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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:384031..388779+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_045845 ID=XLOC_045845|Name=XLOC_045845|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4749bp|location=Sequence derived from alignment at sc0000268_pilon:384031..388779+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTACATGATCAAAGACAGTAATATGAATGTTTGCTCTTCATCCAT
GAACGGCACAAATGTTCATATCAAGCAAGGTTACCTGCATATCAAGCGTG
AACGCTCATCTTCGCCCGTCACGACGCGCGTTCTTTTCAAGGTGAGATTT
TCTATTCTTTCTTTGCTAGAACGTTGaagttgttgtttgttttggtaATT
TTTCACCAGCGTTACAACTAAGACCGCATAATTAGGGCAATGTTTTTAAC
AGGACTTCCTTGTCGAAGCTTTTAAACCTCTAAATGTAGATTCTTAAATC
TTGTTAAAATATTTAGACCCGATCTCTTAAATAACCTGGGCTTATCTCCT
TCTTTTCTGATAGGCATGGCAGCAAGCATATTTTATCTTACGCCGTGATC
CTTACGTCATCGAAGAATACAAGGACGCCACGTTAAAGGCTCTACGTCAA
CGTCACTTCTTACCGTCAATCAAACACGCCGGTATCATACGGACTTCGAA
ATCGCAACAATATGCTTTCGAAGTGGTCGTCAAAGATGATATCGTTTTGT
TGTTTGGATGTGAGAATCAAATCTTGAGAGAAGAATGGATTCAATCCTTC
ATCGATGTCAAGAGAGTTATCgatgagaaagaaaagaaggaaTCACCCGC
CCTTCAACGCCCTAAACAACAAACACAACACCCTATGCTTGAACGCAAAG
GTAGTTTAAATGGTAAGTTCACAGTAGATTTAACGCTATTTTGACCCCAT
TTTCTAGTTCATTCCTTTGAACTGAATCTATTTTGTCCTCAAAACTTCCT
ATCGATAAGATTTTTGACTTCACCGAAAGGCTTGGGAAGAGCAATATTGG
GTAGGGCCAATTGTACTAAATTTGGCCTTTATCAGACTTAATCCATCTTA
CCTTCAAATCAGATGGTAAAATCAGATTTCTTAGCGTAGGATGAGAGACA
GACTTTGTTGATAAGTTGCACGATCACACTTTAAGTTGTGCAATCTGTTT
ACAGTATTATCTCGAGTTGTTTTCAATCTCCAgataaaaataatcttttt
tatcGCCACACGTAAGATGGGAAATCACAAATATAATGCGGTCAACTCAC
AACTTACGTCATTGTctcataagtttttgaaatGATGTGGCCGCAGAATA
TTCTTATGTCCCTATAAGTTGGAAATTTAGGAAATGTAAGTTTTTAAATG
CGTGACAAacattttagaaatttcatcTTGATAACATCAGTTTCTATCAT
ACGCCTCGTTGGAATCTTGCAAGTTCATCACTTATCTTGAAAATAGACCT
GAACTTACATGATTATTTGTTATTAATGAGACTTCAAGACCTAATCATAT
TTCTCGATCATCAAACTAATAAGTTTCAACTTTCCCCGCCTTTTTCGATG
TTTACTAGACGATattatcgtctacacaagatcactaaaaaaaggaatag
tttaggaggcaGGATAAATTTGGAAATGGTGGTTAGCCCggggcggagta
agcagtggcggaggtaCTTACAgtgttttgttccaaaactttACCGCCAC
TATTTTCCCGTAAACTGTCCTCGTGCCCTGACTCTGCGCATATATACTTT
CCCGCAtttactgacctttaaacggacgatagcatcgtctagatATCGAA
TCACACTTTTCTCTTACAGACACATACCGCGTACGAATTATGGAGAGCTC
TCTTTCCATCGCCAACGAATTGGCGGGCGATTATTTTATCACGCTGACGT
CATCGAGAATGTCGCTACTTTCAATCTGTGATTTGAACGAATTGTTGAGT
TGGCCAATTAACCACGTGACTTATTACACGCACGCCAAGAATCAAGTCAT
CCTGATCATGAGCAGGTCTGTTTGGTTTcggagttttcttcattttctgt
tttgtcTAAAATTCCTTTGTCTAAGGCTTCGAAAAGtctaaataagtttg
agtttatcgacccagtgatattcatatttgAAGTTTCTCGAAAGCCAAAC
GTAAAtttcgtgatccaagccacgataaacttccaatatgctTCGAAAAG
TATTGTAAGACTCGTGGCAGTAGTTTCGAGACACATCAATACTTTCGAAA
ACTTATTTTCCATGTAAGCCTGGTGTCACAAGTAATATTTGATCAGGTTT
AAACCATTTCGAAAGAATAATGCAATAATCCTTTCCTCGAGCCAAGACTC
TACTTACTGATCCCTGGGTGACGTCACTGGTGGCTCATTTTGTTGATGGA
AGTCTTGTTTACTTTAGAGATTAAGCTTCCTGTAACCTTTCAATGTTGAC
ATTGTGTTGTTTTTGGCAAGCCAGAGAACTCATTTCCCCTAGGTTACAAT
GTCAGTACATAACTTCTCTTTTGAAGTAAACTGACACAAAGTATCAGTGT
TTCGAAATGATCTTCCAACTatgattctttgaaaaaatgaaagactCTCC
AATAACGATCACGAGCTAATATTTTATCTTCTATTATCTTCAGATTGTGT
CATTTTGGAAGTGGCAAGTTGATTTTCGAAAGCAAACAATGCGAATCGTT
GATGCGATCTATCGAACTTTTTCACAGCAAGAATCGGGCGGATAGTCCGA
AGTTACGAGCAGGTTCATCTTTTGGAGGATGTTCAGCAAGTTTTTCGTCA
GGATCCGGGTCGCTATCTGATCGTTCACCCTTGCGATTGTCTTGCGATGA
CGATACTGTTTTCGATTCACCCTCCAATCCTATAAATTTCAACTGTGATA
AAATCCAAGAGGAAGCTAGCCGCCCCGAACCAACACCCTACCGCCAAAAT
ACACACCCTAAACTAAAACGCAGTGAAAGAAGTGAAGACTCCTTGCTGTG
TTTCAAAATCGATCAAAATACACCCCAACAACAATCACCGCCCCAACAGC
AATCACCGCCCTCCATCGATAAACATTTTGCAGAAATAACTTCTGAAGAT
GGCTATGTTCTTCCGAACGAACCTGACTGTGATTTCACCGACATCAAACC
GACAATACCTTCTCGACCCGCTTCTCGGTCACCGAATTCCTCCGACAACG
AGAACGAAGCTTCGTCTTCGTATCTACAGATCGTCGATAACGAAGATTCA
TCCGAAGACACAGACGCCAAACGAATGCTTGAGGAAATCAATTCCCAGTT
AACTGATCCACAAAATAAACCAgatgttttcattttaaacgATTTAAGAA
TCTCCTCACCGCTTCAATCACCGAAAATTAAACGAGAAACCAATCGTCGA
TCAAGCGAACCGCCTAAACCTTTCACTTCGACAAAAGAACACATGAAATT
ATCGAAGAACGGGAAGAAAGTTAGCAGTTATAGTGTGGATTCCGGCTCTA
TGATTAACTTCAACTCTCCACAAACCACTCACTTTAACAAGAAAAGCGCT
TTCCCTAAACAACACAGCATCTCACGTGGCAACCATGATTCGGTTTCCGG
CAAAGCAGCCACTGTCAATCCTTTTGATTCCGGCTCATTTTTCATGAACC
CTACAACACATTCACAGCAAATGCATGCTTCCCAATCATTCAGCAAATTC
AAACACAACATGAACTTAAGAAGGAACCAAACTGAATCCGTCCTCTCTAA
ACCTATCATGAGTCCGGAACTAGACCGTAACACAAAACCTAAAAAGCTAT
CGGACACACCCAAAGCACAACCGGAACTCACCATTCAAACAACGGACGTG
GAGGCGCAAGATGGTCCTCCTCCCATCCCTGAACGCATATCACCTACACC
TTTAAAAGACGTTTCAAAACGCAAATTATGTCGTTCGCAAAATCTGGATG
AGATCGATACAGATTCAGCCAATGAGGAACCAGAAATGAAAAACACGCTG
GCACCTCCATTACCTccgaaatcaaaaattttatcgtCCACGCGCTCAGC
CCCAATTCCCGCACGTCTAGATGAAAGTGAAATGGAAGGAGGATGTTTAC
TCAGATGTTCGAGTGTAGGAACAACGCAACGATGTCAACAAAACGGAGAA
ATGACGAGTGAAGAGAACTCTCAAAACTGTTCTTTAGAGGAATCAGCAGA
AACGCCGCCAGAAGTTCCACGCCGCTTGCCAACTCTGGTAAGACTTTATT
TGATAAGTGTTTGGAACTTTCAAATTTCAGTCTTAGAACTTTATATCGTA
AATTCTTTGGAAGtttgatataacattttttattcagGACCTCCTCTAGG
AATGCATAATTTCACTGGCTGATGAAATAatgaatttgtttttgtttttg
cgactttttcgcTCACAGGATGTTATTGGTTAACCACTGATTCGGAAAAT
AACAATTACAATTgttaaattaagaatttttgtgtttttcatgATGTTAC
TTGAAGACTTAAGGCTATTTTAGATATGATCTGATATCCATTGTATTCGA
AATTTCTAGTTAAAATTCTCAGTTTGACAAACAATTTATGATTCTTTCTT
TCTTATAGGCCAAACGTCAGCATTTATCGACTTCAGAAGGCAACCTTCTC
AAGAACGGCTTCAACTTCAAACTGTTCCGCAAAGTATCCAACGAAGGCGA
AAAAGCGAGGCGTCATCGTTCCTTTCATTCTGTAGAAGAAGATCCAAATG
AGAACAACCTTCCAGCTTCACCGCGTCGCATTACCGTTCATGAGTTCGAC
CTCCAAGCGCCGATCTGTGATGAAGGACTTTTAACAGAATGCCCTGTTAA
ACCAAAAGGCTTTAAGAGTATTTCTACTGCTTTTCCGAAACCTAAAAAG Coding sequence (CDS) from alignment at sc0000268_pilon:384031..388779+ >XLOC_045845 ID=XLOC_045845|Name=XLOC_045845|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5142bp|location=Sequence derived from alignment at sc0000268_pilon:384031..388779+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTACATGATCAAAGACAGTAATATGAATGTTTGCTCTTCATCCAT
GAACGGCACAAATGTTCATATCAAGCAAGGTTACCTGCATATCAAGCGTG
AACGCTCATCTTCGCCCGTCACGACGCGCGTTCTTTTCAAGATGGGTTAC
ATGATCAAAGACAGTAATATGAATGTTTGCTCTTCATCCATGAACGGCAC
AAATGTTCATATCAAGCAAGGTTACCTGCATATCAAGCGTGAACGCTCAT
CTTCGCCCGTCACGACGCGCGTTCTTTTCAAGGCATGGCAGCAAGCATAT
TTTATCTTACGCCGTGATCCTTACGTCATCGAAGAATACAAGGACGCCAC
GTTAAAGGCTCTACGTCAACGTCACTTCTTACCGTCAATCAAACACGCCG
GTATCATACGGACTTCGAAATCGCAACAATATGCTTTCGAAGTGGTCGTC
AAAGATGATATCGTTTTGTTGTTTGGATGTGAGAATCAAATCTTGAGAGA
AGAATGGATTCAATCCTTCATCGATGTCAAGAGAGTTATCgatgagaaag
aaaagaaggaaTCACCCGCCCTTCAACGCCCTAAACAACAAACACAACAC
CCTATGCTTGAACGCAAAGGTAGTTTAAATGGCATGGCAGCAAGCATATT
TTATCTTACGCCGTGATCCTTACGTCATCGAAGAATACAAGGACGCCACG
TTAAAGGCTCTACGTCAACGTCACTTCTTACCGTCAATCAAACACGCCGG
TATCATACGGACTTCGAAATCGCAACAATATGCTTTCGAAGTGGTCGTCA
AAGATGATATCGTTTTGTTGTTTGGATGTGAGAATCAAATCTTGAGAGAA
GAATGGATTCAATCCTTCATCGATGTCAAGAGAGTTATCgatgagaaaga
aaagaaggaaTCACCCGCCCTTCAACGCCCTAAACAACAAACACAACACC
CTATGCTTGAACGCAAAGGTAGTTTAAATGACACATACCGCGTACGAATT
ATGGAGAGCTCTCTTTCCATCGCCAACGAATTGGCGGGCGATTATTTTAT
CACGCTGACGTCATCGAGAATGTCGCTACTTTCAATCTGTGATTTGAACG
AATTGTTGAGTTGGCCAATTAACCACGTGACTTATTACACGCACGCCAAG
AATCAAGTCATCCTGATCATGAGCAGACACATACCGCGTACGAATTATGG
AGAGCTCTCTTTCCATCGCCAACGAATTGGCGGGCGATTATTTTATCACG
CTGACGTCATCGAGAATGTCGCTACTTTCAATCTGTGATTTGAACGAATT
GTTGAGTTGGCCAATTAACCACGTGACTTATTACACGCACGCCAAGAATC
AAGTCATCCTGATCATGAGCAGATTGTGTCATTTTGGAAGTGGCAAGTTG
ATTTTCGAAAGCAAACAATGCGAATCGTTGATGCGATCTATCGAACTTTT
TCACAGCAAGAATCGGGCGGATAGTCCGAAGTTACGAGCAGGTTCATCTT
TTGGAGGATGTTCAGCAAGTTTTTCGTCAGGATCCGGGTCGCTATCTGAT
CGTTCACCCTTGCGATTGTCTTGCGATGACGATACTGTTTTCGATTCACC
CTCCAATCCTATAAATTTCAACTGTGATAAAATCCAAGAGGAAGCTAGCC
GCCCCGAACCAACACCCTACCGCCAAAATACACACCCTAAACTAAAACGC
AGTGAAAGAAGTGAAGACTCCTTGCTGTGTTTCAAAATCGATCAAAATAC
ACCCCAACAACAATCACCGCCCCAACAGCAATCACCGCCCTCCATCGATA
AACATTTTGCAGAAATAACTTCTGAAGATGGCTATGTTCTTCCGAACGAA
CCTGACTGTGATTTCACCGACATCAAACCGACAATACCTTCTCGACCCGC
TTCTCGGTCACCGAATTCCTCCGACAACGAGAACGAAGCTTCGTCTTCGT
ATCTACAGATCGTCGATAACGAAGATTCATCCGAAGACACAGACGCCAAA
CGAATGCTTGAGGAAATCAATTCCCAGTTAACTGATCCACAAAATAAACC
AgatgttttcattttaaacgATTTAAGAATCTCCTCACCGCTTCAATCAC
CGAAAATTAAACGAGAAACCAATCGTCGATCAAGCGAACCGCCTAAACCT
TTCACTTCGACAAAAGAACACATGAAATTATCGAAGAACGGGAAGAAAGT
TAGCAGTTATAGTGTGGATTCCGGCTCTATGATTAACTTCAACTCTCCAC
AAACCACTCACTTTAACAAGAAAAGCGCTTTCCCTAAACAACACAGCATC
TCACGTGGCAACCATGATTCGGTTTCCGGCAAAGCAGCCACTGTCAATCC
TTTTGATTCCGGCTCATTTTTCATGAACCCTACAACACATTCACAGCAAA
TGCATGCTTCCCAATCATTCAGCAAATTCAAACACAACATGAACTTAAGA
AGGAACCAAACTGAATCCGTCCTCTCTAAACCTATCATGAGTCCGGAACT
AGACCGTAACACAAAACCTAAAAAGCTATCGGACACACCCAAAGCACAAC
CGGAACTCACCATTCAAACAACGGACGTGGAGGCGCAAGATGGTCCTCCT
CCCATCCCTGAACGCATATCACCTACACCTTTAAAAGACGTTTCAAAACG
CAAATTATGTCGTTCGCAAAATCTGGATGAGATCGATACAGATTCAGCCA
ATGAGGAACCAGAAATGAAAAACACGCTGGCACCTCCATTACCTccgaaa
tcaaaaattttatcgtCCACGCGCTCAGCCCCAATTCCCGCACGTCTAGA
TGAAAGTGAAATGGAAGGAGGATGTTTACTCAGATGTTCGAGTGTAGGAA
CAACGCAACGATGTCAACAAAACGGAGAAATGACGAGTGAAGAGAACTCT
CAAAACTGTTCTTTAGAGGAATCAGCAGAAACGCCGCCAGAAGTTCCACG
CCGCTTGCCAACTCTGATTGTGTCATTTTGGAAGTGGCAAGTTGATTTTC
GAAAGCAAACAATGCGAATCGTTGATGCGATCTATCGAACTTTTTCACAG
CAAGAATCGGGCGGATAGTCCGAAGTTACGAGCAGGTTCATCTTTTGGAG
GATGTTCAGCAAGTTTTTCGTCAGGATCCGGGTCGCTATCTGATCGTTCA
CCCTTGCGATTGTCTTGCGATGACGATACTGTTTTCGATTCACCCTCCAA
TCCTATAAATTTCAACTGTGATAAAATCCAAGAGGAAGCTAGCCGCCCCG
AACCAACACCCTACCGCCAAAATACACACCCTAAACTAAAACGCAGTGAA
AGAAGTGAAGACTCCTTGCTGTGTTTCAAAATCGATCAAAATACACCCCA
ACAACAATCACCGCCCCAACAGCAATCACCGCCCTCCATCGATAAACATT
TTGCAGAAATAACTTCTGAAGATGGCTATGTTCTTCCGAACGAACCTGAC
TGTGATTTCACCGACATCAAACCGACAATACCTTCTCGACCCGCTTCTCG
GTCACCGAATTCCTCCGACAACGAGAACGAAGCTTCGTCTTCGTATCTAC
AGATCGTCGATAACGAAGATTCATCCGAAGACACAGACGCCAAACGAATG
CTTGAGGAAATCAATTCCCAGTTAACTGATCCACAAAATAAACCAgatgt
tttcattttaaacgATTTAAGAATCTCCTCACCGCTTCAATCACCGAAAA
TTAAACGAGAAACCAATCGTCGATCAAGCGAACCGCCTAAACCTTTCACT
TCGACAAAAGAACACATGAAATTATCGAAGAACGGGAAGAAAGTTAGCAG
TTATAGTGTGGATTCCGGCTCTATGATTAACTTCAACTCTCCACAAACCA
CTCACTTTAACAAGAAAAGCGCTTTCCCTAAACAACACAGCATCTCACGT
GGCAACCATGATTCGGTTTCCGGCAAAGCAGCCACTGTCAATCCTTTTGA
TTCCGGCTCATTTTTCATGAACCCTACAACACATTCACAGCAAATGCATG
CTTCCCAATCATTCAGCAAATTCAAACACAACATGAACTTAAGAAGGAAC
CAAACTGAATCCGTCCTCTCTAAACCTATCATGAGTCCGGAACTAGACCG
TAACACAAAACCTAAAAAGCTATCGGACACACCCAAAGCACAACCGGAAC
TCACCATTCAAACAACGGACGTGGAGGCGCAAGATGGTCCTCCTCCCATC
CCTGAACGCATATCACCTACACCTTTAAAAGACGTTTCAAAACGCAAATT
ATGTCGTTCGCAAAATCTGGATGAGATCGATACAGATTCAGCCAATGAGG
AACCAGAAATGAAAAACACGCTGGCACCTCCATTACCTccgaaatcaaaa
attttatcgtCCACGCGCTCAGCCCCAATTCCCGCACGTCTAGATGAAAG
TGAAATGGAAGGAGGATGTTTACTCAGATGTTCGAGTGTAGGAACAACGC
AACGATGTCAACAAAACGGAGAAATGACGAGTGAAGAGAACTCTCAAAAC
TGTTCTTTAGAGGAATCAGCAGAAACGCCGCCAGAAGTTCCACGCCGCTT
GCCAACTCTGGCCAAACGTCAGCATTTATCGACTTCAGAAGGCAACCTTC
TCAAGAACGGCTTCAACTTCAAACTGTTCCGCAAAGTATCCAACGAAGGC
GAAAAAGCGAGGCGTCATCGTTCCTTTCATTCTGTAGAAGAAGATCCAAA
TGAGAACAACCTTCCAGCTTCACCGCGTCGCATTACCGTTCATGAGTTCG
ACCTCCAAGCGCCGATCTGTGATGAAGGACTTTTAACAGAATGCCCTGTT
AAACCAAAAGGCTTTAAGAGTATTTCTACTGCTTTTCCGAAACCTAAAAA
GGCCAAACGTCAGCATTTATCGACTTCAGAAGGCAACCTTCTCAAGAACG
GCTTCAACTTCAAACTGTTCCGCAAAGTATCCAACGAAGGCGAAAAAGCG
AGGCGTCATCGTTCCTTTCATTCTGTAGAAGAAGATCCAAATGAGAACAA
CCTTCCAGCTTCACCGCGTCGCATTACCGTTCATGAGTTCGACCTCCAAG
CGCCGATCTGTGATGAAGGACTTTTAACAGAATGCCCTGTTAAACCAAAA
GGCTTTAAGAGTATTTCTACTGCTTTTCCGAAACCTAAAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:384031..388779 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2281-2571:4459 |
| Aaloc | 688-2280:2495 |
| Aaloc | 493-684:1672 |
| Aaloc | 142-489:364 |
| Aaloc | 1-141:1 |
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