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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000036_pilon:1285993..1288489- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033822 ID=XLOC_033822|Name=XLOC_033822|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2497bp|location=Sequence derived from alignment at sc0000036_pilon:1285993..1288489- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAATGATAATATCACTCAAAAATTATTGCTATTGCAGCCGAAGCT
GATCGACCCTACAAAATGCAATACAAGCACATCACTGTACCAGCAGATCA
TCAAGAACAACCAAGCAACGTCAGAAAGACAGTCGAGAATGTTCAACTTG
GGGAACACTCACCATACTGAAAATCCGATAGAAGCAGCAGAATTCATCCT
TGAGAGAGAATACGGAGACAGTTCACTGTTTCGTCAAGATGAGCACGCTT
GTGTTTTCATTCCACCCACGTTCGTTTCAAATCAATACACGAAAAAGTCG
GACGTCGCCATTCTCGATTATGAAGTTAAAAAAGACATTGAACGCCTGGC
AGAGAACTTGAAAGAACATTCGCCTGACCATTGGCTGACCAGAGAGATAC
AAGCATTGTTAGAAACGCAAAACGATGCCGAATGTATTGATAAAAGGACA
TTTGACCAATGGGCTTTGAATATTCAAGTGATGTATCTGGTCGTCAGAGA
GCTGAAAACTGATCACGTGGTTTTACCGCCGGCGACAACTACAGAGCTAG
TCGTTTTCGTCCAAGCCTGTACAGAAAAGCTTATCCAGAACACGCCCATC
GAAAAGTTTCTAAGAGAGAGCCATACGAAAAAGACCTTCCGAAAGTTAAT
AAAACGAAAAATTGACAACGCGCCTTGTGAAGATTCGAACCTTCGTTGGC
TTTTTGGATTGGAGTTGGTAAATCTTGGAGAAAGACTTGAACATTGGTTC
TACGATCAGCTTTTATCTTTAAAGGGCGATGGTATTCTTAAGGACACGGT
TGTACTCTCGTCCCTCGACTTCTTAACCAATATGGAAAGTAAAAATCACA
AAGAGACAGACTTTCTCATTTTTTCATGGCCGAAGAAACTCGTCATTTCG
GTTGAGATGAAAAGGTCACTTGCAGACGAGAAAGTGTTCAAACAGTTAGA
TTCGAACCATCAGATATTCGAAGAGAGTCTTGGTGACCTGTTGAGATCTG
GTTGGACATTCTTTCCAACAGTCTGTGTTGAAATAGATACTCTCTCAATC
AAAAGCGATCATTTTATCACAATGGATACCGAGATTAAACCATGGTTGAA
GAATATCTTCGATAGCTTCTCATCCTGCCAGACCGATATAAAACCAGCGC
CTTTGGATGAAGTCAAAGATCTCTTAAAGATCCTGATATTCGCAATCCAC
GTTTCAAAGAAGGATTTGGCTGCACCCATTACCACATCATCGTGGGTTAA
ATACACAAGCAACGCCATCGAAAACGTTTCGACTAGCCACAATATCCTGT
TCTACTCGAATCAACAGTTAGCTATAATGAACAACGACGATCCACGCTAC
AACAAAGTGGTGATCCGCGGCCCATTTGGTGTGGGCAAGAGCCTCTTGCT
CCAGCAGAAAGCCCTACAATTACATGAAAAAACAAAATATCGTGGCAAGT
TACTGTATCTGGTTTGTCGTCAAGGATACGTACCCCTGAAGCCCATGCTT
CTCCAGCGTTTAAAGGTCGAACTTCAAGACAAATATGGAATATTCGTAGG
AGTTCTTACACCCAAATTTTCGGTAAGTGCGACAATAAATTCGTCTCAAC
AAAACAATTTTAAACCAGACTAGAGTGTTCTAGAGTTTTGCAACCTTCGA
CTAATGGCTTTGACTTTGACTAAGGTCTTTTTATTCTTAGAGGTATTTTT
AAAAAGTGGCAATAAAATACCTTCTGATTCCCTCAGACTTGATAACTAAC
TTAATTATTGTTTTTATTTTTAAGGCAAAGGCTTGTCAGGATCGCCAGGC
TATCTTGGATAAAATCAAAGACCGCGACATCAAAGCAGTATTTATAGACG
AATGCGATTTGTTGTCAAGTCTCTCATCTTGGTTAGATAAAGTGACGGTA
ATCGTTGAATATCTGTGGATAGCCCCTTCTACAGATTCTTTGAAAGATTT
TCACAAACAAGATAATTTGACTGGCTTCCAGGTCCTAGATCTGTCGCAGA
ACTTTAGAAACAGTCGAGAAATCGTCAAATCAGCCAAATCAATCGCCGAA
TCAAGCGAATATCGATATAACCAAGGCATCATTATGCCACCTGAGAACTT
CCCTAGCGGCTGCACACCGATCTTTGCGGAAACCTTCGAAGAGGGTTTAA
GGGAAGCACGAAAACGAACGAGTGAAGGAATCCTGGTGATAGACGATAAA
CCAGACGAAGCAAATTCCAACATTCTAGACCAGTTGAACGAAACGTGGAA
AGGATATCACGAGTGGAGATACGATTTTAAAAACGGAGGAAATCCATACA
AGTTTCTCCAAGAAGGCAACGTACTGATTGTTTCTGAATTCACGTCTTTT
GGCTTCGAGTGGCCGACAGTGATTGTGGTTGAAACTATAAGAGCAGGAGG
CAGTATAGCGTTACACGATTGTAACTACGCATTGAGATGTACCACGAATC
TCATCATTGTTAAGAGAACTTACGATGGCGACGAGGACAGTGATTGA Coding sequence (CDS) from alignment at sc0000036_pilon:1285993..1288489- >XLOC_033822 ID=XLOC_033822|Name=XLOC_033822|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4590bp|location=Sequence derived from alignment at sc0000036_pilon:1285993..1288489- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAATGATAATATCACTCAAAAATTATTGCTATTGCAGCCGAAGCT
GATCGACCCTACAAAATGCAATACAAGCACATCACTGTACCAGCAGATCA
TCAAGAACAACCAAGCAACGTCAGAAAGACAGTCGAGAATGTTCAACTTG
GGGAACACTCACCATACTGAAAATCCGATAGAAGCAGCAGAATTCATCCT
TGAGAGAGAATACGGAGACAGTTCACTGTTTCGTCAAGATGAGCACGCTT
GTGTTTTCATTCCACCCACGTTCGTTTCAAATCAATACACGAAAAAGTCG
GACGTCGCCATTCTCGATTATGAAGTTAAAAAAGACATTGAACGCCTGGC
AGAGAACTTGAAAGAACATTCGCCTGACCATTGGCTGACCAGAGAGATAC
AAGCATTGTTAGAAACGCAAAACGATGCCGAATGTATTGATAAAAGGACA
TTTGACCAATGGGCTTTGAATATTCAAGTGATGTATCTGGTCGTCAGAGA
GCTGAAAACTGATCACGTGGTTTTACCGCCGGCGACAACTACAGAGCTAG
TCGTTTTCGTCCAAGCCTGTACAGAAAAGCTTATCCAGAACACGCCCATC
GAAAAGTTTCTAAGAGAGAGCCATACGAAAAAGACCTTCCGAAAGTTAAT
AAAACGAAAAATTGACAACGCGCCTTGTGAAGATTCGAACCTTCGTTGGC
TTTTTGGATTGGAGTTGGTAAATCTTGGAGAAAGACTTGAACATTGGTTC
TACGATCAGCTTTTATCTTTAAAGGGCGATGGTATTCTTAAGGACACGGT
TGTACTCTCGTCCCTCGACTTCTTAACCAATATGGAAAGTAAAAATCACA
AAGAGACAGACTTTCTCATTTTTTCATGGCCGAAGAAACTCGTCATTTCG
GTTGAGATGAAAAGGTCACTTGCAGACGAGAAAGTGTTCAAACAGTTAGA
TTCGAACCATCAGATATTCGAAGAGAGTCTTGGTGACCTGTTGAGATCTG
GTTGGACATTCTTTCCAACAGTCTGTGTTGAAATAGATACTCTCTCAATC
AAAAGCGATCATTTTATCACAATGGATACCGAGATTAAACCATGGTTGAA
GAATATCTTCGATAGCTTCTCATCCTGCCAGACCGATATAAAACCAGCGC
CTTTGGATGAAGTCAAAGATCTCTTAAAGATCCTGATATTCGCAATCCAC
GTTTCAAAGAAGGATTTGGCTGCACCCATTACCACATCATCGTGGGTTAA
ATACACAAGCAACGCCATCGAAAACGTTTCGACTAGCCACAATATCCTGT
TCTACTCGAATCAACAGTTAGCTATAATGAACAACGACGATCCACGCTAC
AACAAAGTGGTGATCCGCGGCCCATTTGGTGTGGGCAAGAGCCTCTTGCT
CCAGCAGAAAGCCCTACAATTACATGAAAAAACAAAATATCGTGGCAAGT
TACTGTATCTGGTTTGTCGTCAAGGATACGTACCCCTGAAGCCCATGCTT
CTCCAGCGTTTAAAGGTCGAACTTCAAGACAAATATGGAATATTCGTAGG
AGTTCTTACACCCAAATTTTCGATGATGAATGATAATATCACTCAAAAAT
TATTGCTATTGCAGCCGAAGCTGATCGACCCTACAAAATGCAATACAAGC
ACATCACTGTACCAGCAGATCATCAAGAACAACCAAGCAACGTCAGAAAG
ACAGTCGAGAATGTTCAACTTGGGGAACACTCACCATACTGAAAATCCGA
TAGAAGCAGCAGAATTCATCCTTGAGAGAGAATACGGAGACAGTTCACTG
TTTCGTCAAGATGAGCACGCTTGTGTTTTCATTCCACCCACGTTCGTTTC
AAATCAATACACGAAAAAGTCGGACGTCGCCATTCTCGATTATGAAGTTA
AAAAAGACATTGAACGCCTGGCAGAGAACTTGAAAGAACATTCGCCTGAC
CATTGGCTGACCAGAGAGATACAAGCATTGTTAGAAACGCAAAACGATGC
CGAATGTATTGATAAAAGGACATTTGACCAATGGGCTTTGAATATTCAAG
TGATGTATCTGGTCGTCAGAGAGCTGAAAACTGATCACGTGGTTTTACCG
CCGGCGACAACTACAGAGCTAGTCGTTTTCGTCCAAGCCTGTACAGAAAA
GCTTATCCAGAACACGCCCATCGAAAAGTTTCTAAGAGAGAGCCATACGA
AAAAGACCTTCCGAAAGTTAATAAAACGAAAAATTGACAACGCGCCTTGT
GAAGATTCGAACCTTCGTTGGCTTTTTGGATTGGAGTTGGTAAATCTTGG
AGAAAGACTTGAACATTGGTTCTACGATCAGCTTTTATCTTTAAAGGGCG
ATGGTATTCTTAAGGACACGGTTGTACTCTCGTCCCTCGACTTCTTAACC
AATATGGAAAGTAAAAATCACAAAGAGACAGACTTTCTCATTTTTTCATG
GCCGAAGAAACTCGTCATTTCGGTTGAGATGAAAAGGTCACTTGCAGACG
AGAAAGTGTTCAAACAGTTAGATTCGAACCATCAGATATTCGAAGAGAGT
CTTGGTGACCTGTTGAGATCTGGTTGGACATTCTTTCCAACAGTCTGTGT
TGAAATAGATACTCTCTCAATCAAAAGCGATCATTTTATCACAATGGATA
CCGAGATTAAACCATGGTTGAAGAATATCTTCGATAGCTTCTCATCCTGC
CAGACCGATATAAAACCAGCGCCTTTGGATGAAGTCAAAGATCTCTTAAA
GATCCTGATATTCGCAATCCACGTTTCAAAGAAGGATTTGGCTGCACCCA
TTACCACATCATCGTGGGTTAAATACACAAGCAACGCCATCGAAAACGTT
TCGACTAGCCACAATATCCTGTTCTACTCGAATCAACAGTTAGCTATAAT
GAACAACGACGATCCACGCTACAACAAAGTGGTGATCCGCGGCCCATTTG
GTGTGGGCAAGAGCCTCTTGCTCCAGCAGAAAGCCCTACAATTACATGAA
AAAACAAAATATCGTGGCAAGTTACTGTATCTGGTTTGTCGTCAAGGATA
CGTACCCCTGAAGCCCATGCTTCTCCAGCGTTTAAAGGTCGAACTTCAAG
ACAAATATGGAATATTCGTAGGAGTTCTTACACCCAAATTTTCGGCAAAG
GCTTGTCAGGATCGCCAGGCTATCTTGGATAAAATCAAAGACCGCGACAT
CAAAGCAGTATTTATAGACGAATGCGATTTGTTGTCAAGTCTCTCATCTT
GGTTAGATAAAGTGACGGTAATCGTTGAATATCTGTGGATAGCCCCTTCT
ACAGATTCTTTGAAAGATTTTCACAAACAAGATAATTTGACTGGCTTCCA
GGTCCTAGATCTGTCGCAGAACTTTAGAAACAGTCGAGAAATCGTCAAAT
CAGCCAAATCAATCGCCGAATCAAGCGAATATCGATATAACCAAGGCATC
ATTATGCCACCTGAGAACTTCCCTAGCGGCTGCACACCGATCTTTGCGGA
AACCTTCGAAGAGGGTTTAAGGGAAGCACGAAAACGAACGAGTGAAGGAA
TCCTGGTGATAGACGATAAACCAGACGAAGCAAATTCCAACATTCTAGAC
CAGTTGAACGAAACGTGGAAAGGATATCACGAGTGGAGATACGATTTTAA
AAACGGAGGAAATCCATACAAGTTTCTCCAAGAAGGCAACGTACTGATTG
TTTCTGAATTCACGTCTTTTGGCTTCGAGTGGCCGACAGTGATTGTGGTT
GAAACTATAAGAGCAGGAGGCAGTATAGCGTTACACGATTGTAACTACGC
ATTGAGATGTACCACGAATCTCATCATTGTTAAGAGAACTTACGATGGCG
ACGAGGACAGTGATTGAGCAAAGGCTTGTCAGGATCGCCAGGCTATCTTG
GATAAAATCAAAGACCGCGACATCAAAGCAGTATTTATAGACGAATGCGA
TTTGTTGTCAAGTCTCTCATCTTGGTTAGATAAAGTGACGGTAATCGTTG
AATATCTGTGGATAGCCCCTTCTACAGATTCTTTGAAAGATTTTCACAAA
CAAGATAATTTGACTGGCTTCCAGGTCCTAGATCTGTCGCAGAACTTTAG
AAACAGTCGAGAAATCGTCAAATCAGCCAAATCAATCGCCGAATCAAGCG
AATATCGATATAACCAAGGCATCATTATGCCACCTGAGAACTTCCCTAGC
GGCTGCACACCGATCTTTGCGGAAACCTTCGAAGAGGGTTTAAGGGAAGC
ACGAAAACGAACGAGTGAAGGAATCCTGGTGATAGACGATAAACCAGACG
AAGCAAATTCCAACATTCTAGACCAGTTGAACGAAACGTGGAAAGGATAT
CACGAGTGGAGATACGATTTTAAAAACGGAGGAAATCCATACAAGTTTCT
CCAAGAAGGCAACGTACTGATTGTTTCTGAATTCACGTCTTTTGGCTTCG
AGTGGCCGACAGTGATTGTGGTTGAAACTATAAGAGCAGGAGGCAGTATA
GCGTTACACGATTGTAACTACGCATTGAGATGTACCACGAATCTCATCAT
TGTTAAGAGAACTTACGATGGCGACGAGGACAGTGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000036_pilon | genome | sc0000036_pilon:1285993..1288489 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1573-2295:724 |
| Aaloc | 1-1572:2498 |
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