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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:258538..260806- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035242 ID=XLOC_035242|Name=XLOC_035242|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2269bp|location=Sequence derived from alignment at sc0000252_pilon:258538..260806- (Clytia hemisphaerica_ch_hm2_pilon)
GGAGAAATAAACATAAAAATGGGGATATCTGGATTAACATCTTACATAAA
CAACCTACAGCAAACAATGTTTAAAGAAAGAATCAAGCTGAATAGTTCTT
GTTTGGTGATTGATGGATTTGCTCTCTTCTACGCATTGATGAAAACTGCA
AGGCGACGTGAATTTGGTGGTGATTATGATTTGCTTCGAGAACATCTCAA
TATTTTCTTTTCTAAACTGAGCAAAATGGACATTCAAGTATATGTTGTGT
TGGATGGAGGAAACAATATTGATTTGAAGAAAGCAACTATTGAAAAGCGA
AAGGTTCAAATGATTGAGAAAGTAACAGAATTCAATCGTTTAGGTCTTGG
ATACCGACAGATTGGTGATTTGCCAATTCCACTTCTCTCTATGTCCTTGT
TTCGTGAAGTAATGGAAATTCATGAAAATGTCAAGTATATTGTCTGTGAC
CAGTGAGAATTTTTCAATGTTTTTAACTTCTTTGCCTAGGTTTTTGTAAT
TACTTTGTAACCATCTTTCGGTTTTAAACTTTGCTATCTGAAACATCTAA
TAAAATTCTATACCCCTCAATACTCTTTGGCACTCATTTAACGTTTATAA
AAAAGATAAATATGATAACGTGATAGTGATAATATTTGTTTTTTTATGTT
TAGGGAAGCAGATTTGTTGGTGGCATCTTTGGCAAACCAATTGGATGGAT
ATGTGGTGACCAATGATAGTGACTTCTTTCTTTTGGACCTCAAGAAAGGT
CTTATTACCATCACCTCACTATGCGATTCCATCAAACAAAGCCAGCCTTA
CTGCACGATCTACAAGCAACAAAATCTTTCACAATACCTTGGAATCTCTC
CTGATCTTTTACCAATAATAGCTTTGGTGTTGGGTAATGATTACAGTGTG
GATTGCTACAGATTACAATTGCTGTCTCTGATGGGTATCCAACCAAGAGA
TAAAATTGATGTCAAAATAGAACATATTATGAAATATCTCAAGGGTGCAG
TATCTGTTGATCGACTTCTTCAAACTCTATGTTGTGGCAATGAGGAAATG
CAATCCCAGCTCTCTAAAGAACTAGAAGAGTACAACGTTCATCAGTTTGA
TGGTCTTTCTCAAGAATACATTGGCTATTTCGAAACGCAACAAAAAGAAA
CAGCTGCTCGGAATTTTTTCGATAGCAAAAACAAACTGAAAAATTTTATT
GATCAGTTAGTTCGAGCTGGTCTAATCGACGCATGTGTATTAGACTTGTT
GAACTACAAAACTCACTTTGTTAATGTGCAGTGTGAGCTTATTGCTAAAC
GTTGTACGTCGGTTTGTTCAAGTGTATTGAGGAGATACCTTTATGGAATG
TTGCTCAAGCAGGATGAAATTGTTGTTGAATATACAAGAAGTGGTCAGCA
ATATCGTCCAAAGATGGTTCGACCTTCAAATGATTTGCCTTCTCTCGACG
AGTTGTGGAGCAGATCTGAAGAAGAGAGACAATCCTTTTTTTTAGACCTT
CTAGATATCCCATTGGAAGGACGCGGAGCCATCATTTCACCAGCTCATCA
ATCTTCATTGTTTATCATCACATTACAGTATTTCACACAGGTTCACTCAA
CTTCTGAAGATCAAACCAATGCATTCCTTGAGATGCACTTGATATTGAGA
AATGGTAACAGATGTTTTGATGTACCACACCTTGATCAAGCTATGTTACA
TGTTTACAGTTCTTTTCATACAGTGTTTTATTACATCAACTTGATCAATA
CCCTGCTTGGTGAACCTTTCGTTACCCCGAAGGCCTCACAGTTGATGAGT
GGTAGTGTGTTCCAAAGTCTTTGCCAACGAGGTGAGTTTTTCAGATAAAA
TACAATACTTCATCCATGTTTTGTCATTCTTTAGTTCATGTCCAGTCTTA
TTCATTCAATCGAATCGTTTATTTTCACCTTTCATACTAGGCAACAAAGA
CTTTAAAGCTGACTATGCAAAAGAAGATCTTACTGACTTGGAGACATATC
AAAATTTCATTTTACCAAATATGATGGATAAAGTGCAACCTAGGTCATCT
TCCAAGAAGAATAACCAACACCATCATCATCACCATAGACATCATCAAGG
ATTGAAGAACAGCCAGTTATCAAACGATGTCTTGCCAAGGAAACCTGCTT
CTCAATCCGGTAGAAAGAAGTCAACTTTCCCATCCACTAACAAGAAACCT
TCTGCACAAGCCAGCAATAAGAAGCCATCTAACAGATTTCAACTCTTGTC
CCTTTCAGATGATGAGTGA Coding sequence (CDS) from alignment at sc0000252_pilon:258538..260806- >XLOC_035242 ID=XLOC_035242|Name=XLOC_035242|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3918bp|location=Sequence derived from alignment at sc0000252_pilon:258538..260806- (Clytia hemisphaerica_ch_hm2_pilon)
GGAGAAATAAACATAAAAATGGGGATATCTGGATTAACATCTTACATAAA
CAACCTACAGCAAACAATGTTTAAAGAAAGAATCAAGCTGAATAGTTCTT
GTTTGGTGATTGATGGATTTGCTCTCTTCTACGCATTGATGAAAACTGCA
AGGCGACGTGAATTTGGTGGTGATTATGATTTGCTTCGAGAACATCTCAA
TATTTTCTTTTCTAAACTGAGCAAAATGGACATTCAAGTATATGTTGTGT
TGGATGGAGGAAACAATATTGATTTGAAGAAAGCAACTATTGAAAAGCGA
AAGGTTCAAATGATTGAGAAAGTAACAGAATTCAATCGTTTAGGTCTTGG
ATACCGACAGATTGGTGATTTGCCAATTCCACTTCTCTCTATGTCCTTGT
TTCGTGAAGTAATGGAAATTCATGAAAATGTCAAGTATATTGTCTGTGAC
CAGGAGAAATAAACATAAAAATGGGGATATCTGGATTAACATCTTACATA
AACAACCTACAGCAAACAATGTTTAAAGAAAGAATCAAGCTGAATAGTTC
TTGTTTGGTGATTGATGGATTTGCTCTCTTCTACGCATTGATGAAAACTG
CAAGGCGACGTGAATTTGGTGGTGATTATGATTTGCTTCGAGAACATCTC
AATATTTTCTTTTCTAAACTGAGCAAAATGGACATTCAAGTATATGTTGT
GTTGGATGGAGGAAACAATATTGATTTGAAGAAAGCAACTATTGAAAAGC
GAAAGGTTCAAATGATTGAGAAAGTAACAGAATTCAATCGTTTAGGTCTT
GGATACCGACAGATTGGTGATTTGCCAATTCCACTTCTCTCTATGTCCTT
GTTTCGTGAAGTAATGGAAATTCATGAAAATGTCAAGTATATTGTCTGTG
ACCAGGAAGCAGATTTGTTGGTGGCATCTTTGGCAAACCAATTGGATGGA
TATGTGGTGACCAATGATAGTGACTTCTTTCTTTTGGACCTCAAGAAAGG
TCTTATTACCATCACCTCACTATGCGATTCCATCAAACAAAGCCAGCCTT
ACTGCACGATCTACAAGCAACAAAATCTTTCACAATACCTTGGAATCTCT
CCTGATCTTTTACCAATAATAGCTTTGGTGTTGGGTAATGATTACAGTGT
GGATTGCTACAGATTACAATTGCTGTCTCTGATGGGTATCCAACCAAGAG
ATAAAATTGATGTCAAAATAGAACATATTATGAAATATCTCAAGGGTGCA
GTATCTGTTGATCGACTTCTTCAAACTCTATGTTGTGGCAATGAGGAAAT
GCAATCCCAGCTCTCTAAAGAACTAGAAGAGTACAACGTTCATCAGTTTG
ATGGTCTTTCTCAAGAATACATTGGCTATTTCGAAACGCAACAAAAAGAA
ACAGCTGCTCGGAATTTTTTCGATAGCAAAAACAAACTGAAAAATTTTAT
TGATCAGTTAGTTCGAGCTGGTCTAATCGACGCATGTGTATTAGACTTGT
TGAACTACAAAACTCACTTTGTTAATGTGCAGTGTGAGCTTATTGCTAAA
CGTTGTACGTCGGTTTGTTCAAGTGTATTGAGGAGATACCTTTATGGAAT
GTTGCTCAAGCAGGATGAAATTGTTGTTGAATATACAAGAAGTGGTCAGC
AATATCGTCCAAAGATGGTTCGACCTTCAAATGATTTGCCTTCTCTCGAC
GAGTTGTGGAGCAGATCTGAAGAAGAGAGACAATCCTTTTTTTTAGACCT
TCTAGATATCCCATTGGAAGGACGCGGAGCCATCATTTCACCAGCTCATC
AATCTTCATTGTTTATCATCACATTACAGTATTTCACACAGGTTCACTCA
ACTTCTGAAGATCAAACCAATGCATTCCTTGAGATGCACTTGATATTGAG
AAATGGTAACAGATGTTTTGATGTACCACACCTTGATCAAGCTATGTTAC
ATGTTTACAGTTCTTTTCATACAGTGTTTTATTACATCAACTTGATCAAT
ACCCTGCTTGGTGAACCTTTCGTTACCCCGAAGGCCTCACAGTTGATGAG
TGGTAGTGTGTTCCAAAGTCTTTGCCAACGAGGGAAGCAGATTTGTTGGT
GGCATCTTTGGCAAACCAATTGGATGGATATGTGGTGACCAATGATAGTG
ACTTCTTTCTTTTGGACCTCAAGAAAGGTCTTATTACCATCACCTCACTA
TGCGATTCCATCAAACAAAGCCAGCCTTACTGCACGATCTACAAGCAACA
AAATCTTTCACAATACCTTGGAATCTCTCCTGATCTTTTACCAATAATAG
CTTTGGTGTTGGGTAATGATTACAGTGTGGATTGCTACAGATTACAATTG
CTGTCTCTGATGGGTATCCAACCAAGAGATAAAATTGATGTCAAAATAGA
ACATATTATGAAATATCTCAAGGGTGCAGTATCTGTTGATCGACTTCTTC
AAACTCTATGTTGTGGCAATGAGGAAATGCAATCCCAGCTCTCTAAAGAA
CTAGAAGAGTACAACGTTCATCAGTTTGATGGTCTTTCTCAAGAATACAT
TGGCTATTTCGAAACGCAACAAAAAGAAACAGCTGCTCGGAATTTTTTCG
ATAGCAAAAACAAACTGAAAAATTTTATTGATCAGTTAGTTCGAGCTGGT
CTAATCGACGCATGTGTATTAGACTTGTTGAACTACAAAACTCACTTTGT
TAATGTGCAGTGTGAGCTTATTGCTAAACGTTGTACGTCGGTTTGTTCAA
GTGTATTGAGGAGATACCTTTATGGAATGTTGCTCAAGCAGGATGAAATT
GTTGTTGAATATACAAGAAGTGGTCAGCAATATCGTCCAAAGATGGTTCG
ACCTTCAAATGATTTGCCTTCTCTCGACGAGTTGTGGAGCAGATCTGAAG
AAGAGAGACAATCCTTTTTTTTAGACCTTCTAGATATCCCATTGGAAGGA
CGCGGAGCCATCATTTCACCAGCTCATCAATCTTCATTGTTTATCATCAC
ATTACAGTATTTCACACAGGTTCACTCAACTTCTGAAGATCAAACCAATG
CATTCCTTGAGATGCACTTGATATTGAGAAATGGTAACAGATGTTTTGAT
GTACCACACCTTGATCAAGCTATGTTACATGTTTACAGTTCTTTTCATAC
AGTGTTTTATTACATCAACTTGATCAATACCCTGCTTGGTGAACCTTTCG
TTACCCCGAAGGCCTCACAGTTGATGAGTGGTAGTGTGTTCCAAAGTCTT
TGCCAACGAGGCAACAAAGACTTTAAAGCTGACTATGCAAAAGAAGATCT
TACTGACTTGGAGACATATCAAAATTTCATTTTACCAAATATGATGGATA
AAGTGCAACCTAGGTCATCTTCCAAGAAGAATAACCAACACCATCATCAT
CACCATAGACATCATCAAGGATTGAAGAACAGCCAGTTATCAAACGATGT
CTTGCCAAGGAAACCTGCTTCTCAATCCGGTAGAAAGAAGTCAACTTTCC
CATCCACTAACAAGAAACCTTCTGCACAAGCCAGCAATAAGAAGCCATCT
AACAGATTTCAACTCTTGTCCCTTTCAGATGATGAGTGAGCAACAAAGAC
TTTAAAGCTGACTATGCAAAAGAAGATCTTACTGACTTGGAGACATATCA
AAATTTCATTTTACCAAATATGATGGATAAAGTGCAACCTAGGTCATCTT
CCAAGAAGAATAACCAACACCATCATCATCACCATAGACATCATCAAGGA
TTGAAGAACAGCCAGTTATCAAACGATGTCTTGCCAAGGAAACCTGCTTC
TCAATCCGGTAGAAAGAAGTCAACTTTCCCATCCACTAACAAGAAACCTT
CTGCACAAGCCAGCAATAAGAAGCCATCTAACAGATTTCAACTCTTGTCC
CTTTCAGATGATGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252_pilon | genome | sc0000252_pilon:258538..260806 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1774-1965:193 |
| Aaloc | 1633-1767:328 |
| Aaloc | 454-1629:1616 |
| Aaloc | 1-450:2270 |
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