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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000086_pilon:892781..897647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037085 ID=XLOC_037085|Name=XLOC_037085|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4867bp|location=Sequence derived from alignment at sc0000086_pilon:892781..897647+ (Clytia hemisphaerica_ch_hm2_pilon)
atggGTTTGTCTGAACTGATCGATATGATGATTTCGCCTAAAATTTTATC
GCCcaagtttttattgaaaggtAGGTGatgattttgttgtttttggattt
ttttcaaaacacttttgccgagcaagcttttcttttttgagttttacaca
gggcccacgccattcagggggggggggggtgcatgATCTCcctcactttt
tttttaaataaatatatGTTTCCAACTTTCcacaaaattgaaattcatgC
GTACTTTCAAAAGCTTAGTTGCTGGGCAAAATCAGTCTGAAATAAGGTCA
TTAGATATATTAGGGTGACTGTCGAAATCGCAATGTTTTCCCAAATCATG
GCTGAGCCTTCttagtatatatttttttcttgtttttacaaTTTGCCGAG
ACCATTTTAtctttgatattttatattcaaGTTTACGCtttttttttGAA
CAACCCACATTTTCGGCTCAGGAATGGAGTTGTTAAGGATTTTCcggatt
tcagccaaaaagttgCTTATgggttttgagccaaaaatgacTAGcaactt
caaagattttggctttttatctctttttatGTCCAAAATACCTCAAATTA
GGTGTTCAAATACCATCTGTTCACAATCTAATGCCAAATAATGTCGAAAA
TGTCTcttttttttaagtatttttggtTGCTTTCCCGGTTCATGCTCAGT
TTCAGGGCTAGGTTGCTAATGCTAAAAGTAGTGGCTTATGTTTTTACTAT
TGACTAACTCGGTTGGTTGCTTTTAAGAAGAATGTGTACTTTCAAGTCCA
AATTATTTGCTTCTTATTCACAGTCACTTTATTAGAAATATCTTCGTTGA
ATATTCTCTAAAGATGAGGAAATAACCTGGGTTGCAATAAGGCATTGAGA
CGATGAGTAGATTTAGCcaattctcaaagaaaatgtataTGCCAATTGTA
TAGAAAACGTTTTGTTGACTTACACAAATGTGTAGTTAAAACTGTCCCCT
AATTAGTAAACCAATATCCAGCCATTACAGATTATAtgcttctttataag
aacattttaagattaCGTTGAGGCtctattgttctcattttttcttGTTA
GGTTTACTGCATCATTTTATCACGTACGAAAATCTGAGATTTCCTATGTT
ACAAATAactttaaaagaaatattttcttcaacagTTTTCGTTTCTATTA
AACCAATTAAAAGCTCGTAGAATGCAGAGCTCTTTTTATAAATACCTACA
AATCCCCTATAGAAAACTTCCCGGCTTAGCACGAGTCCATTCGACTGATC
CTATAAAGCTAAGAGTcaattttattataagaatctGAGATTGGATGAGA
TATAATTtctacaatgtatagcaatgtgtcCTCCCGTAATgcctttatgg
caactcctgaacttgggcacaggatgtacggttacacattttgtggattg
cattgtggagtcacaagagtgctcaaactgcgagcagcgagcaatacata
atgcaaatagtgagcgtcttaaatgaagactctccacccAATCCAGGAGT
GCTCAAACTACAAAAGCAGTGAGCCaatatacaatgtatagcaatgtgcc
ctcccggttattacctaATTTCTAGATTGATTAGGTTTAGGAAGAAATGG
AGGTTTccaagattttcacttttttcaaatttgggaTCATCTCGACCTTT
TTTAGTAGAATGCAGAAATTAATACATTGATGTTGTCTTTCGATGCAATG
TAAAGCTGTTTCGATAGATGTACTTCAATAAACTGAACGCAAGTTGTGTG
CTTATTTTACCACATCTTTCTAAAGATTTATCTTTCAAAGCTTATAAAAC
CCTTTTGTATGAAAATTGGTTTAAACGCTTGTCATCATTGCATACTGTAG
TGTACATATGACTCGTCATGGCATGTATTTGTCATTCTTATTTGCTCTAA
TACGATTATTCTTATAAACTTTTCATcaaactatcaaaatttgtcaaCGA
CATTCTCCCCTATCATATTTCTAATAGGTGGTAAAAACTTCCTACTCTTT
GAGCAGAAAGAGTTTCATTTCATGAGGGTTTTAAAAACGTATTTAACGAT
TATCGGCACCCCTGCATTCTTTGAATTTACTCTACTTTTTACATTTAGTC
GGCCAGTTTTGTATTTAATTAACATCATATCTTCTTGTAAAATTTCAGGC
AACATGCCATAAAAACCAATAATTTTTGGCTAAGCCTTGCctgttttgaa
aactttaaagatttttatctAATGAACAAACTTTTGTCGGCTGATATTTT
CGCGATTTCCAcgaatgtcgtaaatttcgcgatttttccacctcgcgaaa
gtttttgctcgcaaaagtttgaaCGCCTAAAGTAATTTCTGTAACCAGAG
GCCTAGATTGTTTTGGATTTTCTCCTTGATTTAGgccaatgtttgttttt
cttaattttctcatAAAAAGTGTTTATTACTTCCCTGTCAAGGGAAAGTG
ACCCAAATTTTGAGACGGTTCAATCTTTTCGCGATAAAAATTGATCCTGA
CTTTTCATCATCcgacaaaatattttccctATTAGAAAACGATTCCAAAT
TTTTCCCGGTATATATCTAACGCGATTGTTTTTCTCTGATATTTCATGCT
TATGCTCTTCATAATTCTGCTCTTTCGCAGTTGTTGGCCATTGAAATTCA
GGAAAGAATTTCTCCATCTTTACACAAATCGCTAGTTTCAATTATCACAT
TCTTGATAAAATCGTCCCGTGCAAGtttcattttccttgaagatgaactt
tttttttcattttttgtaggTTCCGCTTCAATTGAACCACTTCCAAAAAA
GGAACAACCTTCGGCCTTAATCATCGTCAACCACGAGGCTCTAGATCAAG
ACACCctctacaacaacaacaataacagcAACCAGACCTTGCAACAGGAA
CGTCCCATAACACCTGTTATTCGTGTGTGGGAAGGAGATTTCGAACTTGT
CGACCCGTGCAGTGGAAACAGCTTAGAAGCAGAATCGATCGTTGAAAATC
AGGGCGTTGAAACTCAATCAGCACCTGATAAATCGTTCTCAGCTTGGCAA
GAAAAGGAAAACGGTATCAACGTATCACACAAATCAACTTCAATGTCGAA
CCACGAAACTCTCGGATTGATGTCCAAAGATGCTGAGGACGAAGGAGATA
TAGAGCTTGATGAAATCGTCAGCTTTGATAGATCAACCGAAAGCAGTTCT
ACCGTCTTAGAGAAAGAAGGACTACTGAAAGCTACACAAAAAGATGATGA
TCAGGCTAGTTTATCTAGCCTGGAAGAACACCAAACACCCTCGTTTGCGT
CCTCCAGGCTTCGGACTTCGGTTGATAGCGTCCAGGAGAATTACACTCGT
CAGCATAGCGAACCAGTGGTTATAGAAGCAAgtgattttgttgttgaaaa
cTTATCCACTGTTAAAGAAACAAATACGAACATAAACAGAGAGGATCGGG
TTTCATCGACAAGCAGTAGCAATGTCAGCAAAACTGAATATCAACATGAT
AATCACAAGAGTCAAACATTTGTTAACGAAAACATTGAAATGTCTGAACT
AACAGTTGTCGAAGATAGAGAGGATTTGAGGAAAACATCTCTTGCTTCAT
CACATACTGATGAAGAAACACATCTATTTCAAACGTCAACTCCACATAGA
GGTTTGTCTCTcccttttgttgatttttaagatttgcTTTCGAGAACTTT
TAACCTTGCAAAGTACTACTTGCGATCCAGCTAGACGCTTTTATTAACAT
AGGATGGGATTCAAGGCTGGAAAAGTACAGATTTACTGTCGTATAGCAAT
AAAGATCAAGCAGATTTACGGCCTCAGCTCTAACTAATACCCTGTCTCGT
CTATCCGGTGAAAAGCCGCGCTAAAGCTATAAGAAGACAAGCTTTTCAAT
ATCCCTATCAACAAGTGAACTCATGTTTGGCCTACTAGTAGAGAACCTTC
CCTTTTTGATTTAAGATGATATCTATATTTAAAAGCTTGTCAGTGGGGTa
caatatttgttttgatttccaCtttttttCGTTATTATACATGAATCCCT
CTAAacgtcaaattttcattttgttcttcTCTCACCCTCGTTGATTTATA
AAGTTGTTACTACTATGCATAGTACtgcaaagaaaactttcaataaGATC
TCttgacagaatttttttttgacttttagcaaAGTTACAAGTGATttgct
gttcttataaaaatagttttaaaactaatggctttttaaataaaggtatA
AAAATTGATAGGAATTTTGGCTTAGATTAAAAAGATAACTTTTCTCTTTG
AACATTCTCTGCGATGCTTTTCGACGATTGTGTGTGAGAGAGAGATTAGA
TACCGACTTATATTTCCTTGTTTAGAGAGATGTGAAAGAGGATAGTACAT
TTGGAAATTCTTTCTAGGGAGTATAAAAGATTGGAGAAGATTCAAAGCAC
GTTATTTTATGAGATGTTCCAAAAAAGTTGATACAAAAACACCCGAATGA
TTGGTATTCTAGACTACCAAGTgatcttcaaaaagttttattttcccaac
tcaaaaaacaaaatttcaaatcttttttttttagataataCAGTGATGAC
GGACGTTGACGTGGTACAAGGTGTCCAAGACGTCTCTTACAACAACGACG
ACGACAATGTATCTGTAGCCTCCGAAACGTCTGAAGGATCTGAATTTCTC
GGTTCGTTGGGAATTTACATAGCTGAAGGGACTTGGGATTCCGACCTTCG
CGTTGATTTGGATTTACAACTAGGCCGCGATGAATGGCAAACTCGATTTT
CGAACATTGAAGGAGGT Coding sequence (CDS) from alignment at sc0000086_pilon:892781..897647+ >XLOC_037085 ID=XLOC_037085|Name=XLOC_037085|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2370bp|location=Sequence derived from alignment at sc0000086_pilon:892781..897647+ (Clytia hemisphaerica_ch_hm2_pilon)
atggGTTTGTCTGAACTGATCGATATGATGATTTCGCCTAAAATTTTATC
GCCcaagtttttattgaaagatggGTTTGTCTGAACTGATCGATATGATG
ATTTCGCCTAAAATTTTATCGCCcaagtttttattgaaaggTTCCGCTTC
AATTGAACCACTTCCAAAAAAGGAACAACCTTCGGCCTTAATCATCGTCA
ACCACGAGGCTCTAGATCAAGACACCctctacaacaacaacaataacagc
AACCAGACCTTGCAACAGGAACGTCCCATAACACCTGTTATTCGTGTGTG
GGAAGGAGATTTCGAACTTGTCGACCCGTGCAGTGGAAACAGCTTAGAAG
CAGAATCGATCGTTGAAAATCAGGGCGTTGAAACTCAATCAGCACCTGAT
AAATCGTTCTCAGCTTGGCAAGAAAAGGAAAACGGTATCAACGTATCACA
CAAATCAACTTCAATGTCGAACCACGAAACTCTCGGATTGATGTCCAAAG
ATGCTGAGGACGAAGGAGATATAGAGCTTGATGAAATCGTCAGCTTTGAT
AGATCAACCGAAAGCAGTTCTACCGTCTTAGAGAAAGAAGGACTACTGAA
AGCTACACAAAAAGATGATGATCAGGCTAGTTTATCTAGCCTGGAAGAAC
ACCAAACACCCTCGTTTGCGTCCTCCAGGCTTCGGACTTCGGTTGATAGC
GTCCAGGAGAATTACACTCGTCAGCATAGCGAACCAGTGGTTATAGAAGC
AAgtgattttgttgttgaaaacTTATCCACTGTTAAAGAAACAAATACGA
ACATAAACAGAGAGGATCGGGTTTCATCGACAAGCAGTAGCAATGTCAGC
AAAACTGAATATCAACATGATAATCACAAGAGTCAAACATTTGTTAACGA
AAACATTGAAATGTCTGAACTAACAGTTGTCGAAGATAGAGAGGATTTGA
GGAAAACATCTCTTGCTTCATCACATACTGATGAAGAAACACATCTATTT
CAAACGTCAACTCCACATAGAGgTTCCGCTTCAATTGAACCACTTCCAAA
AAAGGAACAACCTTCGGCCTTAATCATCGTCAACCACGAGGCTCTAGATC
AAGACACCctctacaacaacaacaataacagcAACCAGACCTTGCAACAG
GAACGTCCCATAACACCTGTTATTCGTGTGTGGGAAGGAGATTTCGAACT
TGTCGACCCGTGCAGTGGAAACAGCTTAGAAGCAGAATCGATCGTTGAAA
ATCAGGGCGTTGAAACTCAATCAGCACCTGATAAATCGTTCTCAGCTTGG
CAAGAAAAGGAAAACGGTATCAACGTATCACACAAATCAACTTCAATGTC
GAACCACGAAACTCTCGGATTGATGTCCAAAGATGCTGAGGACGAAGGAG
ATATAGAGCTTGATGAAATCGTCAGCTTTGATAGATCAACCGAAAGCAGT
TCTACCGTCTTAGAGAAAGAAGGACTACTGAAAGCTACACAAAAAGATGA
TGATCAGGCTAGTTTATCTAGCCTGGAAGAACACCAAACACCCTCGTTTG
CGTCCTCCAGGCTTCGGACTTCGGTTGATAGCGTCCAGGAGAATTACACT
CGTCAGCATAGCGAACCAGTGGTTATAGAAGCAAgtgattttgttgttga
aaacTTATCCACTGTTAAAGAAACAAATACGAACATAAACAGAGAGGATC
GGGTTTCATCGACAAGCAGTAGCAATGTCAGCAAAACTGAATATCAACAT
GATAATCACAAGAGTCAAACATTTGTTAACGAAAACATTGAAATGTCTGA
ACTAACAGTTGTCGAAGATAGAGAGGATTTGAGGAAAACATCTCTTGCTT
CATCACATACTGATGAAGAAACACATCTATTTCAAACGTCAACTCCACAT
AGAGataataCAGTGATGACGGACGTTGACGTGGTACAAGGTGTCCAAGA
CGTCTCTTACAACAACGACGACGACAATGTATCTGTAGCCTCCGAAACGT
CTGAAGGATCTGAATTTCTCGGTTCGTTGGGAATTTACATAGCTGAAGGG
ACTTGGGATTCCGACCTTCGCGTTGATTTGGATTTACAACTAGGCCGCGA
TGAATGGCAAACTCGATTTTCGAACATTGAAGGAGGTataataCAGTGAT
GACGGACGTTGACGTGGTACAAGGTGTCCAAGACGTCTCTTACAACAACG
ACGACGACAATGTATCTGTAGCCTCCGAAACGTCTGAAGGATCTGAATTT
CTCGGTTCGTTGGGAATTTACATAGCTGAAGGGACTTGGGATTCCGACCT
TCGCGTTGATTTGGATTTACAACTAGGCCGCGATGAATGGCAAACTCGAT
TTTCGAACATTGAAGGAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086_pilon | genome | sc0000086_pilon:892781..897647 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 955-1185:4637 |
| Aaloc | 73-951:2822 |
| Aaloc | 1-69:1 |
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