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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:817300..821876- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041137 ID=XLOC_041137|Name=XLOC_041137|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4577bp|location=Sequence derived from alignment at sc0000135_pilon:817300..821876- (Clytia hemisphaerica_ch_hm2_pilon)
GATACATCGGAATCTGAGTTGATAGTCGTGCAACCATTATCACCACCGAA
CCTCCCTGAAAATGCTGATGTCAGCATTGGCGAACAAAACAATAACATTG
GTAGCAACGAGGGAGCAGGGGATCAGAAAAATATGGTACATAGTTTTTTA
TTCTGAAAGAATAATTTTGTAAGAATGGTTGTTTTCAACCCGGGGGGGGG
GGGTACTTTGGCAAAATGGGTGTCGGGTATGTGCGAGCCATAAGGGTCCC
TTTTTCACGTCCCTCAAAGTGGTACAAAAACAATTAAAAAGAAAATTGAG
TCTCTGTAAGGGTCCAAAAGTCACAAAATTCAAAATTTACTCTCTTAAAA
GGTCGTGATTTTTCATAAATTGGACAAAAATGGAGTGAGCATCGATAAAA
ATTTTGAAAAAAGTCTCAGAAACGCCAATTTCCCTCAGGGGGGGGGGGGT
CATGCAGTTATTATATAAACACTATGACAATTACTACCGTGGTGGGATAT
AAACCAAAATTTGGGAAAACAGTTACTCCACCAGTGGACTAACTGCAACA
TGGGTGGTGCCTAAGCCCAAAATTGTCGATTTTGGTAGGATATGGTGTAC
TAAGTGAGCACATTTTTCAATTTTTCACTTAAAATTTTAGGTTTTTAAAA
ATTCCAGAAATAAAAAAATTCAAAACATTTTTTTCAAAAGTCAAAAAAAA
AAAAAAATTTTTCTTCAATCAAGGCATTTAAGATATTTTAACAAACTTGG
AAAATAATTGAGATATTTAACTCTTGAACGGTCGTTAATAAGACGAACCC
AGTAAAATAGTATCAAAAATGAGGAATTCAGTGAAAAAATTGCCAAATTT
GGCATTTTTGGGGGTGGTATACACCAATTTTGAGGGTAAAATCAGTTAGT
ACACTATGGAATAACTGCAAGGGTGGTGGTGTCTGTAGTAAATGTCCAAA
ATTGCAGTTACTCCAGGTTACTCCACATAGTGTCAAGGAGTAACTGCAAG
ACCCCCCCCCCCTGTTTCCCTCACTAAGGGTCGATTTTCGATTTTTGGCT
CGGACATATTAAATAAAATAGTTTAAGAATGAAAAGCTGCCTATAAACAT
TGCTTAATCTAAGTCAATTTTAGAAGGAATCATAGTAGTAAAACCTGAGA
TGTTTCGTTTGTGTCATTAAAATAAGAACATGGTAAGAACAAATGGTAAG
AACAATGAAGATCAATGGGCTGGTAGTAGATAAACGAGATCAAGTTGGCC
TTGAGCTTTGGCACGTTTTTTATTTCATATTTTTTTCCTTATTTCTCACC
TTCGACTGCTGAAATTCTACCAGCTCTTCCAGTAGATGATTGTTCTTATA
AGTCATTCCTATAGTAATAATTTTCTAATTATTTTCTTTTCATAAGCTGG
AAGACTTCACAACGATAGCATCTCCTATGCCAATGACGATTGTGCCGTGT
TTTGTGTGTGGCGATCGATCTTCGGGACGTCATTACGGCGTCCTGACGTG
CGACGGCTGTCGTGGGTTTTTTAAACGAAGCGTTAGACGGGGAGTTGGAT
ACCATTGCCGTGATAAAGGGCGATGCGTCGTGAATCTGAGTCGACGAAAT
CAATGTCAGAGTTGCAGGTTTAAGAAATGTTTGAGTGTTGGTATGAGAAA
AGAGGGTAAGGCTTCATTTTTAACAGCACGTAATGGGTATATCGCGGTTG
TAGCATGAAGGTAGAGCATCCAGCTTAGGTGTGCAAGGTCGTGGGTTCAA
TCCCTGGCCGGGTCATACCAACGACGATGTACTTAGTGCAAGATGGTACC
TGATGCCTATCTCTGCTTGATGTTCAGTAATAATAGGAAAATCGAGGGCA
ATCCAGGGAGAAAAAGTGGCGCCCTCTCCTACCTTTCGGATAAGACAGCT
ATTGAAAGAGGAGCCTTCAGGTCGCCTCTGATTCATGATATTCATGACGT
AATGTTTTCTACGGAAAGACACCGGTTTTTACCAGTAGTGGCAAATTTTA
AACAACTTTTGTCTAGTTTAAATTTGCCACTACTGGCTTAAACCGGGTTA
TATTATTCGAAAATGTTATAGAATGGTTTCCATATAAAATGATATCCTTT
CAACCAATATCAATTTCAAGGTTGCAGATCACCTTTCAAAAGTTAAATCT
TTTTTTCAGCTGTTCAACACGAGCGTGCACCACGTAACAAAAAGGGTGGT
CAAACACCGGACCGCCCAAATGAATTTTCACCTTATCCGCCACAAATTGT
TTACCATCGAGTACCTGTATCAGGTAATATTTAATGATTCGACTTTGCTG
TTCGCCTTACACATTTTGTTTTTTTAAGAAACACACTTTTAAGAAACATG
AGGCTCAGAATGCCTAAAAACTAAGAAACATGCTGAGGCTGAGAATGAGA
AAATAACATTTTTTAATTCGGTTTTTTTAAGAACCTTCCAATCCAGCCTT
TCATAAGGCTGATTATGTCAAAAAGATTTAGAAACATGTAAGAAACATTT
AAGGCTGAAAAGGCCGATTTCTTAAGAAACATTGAGGCTGCTTGGTAAAA
CTATTTTCTTTAAAAAAAAAACGTGTATACATTGTTCTTTGAACTGTTGT
TATTGTTTTGTTTTTTTTAGTGTTGTTAACCATTTCATTGAAACAATTCC
CTCGCGTTGTTTGTTGCTTCCTTTTTTTGAACACTTTTTTATAGGGGGCG
AGTCTCAATGCCAAAACAAAGGCAAAAGCTTTGGTGCAGGCTGGAGACTG
GAGATCTCCACTACGAGCTTACCATATAATATAACATAATAGCGATTTTA
TGTATTTGCACTTTTGAGGACGGTAAAGCGATTTGGAATAGCCCGCAGTT
CTCACCTGCAAAATCGAGGACGGTAAAAGTGCTGATTTACCGTCGTCCTC
AGTTGATCAGGATCTACTCAAACTACTAGTAGAGCCTTACCGTCTCCACT
GCTGAAAAATACACATACATAAACTCGGTAATGAAGTTAAACACTTGTAG
TTAGCAAGTTCGATAATTGAAAATAATAATTTTTTATCTTCTCGTTTTGT
CATTTAGGCGATGTCGCTGAACTACCAGTCACGTGCTCTAATATACCACC
CGCAGCTCAAAGAGTACCGCCGACGCCTCTACCTACACAACGCCCTAAGC
CGCCTCAAGTCTTTGTGAACACACCCAAGGAGCTGTACGAAGTGTGTGCT
CGCCTGTTATACGAAGCTATCTCTTGGGCACGAAACATTCCGACTTTTTC
TCAATTACCGTTAGATGATCAGGCTTTACTATTGGAATACAGCTGGAGTG
AAATATTTCTACTTAACCTTGCGCAGCTCAATATTCCTCTTGGTATGGAA
ACAATGATCAAGCTGACTCAGCAATCTAAAGAATATCTGAACGATAAAAG
TGATATTAATAAAGACACTTTAAACGAATTGGTGCATATACAATCAGTTG
TTTTCAAATTGAAAACATTAAACATGTCATCTGCTGAATATTCTTGCGTC
AAAGCCATTGTACTCTTCAAACCAGGTGAATTTCTTTATAAATTGCTCAA
GTCAAGGGATCAACCTGCTGGATGTTTCTAGTGGGTGCCCTGAGTAGTCA
GTACCTTAAGGGAAGAAATTTTGGCGGGAGCCATGCGCCAAATTGAATCC
CGCCAAATTTTTTTCCCTTAAAGTACTTCTCAATATCCACATGGGGTGAC
ATTCTTTCAGATGGGGTTACAGGGGTGATGCCTTCTTGACTCTACATGCG
CCAATGAGAATCATCCATATATAAACAAATTTAAACGAAAAATCACGAAA
TGAGCCAAAATTTCTTTCAATCAAAAATAATTAGTTTTTGAATTAAGGTT
AAGGTTTTTAGCTTTTTACCAGTTTTCAAGATAACAATGATTTTACTCTT
CTGAGGACGAATTATGCTTCCAAATGAATAGAATATACAGTTGACTGTCG
CTAATTCGATATTTTATCATTCAATACGCCCTATTCGGTAATATCGAAAG
TCACCGTACCCTTCACAAGAATTTCTTATAGATAACGATGAAACTAAACT
TATTCGATGAAAATTAAATTCCCTTTTGAAAATCAAATTAGAAAGCGTCA
ACTTTATGACTATCTTCTTTTTTAGATCTTCGTCGAATAAAGTCTCGTCA
ACATATCGAAAACCTTCAAGAACAAGCACAATTAAGACTCTTAGATTCTG
TTATGGTAAAAGGACCTCGTGCAAGGTTCGGAAAAATCCTTCTCAAATTA
TCACTATTGGGTGAAGTTTCCCCGTCTTTCATTGAGAAATGTTTCTTCAA
AGGTGGACTCGAAAATATAAGTGACGAATTTTGCAGTAGCTCCACTGAAT
CTAATTCTAACCAATCAGATATGATATCAACACTCAAGAACCAATCAGAA
AAAACTCCTGTTGATAGAAACCAATCAGAGGCAATCACGCCAGAAAACAA
TAAATCAATCAGCCAATCAGAAGGCGAGAAAGTTAACGGTGACCAATCAA
AAGACTTGAATTTCTTTAACCATGAAATTAAACAAGAAGTTGAGGATATT
GTGCAAGTTGTTGCTTCTGAAACTTGA Coding sequence (CDS) from alignment at sc0000135_pilon:817300..821876- >XLOC_041137 ID=XLOC_041137|Name=XLOC_041137|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2856bp|location=Sequence derived from alignment at sc0000135_pilon:817300..821876- (Clytia hemisphaerica_ch_hm2_pilon)
GATACATCGGAATCTGAGTTGATAGTCGTGCAACCATTATCACCACCGAA
CCTCCCTGAAAATGCTGATGTCAGCATTGGCGAACAAAACAATAACATTG
GTAGCAACGAGGGAGCAGGGGATCAGAAAAATATGGATACATCGGAATCT
GAGTTGATAGTCGTGCAACCATTATCACCACCGAACCTCCCTGAAAATGC
TGATGTCAGCATTGGCGAACAAAACAATAACATTGGTAGCAACGAGGGAG
CAGGGGATCAGAAAAATATGCTGGAAGACTTCACAACGATAGCATCTCCT
ATGCCAATGACGATTGTGCCGTGTTTTGTGTGTGGCGATCGATCTTCGGG
ACGTCATTACGGCGTCCTGACGTGCGACGGCTGTCGTGGGTTTTTTAAAC
GAAGCGTTAGACGGGGAGTTGGATACCATTGCCGTGATAAAGGGCGATGC
GTCGTGAATCTGAGTCGACGAAATCAATGTCAGAGTTGCAGGTTTAAGAA
ATGTTTGAGTGTTGGTATGAGAAAAGAGGCTGGAAGACTTCACAACGATA
GCATCTCCTATGCCAATGACGATTGTGCCGTGTTTTGTGTGTGGCGATCG
ATCTTCGGGACGTCATTACGGCGTCCTGACGTGCGACGGCTGTCGTGGGT
TTTTTAAACGAAGCGTTAGACGGGGAGTTGGATACCATTGCCGTGATAAA
GGGCGATGCGTCGTGAATCTGAGTCGACGAAATCAATGTCAGAGTTGCAG
GTTTAAGAAATGTTTGAGTGTTGGTATGAGAAAAGAGGCTGTTCAACACG
AGCGTGCACCACGTAACAAAAAGGGTGGTCAAACACCGGACCGCCCAAAT
GAATTTTCACCTTATCCGCCACAAATTGTTTACCATCGAGTACCTGTATC
AGCTGTTCAACACGAGCGTGCACCACGTAACAAAAAGGGTGGTCAAACAC
CGGACCGCCCAAATGAATTTTCACCTTATCCGCCACAAATTGTTTACCAT
CGAGTACCTGTATCAGGCGATGTCGCTGAACTACCAGTCACGTGCTCTAA
TATACCACCCGCAGCTCAAAGAGTACCGCCGACGCCTCTACCTACACAAC
GCCCTAAGCCGCCTCAAGTCTTTGTGAACACACCCAAGGAGCTGTACGAA
GTGTGTGCTCGCCTGTTATACGAAGCTATCTCTTGGGCACGAAACATTCC
GACTTTTTCTCAATTACCGTTAGATGATCAGGCTTTACTATTGGAATACA
GCTGGAGTGAAATATTTCTACTTAACCTTGCGCAGCTCAATATTCCTCTT
GGTATGGAAACAATGATCAAGCTGACTCAGCAATCTAAAGAATATCTGAA
CGATAAAAGTGATATTAATAAAGACACTTTAAACGAATTGGTGCATATAC
AATCAGTTGTTTTCAAATTGAAAACATTAAACATGTCATCTGCTGAATAT
TCTTGCGTCAAAGCCATTGTACTCTTCAAACCAGGCGATGTCGCTGAACT
ACCAGTCACGTGCTCTAATATACCACCCGCAGCTCAAAGAGTACCGCCGA
CGCCTCTACCTACACAACGCCCTAAGCCGCCTCAAGTCTTTGTGAACACA
CCCAAGGAGCTGTACGAAGTGTGTGCTCGCCTGTTATACGAAGCTATCTC
TTGGGCACGAAACATTCCGACTTTTTCTCAATTACCGTTAGATGATCAGG
CTTTACTATTGGAATACAGCTGGAGTGAAATATTTCTACTTAACCTTGCG
CAGCTCAATATTCCTCTTGGTATGGAAACAATGATCAAGCTGACTCAGCA
ATCTAAAGAATATCTGAACGATAAAAGTGATATTAATAAAGACACTTTAA
ACGAATTGGTGCATATACAATCAGTTGTTTTCAAATTGAAAACATTAAAC
ATGTCATCTGCTGAATATTCTTGCGTCAAAGCCATTGTACTCTTCAAACC
AGATCTTCGTCGAATAAAGTCTCGTCAACATATCGAAAACCTTCAAGAAC
AAGCACAATTAAGACTCTTAGATTCTGTTATGGTAAAAGGACCTCGTGCA
AGGTTCGGAAAAATCCTTCTCAAATTATCACTATTGGGTGAAGTTTCCCC
GTCTTTCATTGAGAAATGTTTCTTCAAAGGTGGACTCGAAAATATAAGTG
ACGAATTTTGCAGTAGCTCCACTGAATCTAATTCTAACCAATCAGATATG
ATATCAACACTCAAGAACCAATCAGAAAAAACTCCTGTTGATAGAAACCA
ATCAGAGGCAATCACGCCAGAAAACAATAAATCAATCAGCCAATCAGAAG
GCGAGAAAGTTAACGGTGACCAATCAAAAGACTTGAATTTCTTTAACCAT
GAAATTAAACAAGAAGTTGAGGATATTGTGCAAGTTGTTGCTTCTGAAAC
TTGAATCTTCGTCGAATAAAGTCTCGTCAACATATCGAAAACCTTCAAGA
ACAAGCACAATTAAGACTCTTAGATTCTGTTATGGTAAAAGGACCTCGTG
CAAGGTTCGGAAAAATCCTTCTCAAATTATCACTATTGGGTGAAGTTTCC
CCGTCTTTCATTGAGAAATGTTTCTTCAAAGGTGGACTCGAAAATATAAG
TGACGAATTTTGCAGTAGCTCCACTGAATCTAATTCTAACCAATCAGATA
TGATATCAACACTCAAGAACCAATCAGAAAAAACTCCTGTTGATAGAAAC
CAATCAGAGGCAATCACGCCAGAAAACAATAAATCAATCAGCCAATCAGA
AGGCGAGAAAGTTAACGGTGACCAATCAAAAGACTTGAATTTCTTTAACC
ATGAAATTAAACAAGAAGTTGAGGATATTGTGCAAGTTGTTGCTTCTGAA
ACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:817300..821876 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 985-1434:451 |
| Aaloc | 517-981:1519 |
| Aaloc | 403-513:2417 |
| Aaloc | 142-399:3182 |
| Aaloc | 7-141:4578 |
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