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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000091_pilon:647175..651862+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045868 ID=XLOC_045868|Name=XLOC_045868|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4688bp|location=Sequence derived from alignment at sc0000091_pilon:647175..651862+ (Clytia hemisphaerica_ch_hm2_pilon)
ttcagcatTACATCTAAACCTTATCCAAAAAATAAAGTACACTACTTGCT
ATAAGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCAGCAATTGT
TTTCTGAGGTGAGTTAGATTATTTTGAACCAAAGATCTTGCCTGGATCTT
TCACAGTTAGTTATCCATCGCTAGAGAGATTAGTTTcatagttttatttt
tctttttttttctcagacaacaattttgaaaaatgaccagTAGCAGTAAT
TTACTGACTTTACTAGTTGACTTTGAAAAcaacttatttttctttttagg
tgGTGGCAAAAAACCAATCTGAAATTACTACTAATTCCCAAGAAAAGGCT
AAAGATCAAACAAAGGCAAAAGATAAAAGGTTCAAATAAGTTTAATGATA
CAGTGCtgtatttgttttgttggtAATTGAAGTCCACATAGTCATAAGGA
GTAggaccattccagggcctagtACCTAAAGAAGAACTAGAcattttttt
tgggaaaggtTTATGTAAAAATGTTACGTTCAATTCATTAAGCACATTTT
ATAACTAACTTATTCATTATAGAAAAGACCACTGGTTATTTGCTGTTAGA
GAGGTATACTTTTGATAGACAttgtatttcattttcattcttttcattCG
TTTGAGTTGTTCATTAAAGAATATTGTTAGCTTTTCTTGAGACACtccaa
taattttgaaaacagACCAACCAAAATGCACCAGAAAGAAATTCTCATAG
GCTTTTCAACTCAtggctattttgaaaaaaaaaatttatttgattaatTC
TTTACAAATTGTCTCGAAATGGGCAGAATAGTGAAAGTTTTTTATGTCTG
CCCTTGGTGTTATTTTTGGGCCTGTTTAGTGGTATTTGCAGGTTTTGACG
TGTTTATAACCTCTATTAGCGTAAGCTCAAAATTGGGCAATGGCAAATGA
AGGGCCGGCGTTTACTTTGGGCTGGAGTAAGGTAGGCGGTAAATTACACT
TGACAGGAATAATATTTAATTTGTTAACTTTTGCTATAGGGTGCACCACC
AAAagagaaacaaaagaaatcactCGTTCAAAACGTGGAAGAGGTGACCG
AAGCTTTCAATGAGCTCGCCAAAAATATTCGAGAACATCAGGAGAGTATT
TCAAATGTGCATGGAGTAGGGACTATACATACTGATTTTGGAACGTTGGG
TACTGATGATGTCAAGACTCTCTTCAAAGATGATTGTCCacaattcaaaa
cttttttcagtGACGACTTTTTCAGAAGtgagttttatttaattttctgg
CTAAAATAAAGTAAGTCATTTGAAGGAATGTGTATTCCTTTTTAGTTCAA
AAGCGTAGGAAAGAACACTGGACTAATTTTACCATAATTACAAGAATATT
TTAACACTCTGCTGTGTATGCTACAGTTCTTTTACATTGTTACCCCTTCA
AACCCGAGTGACGTGTATACACGCTCCAAATTAGCAAATATACCGTGTTC
CAGACTTAAGGCTAAAACGCTttaccacttgatttaaaaggtCGTAACAA
GCTTTCCTGTCATGTcagtttgaagtttttaaaaaatttcacacttaaaa
aaaaaacgttgtgCACTGGAAAGGTTAATAAAAAACCAGTTTATGTTATT
ATCGACTGACTAATATTTCTACCATTTTAATTATTTCCAATAATAGCTAA
TATCGAAGTTCCGAAGCCGAAATTGACGGAAGTAGACCTCTCATCTTGGT
TGCAACCACAGCAACAACAAGGTTCGCGTCTCCGTCTACAACGTAAAGCC
AAAACAAAAGAGAAACGTTACGCTCAACTCATATCTGATGACGACGATGA
CGATTTTGAAGAAGTAACACCAagtaaaaagagaaagaaaactgaaaata
aaaattataacatCAATAATAAAGCTATTGTCCAGCATGAGGATGGTTGC
ATGAGTATTGATATCATTACcgatgatgatgaagatgaaaatcagCAAAC
AAACACCAAAAGTAAAGATGATCAGAACAGCATTGGATCAACTTtgacag
aaaaaatcaagaatgtAGTCAAGAGACCAATACAAACCATCACTGACATA
TGGAATAAGAAATCAGACACTAATAACAATGGTCAAAGTCACAATGATGG
TGAAGGAAGTCAAAATAGTATTCAAAGCAATGACAGGTATCCCATTTCAG
GATTACTCTcttaggtatataataaaaggCTGGTCAAAAATTAGTGACTA
AAATCACGCTGTTCAGAGAAAAgtaaatgaattttattttatcgCTGAAA
CGCTTCTTCAAATTGCGAGACAGGCGTCGTTCTGAATTAAACGTATAAAG
GTTTTCCATGTTTTATGggttaagttacgtaacttccaccattatggaag
caaacttTCGATTTGTGTAAGGAATCATCTCCTCAGATTGGAACGTTTGC
TTCCGTAATGGCGAGAGTTAGATTACTTAAGGGGGCCCCAGCGGcttgtg
tgaatgcgtgaatgcgtgaaaaatGCGTGAATTGGCAAGCTTTGCATGAA
CATGAATTGCGAAAAtacattgcgtgaatgcgtaaatttgggaaaaaaat
tgcgtgattgcgtgaattgaaggtccgctggagggggggCTCACTTAACA
AAACATGGTAAACCTCTACATGAACATTGTTGAAACTTTTGATTCTtgat
tcattcatcatttttctagtccaacaaaatcaaagaaagaaacgGAAGAG
AAAGTAGAATGTCCAATGTGTGCCAAGAAGTTCCCAACGAAAGATGTCAT
GGACCATGCGTTCTATTGCGATGGAGTCAAGGAAACTCGATCAACGAGGT
GAGTGCAATCTCTTGCTTTGTCCAAGCATTTACCtccacggggggggggt
ttcagggggtacccgattccgtaattccgccaattttttctccaatttcc
gtcaaaccgtcttaaattgaacaaaaattccgtcaccgaaaattcctttg
aaattcaatatttttgtcgaaaattccgcaaattttgaaaatcttttacc
aattccgaaattccgcaaatttttttgctaaattccgtttttccgcacta
aaattgtctaatttgccgtctccgtcagagaacccaatttccgtaattcc
gtctaaattttcgccaaattccgccactccgtccgaaaaaagggccgatt
ccgctcctccgccaaccatgaaaccccccccccctccactTTTTTCGGGG
AAAAATATCTTGAAACTTTTGCGAGTTAAAACCAATACAGACTTAGCTGA
AGACAGTTAAAACTTATCCAGTAGCCTCTTTTTCGTCATAGCTAAACTCG
TTCGGACTGTTGAATTACACTCTCCCTTTTTTGGTTTGAATCCATTGTCT
CCGCCAAAGCCCGCCCAGTTTTGTTTAAacacaaaaatagttttaaaaaa
attcaaagtgagGTTTAGTGGTTGTAGTACCAAGAGCTGTTACAATGAGT
TTCAAGGGAAATATTGGATTTAGTTTCATTAAATTTCTATTAATTTTATA
TTCCTTCTACATGAATCCACAATCTAGAATATTTAAGAGAACTGATCAAA
tacctttttgttttgttttaacagGTCGAGCTCCAACGGGAACGGTAATA
ATGATTAATTAGTTGAATCATCAgacatttttgagtatttttaagttttg
atcAATTGCGGTTTTAATATGTACTAAAGcctttgtttcaataaaaatct
tttatgGGTATTAATTTGACATATGAGAAAGTCCCGAATGttttaataca
cgtttttttttttaagaaactagttttaccaagcagcctcaatgtttctt
aagaaatcagccttttgagccttaaatgtttcttacatgtttctaaactt
tttgacataatcagcctatttttcatgttttgattggaaggttcttaaaa
aaacttcattttctcattttcagcctcagtatgtttcttagatgtttctt
agtttttaggcattctgagcctcatgtttcttaaaagtgtgtttcttaaa
aaaaaaaaacgtgtaaccaaTATGATCATTTCTAAAAGCCATAAGATTTA
CTCGACTTACTACAAGTTCATGGCTAAATCAACATTATGTCAATTAAGTT
TTCTAAAAGCTATACCATGGTTTCATTCATTTCAGCTTCAACGGGGGACT
ACCAAAACTGGGTGggtgcttgtcactcgttaaaTGAAAAACCTGCTAGC
AGTTCTGGAGCGTCAAATTCCAAGATACCAGTGGAACTACCtgaattttc
tggaaaaaagaagaaaaaaccatCAGAAAATTCGTTCCGTGGACCAAAAC
AACAATTTGCAGAACCGGCACCTCAACACCCTTATACTACAAACACTTCA
AATGTTTTTACAAAGTTAAAAGATGACGGACCCAAAGAACGAAACCCAAC
ATTAGACGACGGTTTTGGTGACAGTCAAGAGGATATTATAGCCGGTTATA
CGACTGTCCGCCATCGAAAACCAAATAGAACATACGGGCGTGGTGGTAGG
CGGAAGAACTATTTCGATCATGAGAATAGTCAAGGAGACGGTGGGACAAT
AAAATGCGCACGATGTAGTTTATCTGTTCCAGAGGAGAGATATAAAGAAC
ATACGGACAATTGTCTTAATGAATCCACTCTCTCATAA Coding sequence (CDS) from alignment at sc0000091_pilon:647175..651862+ >XLOC_045868 ID=XLOC_045868|Name=XLOC_045868|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3198bp|location=Sequence derived from alignment at sc0000091_pilon:647175..651862+ (Clytia hemisphaerica_ch_hm2_pilon)
ttcagcatTACATCTAAACCTTATCCAAAAAATAAAGTACACTACTTGCT
ATAAGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCAGCAATTGT
TTTCTGAGttcagcatTACATCTAAACCTTATCCAAAAAATAAAGTACAC
TACTTGCTATAAGTGATCAAAATGAGCCAAGACATTGATAATTCTCAGCA
GCAATTGTTTTCTGAGgtgGTGGCAAAAAACCAATCTGAAATTACTACTA
ATTCCCAAGAAAAGGCTAAAGATCAAACAAAGGCAAAAGATAAAAGgtgG
TGGCAAAAAACCAATCTGAAATTACTACTAATTCCCAAGAAAAGGCTAAA
GATCAAACAAAGGCAAAAGATAAAAGAAAAGACCACTGGTTATTTGCTGT
TAGAGAGAAAAGACCACTGGTTATTTGCTGTTAGAGAGGGTGCACCACCA
AAagagaaacaaaagaaatcactCGTTCAAAACGTGGAAGAGGTGACCGA
AGCTTTCAATGAGCTCGCCAAAAATATTCGAGAACATCAGGAGAGTATTT
CAAATGTGCATGGAGTAGGGACTATACATACTGATTTTGGAACGTTGGGT
ACTGATGATGTCAAGACTCTCTTCAAAGATGATTGTCCacaattcaaaac
ttttttcagtGACGACTTTTTCAGAAGGTGCACCACCAAAagagaaacaa
aagaaatcactCGTTCAAAACGTGGAAGAGGTGACCGAAGCTTTCAATGA
GCTCGCCAAAAATATTCGAGAACATCAGGAGAGTATTTCAAATGTGCATG
GAGTAGGGACTATACATACTGATTTTGGAACGTTGGGTACTGATGATGTC
AAGACTCTCTTCAAAGATGATTGTCCacaattcaaaacttttttcagtGA
CGACTTTTTCAGAACTAATATCGAAGTTCCGAAGCCGAAATTGACGGAAG
TAGACCTCTCATCTTGGTTGCAACCACAGCAACAACAAGGTTCGCGTCTC
CGTCTACAACGTAAAGCCAAAACAAAAGAGAAACGTTACGCTCAACTCAT
ATCTGATGACGACGATGACGATTTTGAAGAAGTAACACCAagtaaaaaga
gaaagaaaactgaaaataaaaattataacatCAATAATAAAGCTATTGTC
CAGCATGAGGATGGTTGCATGAGTATTGATATCATTACcgatgatgatga
agatgaaaatcagCAAACAAACACCAAAAGTAAAGATGATCAGAACAGCA
TTGGATCAACTTtgacagaaaaaatcaagaatgtAGTCAAGAGACCAATA
CAAACCATCACTGACATATGGAATAAGAAATCAGACACTAATAACAATGG
TCAAAGTCACAATGATGGTGAAGGAAGTCAAAATAGTATTCAAAGCAATG
ACAGCTAATATCGAAGTTCCGAAGCCGAAATTGACGGAAGTAGACCTCTC
ATCTTGGTTGCAACCACAGCAACAACAAGGTTCGCGTCTCCGTCTACAAC
GTAAAGCCAAAACAAAAGAGAAACGTTACGCTCAACTCATATCTGATGAC
GACGATGACGATTTTGAAGAAGTAACACCAagtaaaaagagaaagaaaac
tgaaaataaaaattataacatCAATAATAAAGCTATTGTCCAGCATGAGG
ATGGTTGCATGAGTATTGATATCATTACcgatgatgatgaagatgaaaat
cagCAAACAAACACCAAAAGTAAAGATGATCAGAACAGCATTGGATCAAC
TTtgacagaaaaaatcaagaatgtAGTCAAGAGACCAATACAAACCATCA
CTGACATATGGAATAAGAAATCAGACACTAATAACAATGGTCAAAGTCAC
AATGATGGTGAAGGAAGTCAAAATAGTATTCAAAGCAATGACAGtccaac
aaaatcaaagaaagaaacgGAAGAGAAAGTAGAATGTCCAATGTGTGCCA
AGAAGTTCCCAACGAAAGATGTCATGGACCATGCGTTCTATTGCGATGGA
GTCAAGGAAACTCGATCAACGAGtccaacaaaatcaaagaaagaaacgGA
AGAGAAAGTAGAATGTCCAATGTGTGCCAAGAAGTTCCCAACGAAAGATG
TCATGGACCATGCGTTCTATTGCGATGGAGTCAAGGAAACTCGATCAACG
AGGTCGAGCTCCAACGGGAACGGTCGAGCTCCAACGGGAACGCTTCAACG
GGGGACTACCAAAACTGGGTGggtgcttgtcactcgttaaaTGAAAAACC
TGCTAGCAGTTCTGGAGCGTCAAATTCCAAGATACCAGTGGAACTACCtg
aattttctggaaaaaagaagaaaaaaccatCAGAAAATTCGTTCCGTGGA
CCAAAACAACAATTTGCAGAACCGGCACCTCAACACCCTTATACTACAAA
CACTTCAAATGTTTTTACAAAGTTAAAAGATGACGGACCCAAAGAACGAA
ACCCAACATTAGACGACGGTTTTGGTGACAGTCAAGAGGATATTATAGCC
GGTTATACGACTGTCCGCCATCGAAAACCAAATAGAACATACGGGCGTGG
TGGTAGGCGGAAGAACTATTTCGATCATGAGAATAGTCAAGGAGACGGTG
GGACAATAAAATGCGCACGATGTAGTTTATCTGTTCCAGAGGAGAGATAT
AAAGAACATACGGACAATTGTCTTAATGAATCCACTCTCTCATAACTTCA
ACGGGGGACTACCAAAACTGGGTGggtgcttgtcactcgttaaaTGAAAA
ACCTGCTAGCAGTTCTGGAGCGTCAAATTCCAAGATACCAGTGGAACTAC
CtgaattttctggaaaaaagaagaaaaaaccatCAGAAAATTCGTTCCGT
GGACCAAAACAACAATTTGCAGAACCGGCACCTCAACACCCTTATACTAC
AAACACTTCAAATGTTTTTACAAAGTTAAAAGATGACGGACCCAAAGAAC
GAAACCCAACATTAGACGACGGTTTTGGTGACAGTCAAGAGGATATTATA
GCCGGTTATACGACTGTCCGCCATCGAAAACCAAATAGAACATACGGGCG
TGGTGGTAGGCGGAAGAACTATTTCGATCATGAGAATAGTCAAGGAGACG
GTGGGACAATAAAATGCGCACGATGTAGTTTATCTGTTCCAGAGGAGAGA
TATAAAGAACATACGGACAATTGTCTTAATGAATCCACTCTCTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000091_pilon | genome | sc0000091_pilon:647175..651862 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1099-1599:4188 |
| Aaloc | 1078-1095:3626 |
| Aaloc | 949-1074:2721 |
| Aaloc | 460-945:1699 |
| Aaloc | 220-456:1040 |
| Aaloc | 190-219:574 |
| Aaloc | 109-186:300 |
| Aaloc | 1-108:1 |
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