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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:515830..518873+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035287 ID=XLOC_035287|Name=XLOC_035287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3044bp|location=Sequence derived from alignment at sc0000042_pilon:515830..518873+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTGAGCCTCCACCACCATACGAagtctttgaaaatgaaaaagcagA
AGAAGATGACCATTCAAATCGCCAAAGCAGCCAGCCAACACCtttcattt
tgttaaaaaataaagactTTTTTGTTCGTTCGACATCCATTTTCATCGTG
GTTAATACAGTAAGTTCTCGATTTCAATCGACAAAAGACATACATTTTTT
GCTGACATGGACTTATTCTTTCATAGTTCTAAAGCTTTTGTAACCGTTTT
AATTCAAACTAAAAGTTTGATGGTTTAGTTTCAATTCTTCTCCCTTTAAT
GTCTTATGACATCTCCTTTTCAACCAAAATGGCAAGGTTGGATTCACATT
AGTGATTTAAACCATCCCGTGAGGGAGGCGGGGGAGTCAGGCAAATTGAA
CGACGGCtttgtgcggcggttaagggtatgtttcaAAATAGcagtaataa
aataaaaacgtaAAAGAACCATAGATAACTGGAAAGAAAGAGCAAGCTGT
AaattagaggtgaaaaataaGCAATCAATAACTAAAGTAGTGCAGAGCAA
AAGTGTCTGGACTGTTTCTGAGTCTTTATCTAGAATAGAGAGCTATAGAT
CAGGTTCATTGACAGCCTAAATAACCAGAGTTGGCATTTTGTCCAAAGAC
CCATTCTCTGAACTGAATTCCAAAATAAGCCTAATTTAGGTGGTCACtat
gctaaaatgtcaaaaaagtttttagtacatgtgtactaaaattacttttc
caaaaattaggtggggtatgtcaaaaatcatCTAAAAAACTTTTAGTACT
CATACGTGTCTTGGATTTTAGTAACGACCCCTTCTGGTAAGGGTGaactt
ttgataaatataaattgaataaatctgcgctgtaagggtgcgattctaaa
agctaATTtctttcgccgcacataccgtcagttggtaaaccaaCTGCCCC
CTAACCGGTTAACCCTTTCTCTTCTGTTTTCAGACCTTTTTGACGATAAA
TTGGGTAATGATTGTAATTTTGCGATGGAAGCTTGGAGATTCTGATGGAA
GTTTATCAGCGTTCAGCAGTGAGTCGTCCATGTACATGGCTGGAAATCTG
ATTTTGTGGATTTCCAACATTCTCTTCATCTTGGCTAACGTGACAGAAAT
CTCCAACAGATTGAAGGGTGGAGATATCAACATTCACAAAATCGTGAGTA
AACCTACACTACCCAGGTTTCTCAAACTTCACATCAAGGAATTTAAATAA
AGAATTTGCACCTTAAAGCTGGCTATCGGTCTGTGtttttatttgctttg
ttttcaaaaaatttgaaaagcttAAGTGCCTGGTGatatttttaaggatt
ttaatgACCAATCATTCAAATTCTTTGTTCGAATCAATAATCAATAATCT
TAACCTCAGTGAGAAAACGAGCTTGTGAGCATTGAGGAACTTCCGATTTT
TCCGATACATTGCTTacgatttgaaaatatttggatttaaACAATGCTAC
AATCAGCACAATAATATGTTGGCGGTAAGCCTTGAAATACCCCTTCGGAA
CTTTTATTTCACTCCCCCAgacccctaaaatcaaattcaGCAAATCCAAC
CATTGAAGTTAGGTAACtgggaatttctcaaaaacgcATGAAAATCACTG
TTTAATTAATGTCAAATAttttggcactgattgtagtaaCGTAAAATCTA
AAAGTAatctattttttaattttagtttttccCTACTATTCTTTGATTTT
AGATGATTGGAATATGTGTTATTTGCAGCTTTCTAGTCTTAGTTGGATGT
CTTTGGGGAATAGCTTCCATGACTCGACCGTTCTTCCAATTTCGTTCCGA
TTCTGAAATGGACGAGTACAGAGGATTGTGGACTTGCATGGTATATTACA
TTTTTCTCATTTCAAAACACACCCGGTATAGTATATTATGTTTCTTGTTC
ACCATTTGGTCTTTCTAAATCGATTTGCATTCTCAAAATGAGTATACGGT
GAGTCCTCTTGTACGCATAAGGTCCGATGTACGTGCCTaaaaaaaTATCG
TCCCaaaaaaaGGGCGAGAAGGGTATCTCTCAACTTACTACTAGTGGTAC
AGCTTCCTTCTTGTCATGTGGGTTCATTTGACAAGAAACCACGGCTGGTT
ATGCTGGTacatacccggggggcactaggTTTGCgggatgacgggtatgt
gccggccgACTTTTGGCGGTCGGGCCCTTATGGGGACCGAAACGGACCCT
CGGAGGGACTTAGATGGATTAAAAAACCCGAATTGTGAATTTTGTGACCC
TTATTGGAActattttatagaaatttaGcccccccccAATCTAGGCTTTT
CAGGGTACGATATTGAATTTGAGCTGGTTCGTGCAACCCTTAGGGACCCT
CCCCGGGGTACATACTAACACCCATGTCTCAGTGGCCCGGTGAAATCTTA
AAATACACCAGGGAGGGAGTGGCTATGAAAAAAGATTcactttcaacatt
tttatttaaagcGTTTGGTTTTTATAGAATTCACTTACTGATGTATATTC
TTCATTGTGCTCTAATTGATGCAATTTTTCGAGAGATAACGCTCTGTACT
GTGTACAGACATGCACGATAAAATTCTTATGTATAGTTTGTTTCTACAAC
TTAATTTCAGAGAAAGTTAAGCTGTAGTGTTCATGCGTACAGGTTACTGA
AAAAAGATTTAGTTAAGTGCAGGTTATATATGTTTTGCTATTTCAAGATT
TCCGGTGTTATGTATGATTTAAACCGATCCTCTGAAGCGAATATTTTAAA
TACAATATTTCCTCTCAAACtagtaaaaaacttttgttttctttctgaaC
AGATTATTGGTCTTGTGACAAGTGTTTTGTCAGCCATGCAAGCTTTCCTT
CATTATCGTTTGGATGATAACGAGATGATTGGATTGGTGGGAGTGTTCCC
CTGTTTTGTAGTGTTTGTTCCCTTATGGGAACGGTGTAAAGTcgactttg
aaaaaaagaagatgagAAATGAAGAAAGAATTAACGATTTGTAA Coding sequence (CDS) from alignment at sc0000042_pilon:515830..518873+ >XLOC_035287 ID=XLOC_035287|Name=XLOC_035287|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1398bp|location=Sequence derived from alignment at sc0000042_pilon:515830..518873+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTGAGCCTCCACCACCATACGAagtctttgaaaatgaaaaagcagA
AGAAGATGACCATTCAAATCGCCAAAGCAGCCAGCCAACACCtttcattt
tgttaaaaaataaagactTTTTTGTTCGTTCGACATCCATTTTCATCGTG
GTTAATACAATGATTGAGCCTCCACCACCATACGAagtctttgaaaatga
aaaagcagAAGAAGATGACCATTCAAATCGCCAAAGCAGCCAGCCAACAC
CtttcattttgttaaaaaataaagactTTTTTGTTCGTTCGACATCCATT
TTCATCGTGGTTAATACAACCTTTTTGACGATAAATTGGGTAATGATTGT
AATTTTGCGATGGAAGCTTGGAGATTCTGATGGAAGTTTATCAGCGTTCA
GCAGTGAGTCGTCCATGTACATGGCTGGAAATCTGATTTTGTGGATTTCC
AACATTCTCTTCATCTTGGCTAACGTGACAGAAATCTCCAACAGATTGAA
GGGTGGAGATATCAACATTCACAAAATCACCTTTTTGACGATAAATTGGG
TAATGATTGTAATTTTGCGATGGAAGCTTGGAGATTCTGATGGAAGTTTA
TCAGCGTTCAGCAGTGAGTCGTCCATGTACATGGCTGGAAATCTGATTTT
GTGGATTTCCAACATTCTCTTCATCTTGGCTAACGTGACAGAAATCTCCA
ACAGATTGAAGGGTGGAGATATCAACATTCACAAAATCATGATTGGAATA
TGTGTTATTTGCAGCTTTCTAGTCTTAGTTGGATGTCTTTGGGGAATAGC
TTCCATGACTCGACCGTTCTTCCAATTTCGTTCCGATTCTGAAATGGACG
AGTACAGAGGATTGTGGACTTGCATGATGATTGGAATATGTGTTATTTGC
AGCTTTCTAGTCTTAGTTGGATGTCTTTGGGGAATAGCTTCCATGACTCG
ACCGTTCTTCCAATTTCGTTCCGATTCTGAAATGGACGAGTACAGAGGAT
TGTGGACTTGCATGATTATTGGTCTTGTGACAAGTGTTTTGTCAGCCATG
CAAGCTTTCCTTCATTATCGTTTGGATGATAACGAGATGATTGGATTGGT
GGGAGTGTTCCCCTGTTTTGTAGTGTTTGTTCCCTTATGGGAACGGTGTA
AAGTcgactttgaaaaaaagaagatgagAAATGAAGAAAGAATTAACGAT
TTGTAAATTATTGGTCTTGTGACAAGTGTTTTGTCAGCCATGCAAGCTTT
CCTTCATTATCGTTTGGATGATAACGAGATGATTGGATTGGTGGGAGTGT
TCCCCTGTTTTGTAGTGTTTGTTCCCTTATGGGAACGGTGTAAAGTcgac
tttgaaaaaaagaagatgagAAATGAAGAAAGAATTAACGATTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:515830..518873 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 508-699:2853 |
| Aaloc | 370-507:1753 |
| Aaloc | 160-369:984 |
| Aaloc | 1-159:1 |
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