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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000566_pilon:58580..61293+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023630 ID=XLOC_023630|Name=XLOC_023630|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2714bp|location=Sequence derived from alignment at sc0000566_pilon:58580..61293+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAAGTTTCTTATCCACTACTCTCTACTACGAGATTACATGAACCA
TTTTCTGCATGGAAAAAGGTTAGAATAATATTTCAAaccttttttccttt
taaaataatagaaattGACAAAATAGTTTTGTCAAAATAGTTACTCTTTT
CACAAAACAGCGATTGTAAATTTCTCATAAAGATTTTCAACGTAATATGT
TATAcctttgataaatttttaattgTGTTACTGTATTATTTTTCAGTTGT
ACACTTGATGGTTACTTCAAGATCTTTTGTTTGACGCAAAAAAGCTCTGG
TCATCACAAAGTCGATCTGACTTACAAGGATTTTAAAGATTCTTGGTATG
GCTTTTTAAGTTTGCTGGAGATTGATTTTGCGGCTGGATCAGTATGTGGT
AAATGTGGAACAGAACCTGAGCATATTGTATGCGATGCCACAGGATTGAG
CCACCAGAAGAAATTTTCAACACTGGCCTTACAAGAAAGACCCTCAAATA
TATACATACCAAAGTATTCGTATGTACTGCGTTTTTTGTTTTATACCCTT
ACGATTTTCAGTCTTCTTGATAAAATCAACTTCTGTTTGGACCACCAAAA
ATTCAACGAGACCTTCAGTttaacttttaacttttcgTCTTGTgctctgt
atttcaaaagttcaTCGATTAAATCATCTTTAGTTTCAAGTTGGACATCG
TCAGAACTTATGcccttttttaatttgtatAGCGTAACATGTTTCAAACT
ATTATACGAGACAACTGAAATTTTTCCGCTTTAAAACTACACGctaattt
aataattttttactttttcatacgGTATTTAGAAAGAATTGGAACTTATT
TTTATCACCTTAGTGAACATGCTGACCGGCTGGCCATTAAAGAGAAAGTG
TTAAGAGACTCTTTTAAAGACTGGGCAACAAAATCAAAGTCTGTGACTTT
CATGAAAGGGATGAAAAAATTGTACCCTACTATACACCACGTAATCGAGT
GGTCAATCGACACGTTTGGAGATGATATTCCAAAAGCAATGAGATTGTTT
TTCCGTTGCCTTTATTCGTCCAGTCCAGTTTGCTCATATTTTGAAGAACG
TGATTTGGAATTGAGTTTGAAGTTGCTCCAACCGAATTGTAAAAGTGATT
CGAGACTTATGAGGCAATTTCAAATTCGACTGCCACTTTTGTTCAACGTG
TTGAACGCTGCTAATCTGGAATCCTGTCTCCCTGAAACGAAATGGAAAGG
ATTACTGCTTTACCTCGCTGACAAGGCTGAAGTTCCTTTCAATAATGCCA
AGGATTTGAGCACCTCCGATGAATTCGATGAGAATGAACTCAGCAGGTAT
CATCGACAGTACTATTAGTATGATACCATTTTAACTTTAATTGTACATTT
TAAGTTTCTAAATATGTTTTCTACTGTACTAAGCCCTGATTGTTATTATG
TAATCACGTGTGGAGGATAGCTTTTGTAGATTTCCGTCtatttttcatgt
attgctttaGCTTTCCAAATCTACCAATCCGAAGATCGAGGGGCAACTTC
GAACAGGACAAACGCAACCTTAAATACGATAGTTGCAGGAAAAATTATAA
AGGGCACCCAAACTTGACATCTGGAATATTCACGATATATTGTCCACATG
GTatgtttatattatatatatgtATGTGTACAACTTCTCCAAACTATTTT
AACTTCGTAGAATTGGTATGATATGGATTCTATGTGCGATTAAATatcac
aatattttcttttggtTTAGGCATATGCTACGGTTTCCAAGTTATGGCTA
AGGAAGAATCTCCCAATGTGCCATTCACCATATTCAGGACAAGGTTTCAA
AAATGTAAGCTTTTGTATGCTAAAAGTAAAATGCCCGTATCTATCAAATA
AAGGATAATTAATGTTTCACTTTAACTTTGTATTATGTGCAAACCCCTCT
TAATTAAGGTTTCTCAGGAAATTAGACCAAAACACTcgcaaaatgctgaa
aaaagagcttCTTTAAAAAATGTTTTATagtattttgtattttattttcc
aaacctTTTGCAGTGCACATAAATTGTTTACAGAATGTATGTTCACTTTC
CTAAACATTTATTTTCAGCACCTCGATACATAGTATACGACAATAATTGT
AGCCTTCACGCATATTGTCTCAATAGAGACCCAGTATTCTTTCGCGAGAC
CAAGTTCCTTGTCGATCGTTTCCATTGGAAGAATCATACTGGTAAGAACA
GCATTTACTACGTGGTTGATTCTTATTTTTGGTGTAGTGAAGTTCTATTC
AGTTCGTCATCGATAGTTTTAATTGAAACATAAGATTGTGGGTGTTTATG
GCCATCAGTCAATTAGTGAATTTTAATAATCTTTTCGTGTTATTCAACTC
AATAAGCCTAGTTGCCCGGAAAGAggagaactttttttcaaaaatctact
ttATCATTTTGAATAAAGCTTCAAATTATGCATAAGATATTACATAaatg
gatttttcaaatttcaatttcagctTGCGGTACAGGCTATTGCATGAACA
TCTATCATGAACTGGAATGGCTAAATAGCCAGATCAACGAGCAGCAAAAT
GCTTCTACTAAACGTCTAAAAACACAGCTTTCTTACATGCGACCTGACCA
TTTTATGTCGCATTGTAAGTTTTTCCTATGGTATCGAAATTCATTGAAAC
AAGACTTGCTGTAG Coding sequence (CDS) from alignment at sc0000566_pilon:58580..61293+ >XLOC_023630 ID=XLOC_023630|Name=XLOC_023630|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2724bp|location=Sequence derived from alignment at sc0000566_pilon:58580..61293+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAAGTTTCTTATCCACTACTCTCTACTACGAGATTACATGAACCA
TTTTCTGCATGGAAAAAGATGGGAAAGTTTCTTATCCACTACTCTCTACT
ACGAGATTACATGAACCATTTTCTGCATGGAAAAAGTTGTACACTTGATG
GTTACTTCAAGATCTTTTGTTTGACGCAAAAAAGCTCTGGTCATCACAAA
GTCGATCTGACTTACAAGGATTTTAAAGATTCTTGGTATGGCTTTTTAAG
TTTGCTGGAGATTGATTTTGCGGCTGGATCAGTATGTGGTAAATGTGGAA
CAGAACCTGAGCATATTGTATGCGATGCCACAGGATTGAGCCACCAGAAG
AAATTTTCAACACTGGCCTTACAAGAAAGACCCTCAAATATATACATACC
AAAGTATTCTTGTACACTTGATGGTTACTTCAAGATCTTTTGTTTGACGC
AAAAAAGCTCTGGTCATCACAAAGTCGATCTGACTTACAAGGATTTTAAA
GATTCTTGGTATGGCTTTTTAAGTTTGCTGGAGATTGATTTTGCGGCTGG
ATCAGTATGTGGTAAATGTGGAACAGAACCTGAGCATATTGTATGCGATG
CCACAGGATTGAGCCACCAGAAGAAATTTTCAACACTGGCCTTACAAGAA
AGACCCTCAAATATATACATACCAAAGTATTCTGAACATGCTGACCGGCT
GGCCATTAAAGAGAAAGTGTTAAGAGACTCTTTTAAAGACTGGGCAACAA
AATCAAAGTCTGTGACTTTCATGAAAGGGATGAAAAAATTGTACCCTACT
ATACACCACGTAATCGAGTGGTCAATCGACACGTTTGGAGATGATATTCC
AAAAGCAATGAGATTGTTTTTCCGTTGCCTTTATTCGTCCAGTCCAGTTT
GCTCATATTTTGAAGAACGTGATTTGGAATTGAGTTTGAAGTTGCTCCAA
CCGAATTGTAAAAGTGATTCGAGACTTATGAGGCAATTTCAAATTCGACT
GCCACTTTTGTTCAACGTGTTGAACGCTGCTAATCTGGAATCCTGTCTCC
CTGAAACGAAATGGAAAGGATTACTGCTTTACCTCGCTGACAAGGCTGAA
GTTCCTTTCAATAATGCCAAGGATTTGAGCACCTCCGATGAATTCGATGA
GAATGAACTCAGCAGTGAACATGCTGACCGGCTGGCCATTAAAGAGAAAG
TGTTAAGAGACTCTTTTAAAGACTGGGCAACAAAATCAAAGTCTGTGACT
TTCATGAAAGGGATGAAAAAATTGTACCCTACTATACACCACGTAATCGA
GTGGTCAATCGACACGTTTGGAGATGATATTCCAAAAGCAATGAGATTGT
TTTTCCGTTGCCTTTATTCGTCCAGTCCAGTTTGCTCATATTTTGAAGAA
CGTGATTTGGAATTGAGTTTGAAGTTGCTCCAACCGAATTGTAAAAGTGA
TTCGAGACTTATGAGGCAATTTCAAATTCGACTGCCACTTTTGTTCAACG
TGTTGAACGCTGCTAATCTGGAATCCTGTCTCCCTGAAACGAAATGGAAA
GGATTACTGCTTTACCTCGCTGACAAGGCTGAAGTTCCTTTCAATAATGC
CAAGGATTTGAGCACCTCCGATGAATTCGATGAGAATGAACTCAGCAGCT
TTCCAAATCTACCAATCCGAAGATCGAGGGGCAACTTCGAACAGGACAAA
CGCAACCTTAAATACGATAGTTGCAGGAAAAATTATAAAGGGCACCCAAA
CTTGACATCTGGAATATTCACGATATATTGTCCACATGCTTTCCAAATCT
ACCAATCCGAAGATCGAGGGGCAACTTCGAACAGGACAAACGCAACCTTA
AATACGATAGTTGCAGGAAAAATTATAAAGGGCACCCAAACTTGACATCT
GGAATATTCACGATATATTGTCCACATGGCATATGCTACGGTTTCCAAGT
TATGGCTAAGGAAGAATCTCCCAATGTGCCATTCACCATATTCAGGACAA
GGTTTCAAAAATGCATATGCTACGGTTTCCAAGTTATGGCTAAGGAAGAA
TCTCCCAATGTGCCATTCACCATATTCAGGACAAGGTTTCAAAAATCACC
TCGATACATAGTATACGACAATAATTGTAGCCTTCACGCATATTGTCTCA
ATAGAGACCCAGTATTCTTTCGCGAGACCAAGTTCCTTGTCGATCGTTTC
CATTGGAAGAATCATACTGCACCTCGATACATAGTATACGACAATAATTG
TAGCCTTCACGCATATTGTCTCAATAGAGACCCAGTATTCTTTCGCGAGA
CCAAGTTCCTTGTCGATCGTTTCCATTGGAAGAATCATACTGctTGCGGT
ACAGGCTATTGCATGAACATCTATCATGAACTGGAATGGCTAAATAGCCA
GATCAACGAGCAGCAAAATGCTTCTACTAAACGTCTAAAAACACAGCTTT
CTTACATGCGACCTGACCATTTTATGTCGCATTGTAAGTTTTTCCTATGG
TATCGAAATTCATTGAAACAAGACTTGCTGTAGctTGCGGTACAGGCTAT
TGCATGAACATCTATCATGAACTGGAATGGCTAAATAGCCAGATCAACGA
GCAGCAAAATGCTTCTACTAAACGTCTAAAAACACAGCTTTCTTACATGC
GACCTGACCATTTTATGTCGCATTGTAAGTTTTTCCTATGGTATCGAAAT
TCATTGAAACAAGACTTGCTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000566_pilon | genome | sc0000566_pilon:58580..61293 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1174-1362:2526 |
| Aaloc | 1051-1170:2121 |
| Aaloc | 967-1047:1773 |
| Aaloc | 826-963:1512 |
| Aaloc | 343-822:865 |
| Aaloc | 70-339:248 |
| Aaloc | 1-66:1 |
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