XLOC_039005 (mRNA) -

Overview
NameXLOC_039005
Unique NameXLOC_039005
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000192_pilon:519782..521955+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039005 ID=XLOC_039005|Name=XLOC_039005|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2174bp|location=Sequence derived from alignment at sc0000192_pilon:519782..521955+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTTGGACATGAAATACGAAAATGTTGTCAAATCAATGTATCTTTA TTTGGAAAGAAAGCAAACAACCCTTTTAAAACAACAAGCAAATCTCGCTG ATCAGATGAATTCTCTTGTTGTCTTGCAAACTACTATGGGAAATCAACAG ACAATTCTAAACAATAAACACAAAGTCTTGGCTGAAAAACAAGCTTCGAC ATCCCAAGATTTTGTTAACCTACGAACTTCAAATGCTCAAAAGATTGGAG ATCTAACTCAAGAGTTGACCCTTCAAAGGGAACAACAAGATCTAAATTCA GAAGAAatcaattctttaaaaaaaagattggaggAAATTAACACCGCACG ACAATCTTTAAAAGAGCGCTTTTCCAGTCCTAGGAAAAAACGGGTTGATT CAGGTAAGgatgattttcaaaatgaagaaaaacaaatttctcattttttc cttttattaaAACAATTACTGTATCTTGgtcagaaaagaaaattatcaag TACttttttttCCGAACAAAAAtgggatacatttcaacaaggTAAATATA AAATTTAGATTGTTTGTCAGTTTGAACTTAAAGTGTTCACCTAAAACCTT TAGGGTCCTGCTGTTTGAAGAAAGTTCTTGATCACATTTCCAAAGAGTTG GGGATTGAAGAAAGGAAGACACTTCTCAAAAAACTTGGTATCGAAGCTGA TAATCCACGAAAAGAATTTTCGGAGCAATTGGAGGATATCACATGGTCGG AGATCAAGAAAGAACTTGAGGTACTAGAAAGAAACGACATTGTCAAGTAT ATTAAGAAGAATACTTTACTCACAAAAGGTACtttatttgttttaggcct attttttgtactttatttttCCTAATGGGCAGTAGTgtggtgggtcgact aaaattcgggcaaactttagaaaatgaaaagtaaatatttttaacgCAAG CAAAGTGAGCACAAAGATATTTGGGTATTTTTTCTCTAtttggccgaaaa ctgccaTGTCTAAagtgtaaaagagcaaaggggcgccgaaattagtaatt aGAGGCGTCTTTTAGCACTTTTTGTATTTTAGCGCCCCTTTGAAAAACCT CCGCTGCCCTACCACGCTACTGCTAATGGGTAAAGAAACCTTGAGGGAAA TAGCTCACACAACTAGATCTAAACTGGTTTACTAAATTACCAAATAACCC CGAGATTCGCATACCATTCCGattagagaaaataaaaattatcaaaatca cCAATATATTGGGATCAACTTTTGTGATCAACTTATACAATGAACTTTTT AGATCTCCAGAGAGCAGCATCTCATTTAAAAGAACACTATCTAAACGAAC TGATCCGGTGTCTCGTCGAACAACCGTTATCTCAAACGGATAGCGATATT GATTACGTCATGCGAGAGGATGTTTATATCGATCTCGTTGTGTTGCCATC CTCAACCGTTGACAAGGAATGGTCAAACTCTGATCGTGATGCTTTGGTTG AACAGCAAAAGCTTGTAAAATCAACTGTTGAAAAAGAtatcaaaactatt ttattACCTAGCGATGAAGTCGTTTTTATCCGTGGTGTTGCAGGAATTGG AAAATCAACGCTTCTTGACATGTTTACACTAAAATGGgccaaaaatgaaa tatctaatggaattgactttgttttcaaattcacTTGTAGAGAATTGAAT AATGTTTCGACCAATTTCAACAATCTAGAGCAGctcttcaaattgaaatt tccaGACGTGATGCAAGTCATCACATTTAAAAATCTGATGGAGATTTCGG AAAGAGTTTTAATTGTTGTAGATGGTATTGACGAGTTAAGAGATTTATAT GAGGTTAGAAACGACACAGTATCAAATGGGAACAGGATTAGTAATAAGGT TTTCGAACTACTTAATCCGAAAACAGGGTGGCTTTTACACCATAAATCAA TAGTTTGTGGACGTCCCAGAGCTACTGAATTCATCAAAAAACAACTTCCA CCAAGTTCAAAACGGAAGACCGTTGAGGTTTGCGGCTttgatgacaaaaa tattgaaaaatatattcaaaacttttttcgtgATAAGAAGGAAAAAGCAG TTTCCGTTCAAACAATAATCGAAAGCTCGTACGATCTGCGTATTATGGCA CGTGTACCGGTGTTTTTATACATT

Coding sequence (CDS) from alignment at sc0000192_pilon:519782..521955+

>XLOC_039005 ID=XLOC_039005|Name=XLOC_039005|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000192_pilon:519782..521955+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTTGGACATGAAATACGAAAATGTTGTCAAATCAATGTATCTTTA
TTTGGAAAGAAAGCAAACAACCCTTTTAAAACAACAAGCAAATCTCGCTG
ATCAGATGAATTCTCTTGTTGTCTTGCAAACTACTATGGGAAATCAACAG
ACAATTCTAAACAATAAACACAAAGTCTTGGCTGAAAAACAAGCTTCGAC
ATCCCAAGATTTTGTTAACCTACGAACTTCAAATGCTCAAAAGATTGGAG
ATCTAACTCAAGAGTTGACCCTTCAAAGGGAACAACAAGATCTAAATTCA
GAAGAAatcaattctttaaaaaaaagattggaggAAATTAACACCGCACG
ACAATCTTTAAAAGAGCGCTTTTCCAGTCCTAGGAAAAAACGGGTTGATT
CAGATGTCTTTGGACATGAAATACGAAAATGTTGTCAAATCAATGTATCT
TTATTTGGAAAGAAAGCAAACAACCCTTTTAAAACAACAAGCAAATCTCG
CTGATCAGATGAATTCTCTTGTTGTCTTGCAAACTACTATGGGAAATCAA
CAGACAATTCTAAACAATAAACACAAAGTCTTGGCTGAAAAACAAGCTTC
GACATCCCAAGATTTTGTTAACCTACGAACTTCAAATGCTCAAAAGATTG
GAGATCTAACTCAAGAGTTGACCCTTCAAAGGGAACAACAAGATCTAAAT
TCAGAAGAAatcaattctttaaaaaaaagattggaggAAATTAACACCGC
ACGACAATCTTTAAAAGAGCGCTTTTCCAGTCCTAGGAAAAAACGGGTTG
ATTCAGGGTCCTGCTGTTTGAAGAAAGTTCTTGATCACATTTCCAAAGAG
TTGGGGATTGAAGAAAGGAAGACACTTCTCAAAAAACTTGGTATCGAAGC
TGATAATCCACGAAAAGAATTTTCGGAGCAATTGGAGGATATCACATGGT
CGGAGATCAAGAAAGAACTTGAGGTACTAGAAAGAAACGACATTGTCAAG
TATATTAAGAAGAATACTTTACTCACAAAAGGGTCCTGCTGTTTGAAGAA
AGTTCTTGATCACATTTCCAAAGAGTTGGGGATTGAAGAAAGGAAGACAC
TTCTCAAAAAACTTGGTATCGAAGCTGATAATCCACGAAAAGAATTTTCG
GAGCAATTGGAGGATATCACATGGTCGGAGATCAAGAAAGAACTTGAGGT
ACTAGAAAGAAACGACATTGTCAAGTATATTAAGAAGAATACTTTACTCA
CAAAAGATCTCCAGAGAGCAGCATCTCATTTAAAAGAACACTATCTAAAC
GAACTGATCCGGTGTCTCGTCGAACAACCGTTATCTCAAACGGATAGCGA
TATTGATTACGTCATGCGAGAGGATGTTTATATCGATCTCGTTGTGTTGC
CATCCTCAACCGTTGACAAGGAATGGTCAAACTCTGATCGTGATGCTTTG
GTTGAACAGCAAAAGCTTGTAAAATCAACTGTTGAAAAAGAtatcaaaac
tattttattACCTAGCGATGAAGTCGTTTTTATCCGTGGTGTTGCAGGAA
TTGGAAAATCAACGCTTCTTGACATGTTTACACTAAAATGGgccaaaaat
gaaatatctaatggaattgactttgttttcaaattcacTTGTAGAGAATT
GAATAATGTTTCGACCAATTTCAACAATCTAGAGCAGctcttcaaattga
aatttccaGACGTGATGCAAGTCATCACATTTAAAAATCTGATGGAGATT
TCGGAAAGAGTTTTAATTGTTGTAGATGGTATTGACGAGTTAAGAGATTT
ATATGAGGTTAGAAACGACACAGTATCAAATGGGAACAGGATTAGTAATA
AGGTTTTCGAACTACTTAATCCGAAAACAGGGTGGCTTTTACACCATAAA
TCAATAGTTTGTGGACGTCCCAGAGCTACTGAATTCATCAAAAAACAACT
TCCACCAAGTTCAAAACGGAAGACCGTTGAGGTTTGCGGCTttgatgaca
aaaatattgaaaaatatattcaaaacttttttcgtgATAAGAAGGAAAAA
GCAGTTTCCGTTCAAACAATAATCGAAAGCTCGTACGATCTGCGTATTAT
GGCACGTGTACCGGTGTTTTTATACATTATCTCCAGAGAGCAGCATCTCA
TTTAAAAGAACACTATCTAAACGAACTGATCCGGTGTCTCGTCGAACAAC
CGTTATCTCAAACGGATAGCGATATTGATTACGTCATGCGAGAGGATGTT
TATATCGATCTCGTTGTGTTGCCATCCTCAACCGTTGACAAGGAATGGTC
AAACTCTGATCGTGATGCTTTGGTTGAACAGCAAAAGCTTGTAAAATCAA
CTGTTGAAAAAGAtatcaaaactattttattACCTAGCGATGAAGTCGTT
TTTATCCGTGGTGTTGCAGGAATTGGAAAATCAACGCTTCTTGACATGTT
TACACTAAAATGGgccaaaaatgaaatatctaatggaattgactttgttt
tcaaattcacTTGTAGAGAATTGAATAATGTTTCGACCAATTTCAACAAT
CTAGAGCAGctcttcaaattgaaatttccaGACGTGATGCAAGTCATCAC
ATTTAAAAATCTGATGGAGATTTCGGAAAGAGTTTTAATTGTTGTAGATG
GTATTGACGAGTTAAGAGATTTATATGAGGTTAGAAACGACACAGTATCA
AATGGGAACAGGATTAGTAATAAGGTTTTCGAACTACTTAATCCGAAAAC
AGGGTGGCTTTTACACCATAAATCAATAGTTTGTGGACGTCCCAGAGCTA
CTGAATTCATCAAAAAACAACTTCCACCAAGTTCAAAACGGAAGACCGTT
GAGGTTTGCGGCTttgatgacaaaaatattgaaaaatatattcaaaactt
ttttcgtgATAAGAAGGAAAAAGCAGTTTCCGTTCAAACAATAATCGAAA
GCTCGTACGATCTGCGTATTATGGCACGTGTACCGGTGTTTTTATACATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039005XLOC_039005-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000192_pilongenomesc0000192_pilon:519782..521955 +
Properties
Property NameValue
Aaloc631-1500:1305
Aaloc406-627:606
Aaloc1-402:1