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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:979408..982311+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005216 ID=XLOC_005216|Name=XLOC_005216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2904bp|location=Sequence derived from alignment at sc0000098_pilon:979408..982311+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCTGCATATTCTGTCTACGCATCACGTTTACGAAAGGTGGAAAACCA
AGAGACAATCAAAAATGCAATCCAAAGGATACTTCAGATTCAAATCGACA
TGAAAAATTATAACCTGATCAGTGGAACAGAACTTAAAGGTTATATCTCA
AGCCAGAATATGAAACCTAGCTTTTATCTAGAGGATAAAAGAAATTCGGT
TGCTTTTAGCAATCAATTATATCAAAGTATTTTAGAAGAGTTAATACCAA
AGCATTTAAACGAAAAAGAGGTACTAAATATTGGATACGATTTATACCAA
TGGACGATAAGCACAATGTTGTCAAACCttgatttgaatgaaaaattgga
agccattctcaaaaaatatcaaagccTTGTCAATTCCAATAGCGAGAAGA
CTCTTATCAAAGATGTTATTGGTCAATCGATGGCGGGCAATTTTCAAATT
CCCGATGTTAAGTCTGAAGTGGGCAGCTTTCAAGGGACCAAAGCAATCAC
TGAGGAAATGCAAGAATGTTGGAAAGAGATGATCGATGCAGTGCACTTCA
AGCAACCTGTTCTCTTGACTGGTGATAGCGGTTGTGGAAAATCAACGACC
ATCGATGTGCTGGCAAGACTTTGTGGCAAGAAAGTTATACATCTCTACGT
TACACCAGAAACTGAATCAGAGGCTTTGGTTGGCCAAAATGAACCAGACA
AAGAAAAGGTCGTCGCTTGGTCTGATGGTATTGTTACTAAAGCTTACAAA
GAGGGATATTGGCTTGTTATCGAGAACATATCTGAAGCACAGAGTACTGT
TTTGGAAAGGTTGAATTCTGTTCTTGAAACTCCACCGCAATGGTTAACCA
CAGAAAATGTTGGACTAAAAGAGGAAGAAGTCAATCAAAACCCGGCTGAC
GACTTTCGAGTATTCGCAACGATGACACCTCCACGAAGTAAACTATCTGA
GCATCTTTCTGGTGCAAACATTACTACAAATGCTGAACTTTCTCCTGCTT
TGTACAATCGATTCAGTATTATCCACATGAAAAATACGCTTAAATCGATT
GACTCTCTTTTGCTCATGTACAACGTGATGGCAGATGATGTTTTGAAGAA
ACACGCTAAAACATTCACTCAAATGTTTGATAAAGTTAGATCGATATCGG
ATAAGAAGGTTGTCACACTGCATCATTTTGAGAGAGTCGTTAAAACTGCA
AACAAACTTGTTGAATCAAAGTTCAATGTTGATCCTATCTGTGAACTTTT
CACTGGCATTAAACTCCATCTACTGGGAATGTTTCAAAGAGAAGATCAAG
ATGAaattgaaaaggtgattttcgATTTCTTCCCACAATACTCGTGTGAT
TTAACCAAGTACGGAGAACTTCTGAACTTGGATCCAGAAGGTGACAAAGA
TGGTTCTTACATTATCTCAAAAGCTGCTTCTTCATCAAGATATGAAATTG
CTTGCAAGTTATCAATCGCTTTCTTTTGTGATTACCCTTGCTTACTTGAA
GGACCTGCTTCCTGCGGAAAATCAAGCTTGGTTAAGCATATCGCTAAAAT
AAACAAACTGAAATTGGAATACATTAACAATACTGAAAGCACAACAATGA
ATGATTATGTTGGCTCCTTTCTGCCTGGGGGAGCATACTCAAAAGGTCCA
CTTGTTGAAGCTATGGAGAAAGGCCATTATTTTCTAGCCGACGAGTTTGA
TCTTGCTGAGCCAGCAGTTATGAATATGCTTTACCCATTGCTGGAAGGAA
AGAAGCAAATCACCATCCCAAACAGCAGTCGTGTGATATCAGCCCATCCA
AACTTTCGTTTCATTGCAGCACAAAATGGAGTGTCTTATCCCGGACGAAA
AGAGCTGCCAAAAAGTTTACGATCAAGATTTTCAGAAGTCTATTTCCAAG
AATTCACTGAAGACGAAATAAAAGCAATAatctcaaaaaagatttcatat
tTATCCACTGATGATGCGAAAATACTCGATGCAGATGCTGAGAAATTCGC
CAAGATATTTAGCAAAATAAATTCACCCACTGAAAGATCTAACCAATTTA
GACGCCAAGTCAACTTAACTTTACGAGATCTGTTAAAATGGTTAAATCGA
AAGGAAGTGTTTCCTGCAGCAAAGCTCAGCCTGCTCGGCTTCGAGTTGCT
TTACTGTCGTATTAAGGATAGAGATGGACGAATGGTTCTTGCAAAAATAT
TCAAGGAGACTTTCGATGACTTTGCTTTTGATGGAGATTTGAATCGCGTT
CAGCCTGAGATTTTCGTTGACGAATTCGGAAAGTTGGTGAATACTAACAA
CCCACACGTTTCTGTTAAAATGGCTAACGTGCTATGGATATCAGATGAAT
TGAAAGAAGAGATCAAAAGGTCTACCCAGAGTTTCCAAGAAGACTTATGG
AATGTTTGCATCGCTCTAGAATGCAATGAATCTATCCTTTTAATGGGACC
AACATCCTACAAGTCGCATTTAATCTCCACCTGGATAAAGATGAAAGACC
GCAGCGATGTGGAATATATTCTCTGTAACAACTCTACCGACTCAGCAGAT
ATGTTAGGGAGACTCCGCCCATATTCAGAAATTGAATGCCTTAAACTGGC
TATCACCAATTCCAAGCAATATTTGAATTACTGTAAACAACTTGTAGCTC
AACACTCAAGCTACGATGATGCCTCTTTCTACGACCAAAGACTGGAATCT
GcggagaaaaagttgaaaatttttgaatctgCTGTTCAAAGCCTGGAAAC
AGATAGCAGCAAGGTCGACGAAATCcaatacaacaacaacaaacctCCAG
AGAAGGAAGTCAGTAACAAGAAAGAATCGACAGGAACGATTGACCACCAT
AGCGATCATACCACAGAAGACATTTCTGACAACGTTCAAAACGATAATAA
TACA Coding sequence (CDS) from alignment at sc0000098_pilon:979408..982311+ >XLOC_005216 ID=XLOC_005216|Name=XLOC_005216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5808bp|location=Sequence derived from alignment at sc0000098_pilon:979408..982311+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCTGCATATTCTGTCTACGCATCACGTTTACGAAAGGTGGAAAACCA
AGAGACAATCAAAAATGCAATCCAAAGGATACTTCAGATTCAAATCGACA
TGAAAAATTATAACCTGATCAGTGGAACAGAACTTAAAGGTTATATCTCA
AGCCAGAATATGAAACCTAGCTTTTATCTAGAGGATAAAAGAAATTCGGT
TGCTTTTAGCAATCAATTATATCAAAGTATTTTAGAAGAGTTAATACCAA
AGCATTTAAACGAAAAAGAGGTACTAAATATTGGATACGATTTATACCAA
TGGACGATAAGCACAATGTTGTCAAACCttgatttgaatgaaaaattgga
agccattctcaaaaaatatcaaagccTTGTCAATTCCAATAGCGAGAAGA
CTCTTATCAAAGATGTTATTGGTCAATCGATGGCGGGCAATTTTCAAATT
CCCGATGTTAAGTCTGAAGTGGGCAGCTTTCAAGGGACCAAAGCAATCAC
TGAGGAAATGCAAGAATGTTGGAAAGAGATGATCGATGCAGTGCACTTCA
AGCAACCTGTTCTCTTGACTGGTGATAGCGGTTGTGGAAAATCAACGACC
ATCGATGTGCTGGCAAGACTTTGTGGCAAGAAAGTTATACATCTCTACGT
TACACCAGAAACTGAATCAGAGGCTTTGGTTGGCCAAAATGAACCAGACA
AAGAAAAGGTCGTCGCTTGGTCTGATGGTATTGTTACTAAAGCTTACAAA
GAGGGATATTGGCTTGTTATCGAGAACATATCTGAAGCACAGAGTACTGT
TTTGGAAAGGTTGAATTCTGTTCTTGAAACTCCACCGCAATGGTTAACCA
CAGAAAATGTTGGACTAAAAGAGGAAGAAGTCAATCAAAACCCGGCTGAC
GACTTTCGAGTATTCGCAACGATGACACCTCCACGAAGTAAACTATCTGA
GCATCTTTCTGGTGCAAACATTACTACAAATGCTGAACTTTCTCCTGCTT
TGTACAATCGATTCAGTATTATCCACATGAAAAATACGCTTAAATCGATT
GACTCTCTTTTGCTCATGTACAACGTGATGGCAGATGATGTTTTGAAGAA
ACACGCTAAAACATTCACTCAAATGTTTGATAAAGTTAGATCGATATCGG
ATAAGAAGGTTGTCACACTGCATCATTTTGAGAGAGTCGTTAAAACTGCA
AACAAACTTGTTGAATCAAAGTTCAATGTTGATCCTATCTGTGAACTTTT
CACTGGCATTAAACTCCATCTACTGGGAATGTTTCAAAGAGAAGATCAAG
ATGAaattgaaaaggtgattttcgATTTCTTCCCACAATACTCGTGTGAT
TTAACCAAGTACGGAGAACTTCTGAACTTGGATCCAGAAGGTGACAAAGA
TGGTTCTTACATTATCTCAAAAGCTGCTTCTTCATCAAGATATGAAATTG
CTTGCAAGTTATCAATCGCTTTCTTTTGTGATTACCCTTGCTTACTTGAA
GGACCTGCTTCCTGCGGAAAATCAAGCTTGGTTAAGCATATCGCTAAAAT
AAACAAACTGAAATTGGAATACATTAACAATACTGAAAGCACAACAATGA
ATGATTATGTTGGCTCCTTTCTGCCTGGGGGAGCATACTCAAAAGGTCCA
CTTGTTGAAGCTATGGAGAAAGGCCATTATTTTCTAGCCGACGAGTTTGA
TCTTGCTGAGCCAGCAGTTATGAATATGCTTTACCCATTGCTGGAAGGAA
AGAAGCAAATCACCATCCCAAACAGCAGTCGTGTGATATCAGCCCATCCA
AACTTTCGTTTCATTGCAGCACAAAATGGAGTGTCTTATCCCGGACGAAA
AGAGCTGCCAAAAAGTTTACGATCAAGATTTTCAGAAGTCTATTTCCAAG
AATTCACTGAAGACGAAATAAAAGCAATAatctcaaaaaagatttcatat
tTATCCACTGATGATGCGAAAATACTCGATGCAGATGCTGAGAAATTCGC
CAAGATATTTAGCAAAATAAATTCACCCACTGAAAGATCTAACCAATTTA
GACGCCAAGTCAACTTAACTTTACGAGATCTGTTAAAATGGTTAAATCGA
AAGGAAGTGTTTCCTGCAGCAAAGCTCAGCCTGCTCGGCTTCGAGTTGCT
TTACTGTCGTATTAAGGATAGAGATGGACGAATGGTTCTTGCAAAAATAT
TCAAGGAGACTTTCGATGACTTTGCTTTTGATGGAGATTTGAATCGCGTT
CAGCCTGAGATTTTCGTTGACGAATTCGGAAAGTTGGTGAATACTAACAA
CCCACACGTTTCTGTTAAAATGGCTAACGTGCTATGGATATCAGATGAAT
TGAAAGAAGAGATCAAAAGGTCTACCCAGAGTTTCCAAGAAGACTTATGG
AATGTTTGCATCGCTCTAGAATGCAATGAATCTATCCTTTTAATGGGACC
AACATCCTACAAGTCGCATTTAATCTCCACCTGGATAAAGATGAAAGACC
GCAGCGATGTGGAATATATTCTCTGTAACAACTCTACCGACTCAGCAGAT
ATGTTAGGGAGACTCCGCCCATATTCAGAAATTGAATGCCTTAAACTGGC
TATCACCAATTCCAAGCAATATTTGAATTACTGTAAACAACTTGTAGCTC
AACACTCAAGCTACGATGATGCCTCTTTCTACGACCAAAGACTGGAATCT
GcggagaaaaagttgaaaatttttgaatctgCTGTTCAAAGCCTGGAAAC
AGATAGCAGCAAGGTCGACGAAATCcaatacaacaacaacaaacctCCAG
AGAAGGAAGTCAGTAACAAGAAAGAATCGACAGGAACGATTGACCACCAT
AGCGATCATACCACAGAAGACATTTCTGACAACGTTCAAAACGATAATAA
TACAAAAGCTGCATATTCTGTCTACGCATCACGTTTACGAAAGGTGGAAA
ACCAAGAGACAATCAAAAATGCAATCCAAAGGATACTTCAGATTCAAATC
GACATGAAAAATTATAACCTGATCAGTGGAACAGAACTTAAAGGTTATAT
CTCAAGCCAGAATATGAAACCTAGCTTTTATCTAGAGGATAAAAGAAATT
CGGTTGCTTTTAGCAATCAATTATATCAAAGTATTTTAGAAGAGTTAATA
CCAAAGCATTTAAACGAAAAAGAGGTACTAAATATTGGATACGATTTATA
CCAATGGACGATAAGCACAATGTTGTCAAACCttgatttgaatgaaaaat
tggaagccattctcaaaaaatatcaaagccTTGTCAATTCCAATAGCGAG
AAGACTCTTATCAAAGATGTTATTGGTCAATCGATGGCGGGCAATTTTCA
AATTCCCGATGTTAAGTCTGAAGTGGGCAGCTTTCAAGGGACCAAAGCAA
TCACTGAGGAAATGCAAGAATGTTGGAAAGAGATGATCGATGCAGTGCAC
TTCAAGCAACCTGTTCTCTTGACTGGTGATAGCGGTTGTGGAAAATCAAC
GACCATCGATGTGCTGGCAAGACTTTGTGGCAAGAAAGTTATACATCTCT
ACGTTACACCAGAAACTGAATCAGAGGCTTTGGTTGGCCAAAATGAACCA
GACAAAGAAAAGGTCGTCGCTTGGTCTGATGGTATTGTTACTAAAGCTTA
CAAAGAGGGATATTGGCTTGTTATCGAGAACATATCTGAAGCACAGAGTA
CTGTTTTGGAAAGGTTGAATTCTGTTCTTGAAACTCCACCGCAATGGTTA
ACCACAGAAAATGTTGGACTAAAAGAGGAAGAAGTCAATCAAAACCCGGC
TGACGACTTTCGAGTATTCGCAACGATGACACCTCCACGAAGTAAACTAT
CTGAGCATCTTTCTGGTGCAAACATTACTACAAATGCTGAACTTTCTCCT
GCTTTGTACAATCGATTCAGTATTATCCACATGAAAAATACGCTTAAATC
GATTGACTCTCTTTTGCTCATGTACAACGTGATGGCAGATGATGTTTTGA
AGAAACACGCTAAAACATTCACTCAAATGTTTGATAAAGTTAGATCGATA
TCGGATAAGAAGGTTGTCACACTGCATCATTTTGAGAGAGTCGTTAAAAC
TGCAAACAAACTTGTTGAATCAAAGTTCAATGTTGATCCTATCTGTGAAC
TTTTCACTGGCATTAAACTCCATCTACTGGGAATGTTTCAAAGAGAAGAT
CAAGATGAaattgaaaaggtgattttcgATTTCTTCCCACAATACTCGTG
TGATTTAACCAAGTACGGAGAACTTCTGAACTTGGATCCAGAAGGTGACA
AAGATGGTTCTTACATTATCTCAAAAGCTGCTTCTTCATCAAGATATGAA
ATTGCTTGCAAGTTATCAATCGCTTTCTTTTGTGATTACCCTTGCTTACT
TGAAGGACCTGCTTCCTGCGGAAAATCAAGCTTGGTTAAGCATATCGCTA
AAATAAACAAACTGAAATTGGAATACATTAACAATACTGAAAGCACAACA
ATGAATGATTATGTTGGCTCCTTTCTGCCTGGGGGAGCATACTCAAAAGG
TCCACTTGTTGAAGCTATGGAGAAAGGCCATTATTTTCTAGCCGACGAGT
TTGATCTTGCTGAGCCAGCAGTTATGAATATGCTTTACCCATTGCTGGAA
GGAAAGAAGCAAATCACCATCCCAAACAGCAGTCGTGTGATATCAGCCCA
TCCAAACTTTCGTTTCATTGCAGCACAAAATGGAGTGTCTTATCCCGGAC
GAAAAGAGCTGCCAAAAAGTTTACGATCAAGATTTTCAGAAGTCTATTTC
CAAGAATTCACTGAAGACGAAATAAAAGCAATAatctcaaaaaagatttc
atattTATCCACTGATGATGCGAAAATACTCGATGCAGATGCTGAGAAAT
TCGCCAAGATATTTAGCAAAATAAATTCACCCACTGAAAGATCTAACCAA
TTTAGACGCCAAGTCAACTTAACTTTACGAGATCTGTTAAAATGGTTAAA
TCGAAAGGAAGTGTTTCCTGCAGCAAAGCTCAGCCTGCTCGGCTTCGAGT
TGCTTTACTGTCGTATTAAGGATAGAGATGGACGAATGGTTCTTGCAAAA
ATATTCAAGGAGACTTTCGATGACTTTGCTTTTGATGGAGATTTGAATCG
CGTTCAGCCTGAGATTTTCGTTGACGAATTCGGAAAGTTGGTGAATACTA
ACAACCCACACGTTTCTGTTAAAATGGCTAACGTGCTATGGATATCAGAT
GAATTGAAAGAAGAGATCAAAAGGTCTACCCAGAGTTTCCAAGAAGACTT
ATGGAATGTTTGCATCGCTCTAGAATGCAATGAATCTATCCTTTTAATGG
GACCAACATCCTACAAGTCGCATTTAATCTCCACCTGGATAAAGATGAAA
GACCGCAGCGATGTGGAATATATTCTCTGTAACAACTCTACCGACTCAGC
AGATATGTTAGGGAGACTCCGCCCATATTCAGAAATTGAATGCCTTAAAC
TGGCTATCACCAATTCCAAGCAATATTTGAATTACTGTAAACAACTTGTA
GCTCAACACTCAAGCTACGATGATGCCTCTTTCTACGACCAAAGACTGGA
ATCTGcggagaaaaagttgaaaatttttgaatctgCTGTTCAAAGCCTGG
AAACAGATAGCAGCAAGGTCGACGAAATCcaatacaacaacaacaaacct
CCAGAGAAGGAAGTCAGTAACAAGAAAGAATCGACAGGAACGATTGACCA
CCATAGCGATCATACCACAGAAGACATTTCTGACAACGTTCAAAACGATA
ATAATACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000098_pilon | genome | sc0000098_pilon:979408..982311 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2904:1 |
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