|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1380643..1387339+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037812 ID=XLOC_037812|Name=XLOC_037812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6697bp|location=Sequence derived from alignment at sc0000007_pilon:1380643..1387339+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCACGCTGGAGGATAAACCTGAAGATGAGAAAACCAAAGAACTGTC
AGTTGCACAGAAGGTCCGTATGGAGCGCAACCGCCAGCGTGCCTTGTTGC
TCCGTTCTTCAAGGTTAACAAGTCACCCATATGCCAGTGAGGAGGCGAAG
ACAGTGCACGTAGGAGGGTCAAGTGTCGTGGATAGTGGTGGAGGTTTCTT
CAtcgatgaagatgaaaatgaagaagaagaaatggtCAACGCGGCTGACT
TGCCCAAACAACCTGGTAAGTTTTCTCACTGGTTAACTCTCCCTTTCGCA
TCACAACCAGACACAATAACACACAGGTGTCAGAAATATAAATACTATGC
TTGAAATTATACAATTTAGCCgttgtcttattttttaatttgaccTGCTT
TTTTAAGAGAAACTGCGATTATACATTATTCATCTTTATATTTTAGGTCC
TATCATAGATGGTAGTGAAGATCTGTGTGAAGATTGTCACAAGAAATTTT
CCGACTCCTATTTGTTGAAACATTTTGATGTTCAAGTTTGTGATGCGTGT
AGGTTAGTTTGCTTTGTTATCTTTACTTGATTCTAGATTCCAAAATTTAT
CTTAATAATATCTTAGAGTTAAGTCCAAAGCACGTGGGCACGGGTTGATT
ACCAATTTGTTctagtaaatgaaaaaagaaacgtCTCTAAGAGAAGTAAA
TTCCTTTTCTCTTTATGATTTATAAAACAGTAATTTCTGATCTGCGAGGG
AtttttttGACTAGAGTTGTAAAAATCCATGCGTAATCTATCGAATTTTT
CGATTATCGAATtaatcgaaactaatcgaagCTAATCGAAGCCATTATAT
TTCGATTAGTCGAAATAATCGAAGcctaatcgaactaattgagataaaaa
aaaccttggaaaattcgattaattcgataaATTTGATTGGGCTTCGATTA
GCTTCGATTATCACTCGATTAGTTTCGATTATCcttcgattagtttcgat
taTCCTTGAATTAGTTTCGATTATCCTTCGATAAGCTTCGATAAGTTCTA
TTCCCCAATCTTCTTTTTTGGATTCATGTCCCATTCATGTTCAATGGATG
GTCCGCTCAACGAtgtgtaaagcccgaagggctagatctctagcttttgc
tgaaaattgtGTCGAAGTTAGATAGGAAATCCTaactaagtcacgtgaca
ttataatagaatttcagcgcttgaccaatcagaagcttagCCAATTTTCG
GAAACAATAGCAGAAATACTTTTTCCAATATGtactcactttttttcttg
cttaaCCTGAGAACAGATTGtaattgttttctgcccaccacgctgaagct
ctaaagggatgggcgaaaacaaacaatctgacgactTTGTTGGACGGATT
CATGCGAGACCGCGTTCAAAACATCCTGGAAACTAGCGACACcgcttcaa
aatttgttttgattttgctgcAAAGGATTATGGGTAGATTATTTTTGATA
GATTTGGCGGGTGAGAAATGGCTCAAATGGGGACCCGTTTTTACAACGAG
CACCTTGTTGTAAAACTTTCAAAGCGGTATGGCCAATGTCCACAGATGTA
TATTTCGCATCGTACCtttagagcaaagcgtgtcgatAGCGAAATTCACA
TCTGGAGCAGGTAATTtcttgcttggaagagcttgaAGCACGAgatttag
cccttcgggctttacagaaatctgtgggtccgctcctttagagctttacc
tatcaggggggagggggtcggGCTCAAAATCGGTGAAACGATAAGGCATC
CTGGATGACCGTCCGGCCGTCACACGAACCATTCGGCCGTTTAACCGAAA
CGAGCAGCCGGCCGTCGAACCGAGCATCAGGCCGCCGTACCGAGCATCCG
GCCGTCGAACTGAACCTCCGGCCATCGAACCAAGCACCTGGCCGCCGGAG
CGTGCGGCCGCTAGCCcgcggggtccacttaaagcttttttatagacttg
cTTAggtggactgtaaaacagtcctgtagattttagttgtttttggaagg
taagaACAGgataaagcaatgtttttatttgcaATACGGTATTGCAAATC
TGCTGCTGGTattgatattgatgatataGATGCTTCTCATTTTTAAACTC
CAAGtgctccaagtagtttttttgtgaattggatttttagtgtttttctt
aaaaaatggcgacctcgtcaaatgctcctagtctacttcactggactcag
cgtcatatcCATTGCGGTAATCTCATAACAGAACACGAATATTCTGCAGG
CGTCAGACGCGggaaaaactttgaagatagaaaataaagaaatttatcAT
TTTGGTACTTTGCATCATACTTACACGGTGTAAAAATGGACAAACTAAAT
TAAAATAcagcaagttgataaaaacaTAATGTGTAAGACTTTTAAATTTA
TATAACTTGTAACTGTAAAATAAAAGCCGAAGTTGGCAACcttcataaat
aaaaaataaaaatgttggtTGATTCAGGTTGATTTgacttgaaaaagatt
gaagtGCCCAAGGTTATatgcttaaaaaaataaaaaaaatgtctaTTTAC
GCGATTCTGCCTCCCGTAGTAAAGCAATCAAACTTTTCTTTGATGCGTTT
TTGCGAAACTTAATGTTCATAGAGATCAGTTTGAGTTTCATGAGCTGAAC
ATCCATTTGCTCGTTGTCTGTATTTTTTGGGGGGACAGCGGCTGTAGCTT
TTGATGCTAACatgtcatttttctttttttctagagCATCCAAGTCCGTT
TGTCCTAGATGTCCGTCGAACCTTTGCACCAACTCAACCCCTTTGAACAT
TTAATATGTGATTGATTTCGTTGGTTCTAGTGTTGGTGAAGGAGCATTTG
ATGACAGAGAAAGACACCGAACaaaaaaactgatatttttcaaattgcta
ATTTCAGCCTCGACAGCTGAATGAGCTGTTTTTGTACCGTACCGACGAAT
AATTCGAACAACTTTACCATATGTAAATTGACGCGATTTTGTGTCTAAGA
AACAGCATTCATCGTTGATTTTGATGTTGGTTTCGAGCGTTGAGGTGTTG
TTATTGAGCTGCTCAAAAAACGAGGTTTGGTTACTTGATTTCCATCTTTC
CATTCTGCTCGCAGCTGGGCAATAAATTTTGCCGTCAGTCAGAGACAGAA
ATCGAGCAATATGATAGACTGTACCCTCGTATTCTACATACATTGGGTTT
GAGCGGTTTGttcgatttgttgattttcttgtgTTGGCATTTGATCCTTG
GTCCAGGAGATCTTTCATAGTTAAATTGGAATCATTCGCTAAGCAGTTGG
TGCTTCAAGAGGTATATCCGTTCTAGAAATGAAACAACACAGCATTGAAA
GTTGAATGTTACCTCTCGACCCAGtggtaaaaaaacaaacaaaagaaatg
gaaatacagtcaagcaaactactgaaatacgataaaaaataatGGACTTT
CCTCGCTTTCCTAACCCTGCTGGAAGAAATGCAACCCAGCTCGAAAAAAC
TTTCATCACATGTTATGAAACCCATTACTAGTAACAATATTGATTGAATA
GTTTGAagatagtttgttcttatataaaaaaacgtgtatgaattTTTGGG
ACACTGTAAAGTTTTTCGGGATTCCTTATAGTTAATATATATCAGCACAG
TCTTTTGGCATGTTTCTTGCAAGTGTGCTTTTTGACTAGAGTAGGCCAAG
TTCTGTAAAACCGGGGTATAcatcttttatttcaatttctcacCCGGGTT
GAGATTATTCAGCTTCAATTTTCTGGGGTGGCTGGGTGATTTCTTCCCTC
GAATAGGCAAACACAAATTATTCTGCCATAGAATGTAAAGATTTTTAAGC
ACCACACAAAACCATAGAACGACGACGAGGGACCGATAACAAACACCAAA
ATGTTCATCACCAGGCTCGGAAGGTAAAAAGATCTTTCACGGCTATCAGA
TTTTAACCAAATTTGACCCGATAATACCTTGAGGGaagaaatttaatttc
acggttGAGAGAATTTTCTGTTCAAAATATGGcttattttgccctaaaaa
taccaattttcgggtaatttctttcaatcataaaaatatttgtgtttccc
GGATTTGCCAAAAAAcagcgaaattaaattctgctaaaatttcttcccgc
caaaaatttcttcccttaaggtattccAAAATCTCCTATTTATTGCACGT
ATTGGCCTTAATATTACGGTCGAATTTTAATCGAAAAGTCATTGCTATCA
AGTAAAAGCTGTTGAGTATTGCTTCAACGGTCGTACTTAGCATAAATCTT
CTGATTTCTGCATTGCCTTAAATTGCCACGGCACTCCTTTCCAATGCGAA
TCGTAGACTAGAAAGAAATAGAGAAAGATGTCACAATATAGCGTGCTTGA
CTATCACCACACATGAGTATGATTACtgtacgtgatttggaaatttcctC
TAACAAATCGAGCTTCAGGCCCCAGTCATCCCTGAGTTGACGATAGGTTT
TTATCCCAATTTAAAATCACCGAGGAACCAAATCGTGGAAAGTTCTGTGG
TTCACACATTCATCACATTTTTTCACGATCGGCTTACGACGGTTCGTCTG
TTCACTTGTCAAGCGCCCTTTTAAAAATGAGTGATTTGCCGCCTGCTGAA
ACGCCTGCAGAAAAACAAGCCAAACCTAATCAGAACGAAGAGAAGCGCGG
TGAATGTTCCGAATGTTATATATTATTTTCCATTGCGTCTTCGATGTTTT
GTTCTCTTCGATTGAAgtctaaaaaaagagaaaatatgatAAAGATCAAA
CATTAATCAAAGCTATCGAACACTTATCGAAGCTTATCGAAGATTATCGA
ATCTTAATCGAAACCTATCGAAAGTTAATCGAAGttatcgaacataatcg
aatatatCGATATTAATCGAAGCTATCGAACATTAATCGAAGCTTATCGA
TAGctaatcgaagtaatcgaatggtaatcgaactaattgagaaaaacctt
ggaaaattcgattaattcgattacgGCTCGATAGTTTCGATAAATTCGAT
TTAAAATCGaattcgattttgttcgatagATTACGCCTGGACTACACTAA
CGGACTTTACATACATTTTATCTGAATTCTACCAAAAGTTAACCAATCGA
GACGCAACCTTTGCTTTCATTTTAGAAGTTTGCAGAAAGACGAAGCGTAC
AAAATGATTACAAAGACTGATGCAAGACAGgtatttacaattttcatgtg
tctttttttgcttttcgTTGCCCTCTCTCGAGGTTATCAGCTTTTTGCAG
TATATTAATTTGAAACCTATTAACCAATATTCCGtctcaattttagaaat
tttgtctGAAAGATTGCGATTTCGACATTCGAGAGCCTCCATTGAAGTTC
ATcgttcgcaaaaatcctcataATGATCGCTGGGGTGACATGAAGTTGTA
CCTGGAACTGCAGGTGAAACCTTTCTTTGCGTAAACTCCAATAAAATTCC
AAACAGAAAGAACTAGAAAGCGACAATAAAACTTGCATATTTTGCACCGT
ATAATGCcgtaaaaaattaataaaagagATACACAAACAGAAACTAGTGA
AAATTAATCAATTACACCGATAATTTGGAATTCTATTTTGTTATTCATTC
TAACTTTCTCATTTTGTATCAGGTTCACAAACGCGCCATGGAGGTCTGGG
GTGACGAAGAGACACTGGAGGagcaaaaagaaaagagaactgataataaa
gaaaaagctaaaaggaaaaaatatgaaaaacgaATCAAAGGTTTGTGACA
GAggttatacatgtttttttagaaGCATTGTTGCATAAAAATTTTAAGCA
TATCCTAAGCATTATCTGAGCCTATATTATCCGGCTGGAATTTACCTTAA
ATTTTGCTTAGTTcgagcaattttcagccttgtcaATCTCTTGATCTAAG
CATCTCCCAGccagtttttgaatttttgtatgcttatacaAAACTTGTGC
TTTTGGTAACCTCATTTGGTGGCTTTCATTGATTGAGCCGTCAACTCGTT
TTCAACTTGTCAACTCCTACTGGAGTCTTTTTCATGCTTTACGAATATGT
TAGGGGTTAAATGACATGATGATTAATGTGACGGGGAAGTATTGGATACA
TTAAACTGTACTTGACGTTCTTCAACAGTTTGCCCTACCGTTCTCTACTT
TTTCGTAAATTGGGCAGTTTCAAGAAAACACCATTACTTCTGTGGACGAc
tggggaaattttgaaaaggttCCGGAAGATGCAGGATTTTCCTAATTATT
TGGTCATCCGCATCAAAAAGATCTTGAATGTTACGGAAATCATaaagttt
ttcataatttaGTTGTTAcggaaaatccattttttccaCAGGGGGGTAAC
GGACTATAACTGGAACCACCCATTTAGCCTAGACTACCAAGTCTTCTGAT
AGAATTATTGTTTACCATATTATTCTCTATCGGATGTAGAACTTCGAAAA
GCAGTACGTACAAGCACTTGGCAGAAGGACTTGTCGAAGCACGTGCACGA
CTATGATTCTGCGAACGAGGTTTACGATGAAGAAGAGGACGTCTATACAA
AGAAGTGTAAAACATGTGATCATCAAATTACTTACGAGAAGATGTGA Coding sequence (CDS) from alignment at sc0000007_pilon:1380643..1387339+ >XLOC_037812 ID=XLOC_037812|Name=XLOC_037812|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1638bp|location=Sequence derived from alignment at sc0000007_pilon:1380643..1387339+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCACGCTGGAGGATAAACCTGAAGATGAGAAAACCAAAGAACTGTC
AGTTGCACAGAAGGTCCGTATGGAGCGCAACCGCCAGCGTGCCTTGTTGC
TCCGTTCTTCAAGGTTAACAAGTCACCCATATGCCAGTGAGGAGGCGAAG
ACAGTGCACGTAGGAGGGTCAAGTGTCGTGGATAGTGGTGGAGGTTTCTT
CAtcgatgaagatgaaaatgaagaagaagaaatggtCAACGCGGCTGACT
TGCCCAAACAACCTGATGAGCACGCTGGAGGATAAACCTGAAGATGAGAA
AACCAAAGAACTGTCAGTTGCACAGAAGGTCCGTATGGAGCGCAACCGCC
AGCGTGCCTTGTTGCTCCGTTCTTCAAGGTTAACAAGTCACCCATATGCC
AGTGAGGAGGCGAAGACAGTGCACGTAGGAGGGTCAAGTGTCGTGGATAG
TGGTGGAGGTTTCTTCAtcgatgaagatgaaaatgaagaagaagaaatgg
tCAACGCGGCTGACTTGCCCAAACAACCTGGTCCTATCATAGATGGTAGT
GAAGATCTGTGTGAAGATTGTCACAAGAAATTTTCCGACTCCTATTTGTT
GAAACATTTTGATGTTCAAGTTTGTGATGCGTGTAGGTCCTATCATAGAT
GGTAGTGAAGATCTGTGTGAAGATTGTCACAAGAAATTTTCCGACTCCTA
TTTGTTGAAACATTTTGATGTTCAAGTTTGTGATGCGTGTAGAAGTTTGC
AGAAAGACGAAGCGTACAAAATGATTACAAAGACTGATGCAAGACAGAAG
TTTGCAGAAAGACGAAGCGTACAAAATGATTACAAAGACTGATGCAAGAC
AGaaattttgtctGAAAGATTGCGATTTCGACATTCGAGAGCCTCCATTG
AAGTTCATcgttcgcaaaaatcctcataATGATCGCTGGGGTGACATGAA
GTTGTACCTGGAACTGCAGaaattttgtctGAAAGATTGCGATTTCGACA
TTCGAGAGCCTCCATTGAAGTTCATcgttcgcaaaaatcctcataATGAT
CGCTGGGGTGACATGAAGTTGTACCTGGAACTGCAGGTTCACAAACGCGC
CATGGAGGTCTGGGGTGACGAAGAGACACTGGAGGagcaaaaagaaaaga
gaactgataataaagaaaaagctaaaaggaaaaaatatgaaaaacgaATC
AAAGGTTCACAAACGCGCCATGGAGGTCTGGGGTGACGAAGAGACACTGG
AGGagcaaaaagaaaagagaactgataataaagaaaaagctaaaaggaaa
aaatatgaaaaacgaATCAAAGAACTTCGAAAAGCAGTACGTACAAGCAC
TTGGCAGAAGGACTTGTCGAAGCACGTGCACGACTATGATTCTGCGAACG
AGGTTTACGATGAAGAAGAGGACGTCTATACAAAGAAGTGTAAAACATGT
GATCATCAAATTACTTACGAGAAGATGTGAAACTTCGAAAAGCAGTACGT
ACAAGCACTTGGCAGAAGGACTTGTCGAAGCACGTGCACGACTATGATTC
TGCGAACGAGGTTTACGATGAAGAAGAGGACGTCTATACAAAGAAGTGTA
AAACATGTGATCATCAAATTACTTACGAGAAGATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1380643..1387339 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 664-819:6542 |
| Aaloc | 544-660:5723 |
| Aaloc | 427-543:5397 |
| Aaloc | 373-426:5227 |
| Aaloc | 268-369:449 |
| Aaloc | 1-264:1 |
|
