgccaaaatttatccacttaaggtatactGC
ACTAAGTAGTAAGTCTGTGACCGCAGTCGTGGGCGACCTAAAGGTTCCTT
TTTCggtagctatctacccgaaggtaggggagggtgcaaCTCATTctcct
ggattgctccactacCCTCGATCCTTCTCCTAATTGCTGAACATCAAACT
GAGAGTGCCATTTTTGTGGTACgtacgaagtctttggtatgacccagccg
ACGTACGACCTTACATATCATAGATGGATGCTCTatcactgcactacggt
cgcttatACGATTATAAGAGTACATTTTGTTTCACTTCAGGTATCTTGGC
TATAAAATGCcgaaaaggaaaaagaagaagaagggtTCACCGTACGGTGG
AGACGAAGAAACAGTGCATAATGGTGAACCGTTGCATACTCAGCACATTC
GTATAGAAATGGAACCCATAGCTGCTGGTGGTGACAGTATTAGTGATACT
AAG Coding sequence (CDS) from alignment at sc0000011_pilon:2065280..2071282+ >XLOC_036050 ID=XLOC_036050|Name=XLOC_036050|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000011_pilon:2065280..2071282+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGCAAGAGCAACTTTCACAGATCCAGGAGTTTATCCAAGAGATGT
TTGCAAGAGCAACTTTCACAGATCCAGGAGTTTATCCAAGAGCGCCTGAA
AGCGAAGATGAAGAAAACGACTTGAGACAACCGCTGTATCGAAACATTGA
AATCAAAGGAATCACTGTCAAAATGAAATGGTGTGAAACGTGTAGATTCT
ACCGACCACCTCGATGTTCACATTGTAGTGTATGCAATAACTGTGTGGAG
CGCCTGAAAGCGAAGATGAAGAAAACGACTTGAGACAACCGCTGTATCGA
AACATTGAAATCAAAGGAATCACTGTCAAAATGAAATGGTGTGAAACGTG
TAGATTCTACCGACCACCTCGATGTTCACATTGTAGTGTATGCAATAACT
GTGTGGAGgtttttGATCATCATTGCCCATGGGTTGACAATTGTATAGGG
AAAAAGAATTACcgatatttctttttcttcgtcACCTCTTTATCACTTCA
CATTTTGACGGTCATCGCTTTCACCATACTGTTTGTGGTAAAGAAGAAAG
GGGAAGGTGAAGGCATGGTTCAAATACTTCCTGCgtttttGATCATCATT
GCCCATGGGTTGACAATTGTATAGGGAAAAAGAATTACcgatatttcttt
ttcttcgtcACCTCTTTATCACTTCACATTTTGACGGTCATCGCTTTCAC
CATACTGTTTGTGGTAAAGAAGAAAGGGGAAGGTGAAGGCATGGTTCAAA
TACTTCCTGCTATTATAATATTAGCTATAGCTGGTCTAGCTTCGTTTCCA
GTACTTGGCTTATCAATATTCCACATCGGACTTGTTGCTCTTGGTAGGAC
TACCAACGAACAATATTATAATATTAGCTATAGCTGGTCTAGCTTCGTTT
CCAGTACTTGGCTTATCAATATTCCACATCGGACTTGTTGCTCTTGGTAG
GACTACCAACGAACAAGTCACTGGTAAATTTGGCAGTGGACATAATCCAT
TTGATTTGGGTTGTTACCAGAACTGTTGTACAGCTCTTTTTGGCCCACTA
CCGCCAAGGTCACTGGTAAATTTGGCAGTGGACATAATCCATTTGATTTG
GGTTGTTACCAGAACTGTTGTACAGCTCTTTTTGGCCCACTACCGCCAAG
GTATCTTGGCTATAAAATGCcgaaaaggaaaaagaagaagaagggtTCAC
CGTACGGTGGAGACGAAGAAACAGTGCATAATGGTGAACCGTTGCATACT
CAGCACATTCGTATAGAAATGGAACCCATAGCTGCTGGTGGTGACAGTAT
TAGTGATACTAAGGTATCTTGGCTATAAAATGCcgaaaaggaaaaagaag
aagaagggtTCACCGTACGGTGGAGACGAAGAAACAGTGCATAATGGTGA
ACCGTTGCATACTCAGCACATTCGTATAGAAATGGAACCCATAGCTGCTG
GTGGTGACAGTATTAGTGATACTAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:2065280..2071282 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 577-738:5842 |
| Aaloc | 484-573:4811 |
| Aaloc | 382-483:2549 |
| Aaloc | 205-378:1392 |
| Aaloc | 49-204:715 |
| Aaloc | 1-45:1 |
|
