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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000412_pilon:217030..221233+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015044 ID=XLOC_015044|Name=XLOC_015044|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4204bp|location=Sequence derived from alignment at sc0000412_pilon:217030..221233+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTACAAATTTTGTACAACCTTGACGTAAGATCACTATGTGTAATGGC
TCGTACAGGGCACGATATGAGTAACATTTGTCAAAGTGAAACGGTTTGGA
AGAAAATAATTCAACGGGACTTTGGTAAGCTCGatattattattaaaatc
aTATATTTCTATGACaatatactcttaggttccaaataaacggggggggg
gggaggttggaaaGTTTTCGAGGTTTCAATAAactgtacttctgaaaacc
caaaaaggtaaatataggctaaattGGTCTTCTCCTTTCTCGGATTTTCT
TCAGAAATGAGATTTGTCGTAGAAAGTGCTATTTtcggacctacctccgg
gtaccccggtggaggtcccaTAAATTAACCcctgtccgtccgttcgtccg
tttgtccgtccgtctgttaccagcttttctcaagattggctcattagttt
tttctgattttttgcacaatgatacaaaatggcaatgcccagaacgtgac
ggagcccgattttcgagaaaaaattcatttgggcaaatttgggccaaaaa
gtacctaaaaatagggttttttggacgttgcaaaatcctgtcattacttt
tttctgattttttgtaaaaagatggagggcaagattctctaaagaatggc
tttTCTTATAATCGGTtgtattttcattcaaaaacattattgatagcaat
gcccaccatcaagcatgtttcaattttcaaaaaaattgatttttgaagcc
ggaactattaaaaattcgccggaacaacctattttcgccggaaagatagt
atttcttgaatttcttaagctatactttatatttttttatgaaattttgc
acactgatgtaaaatgataatacctaaaatgtgacggaacccgatttttg
aaaaacatttttttccggccgaaaatgccggaaacatgtatgccggaaaa
acctgatttttgcagatgcgtattcgcaatgcttaAAACATAgcagagtt
cgatttttgagaaaaaaaattttccggttgaaaatgccggaaatcgcggt
ttttgcagattttcatttgactttttccttatttctttgttgtttttttc
acacaaaaacattattgataacaatgcccaccattaagcatgattgtcaa
taaaacagatttttgcaaccggaactttctatttctattttccctactcc
ccttccctcatcccccatcaacaatcaatgataaaattaaatgcgttatg
cattttcgcaaaaCACTATATtgtctgactgattgttttcatttttctcc
ttatttctatctagctttcatcatcaggtattATTATCCATacagcggtc
attaagtaaaccgttaaaggttcaatcggcgggcggtattgaaaggtttt
gtgactcaaattgtcatacccgcgctgaggaaattaaagcgccaggcttc
agagggctaaaatatcattaacggcccgggtatagggcaataacgtcatt
tgcggcccgctcggaatgggattgaagtcgttgcattgaagcgaagagac
taaactaacgtcagaaaaaaacacttttcggtcatttgcggcccgctcgc
aaggtgctaaaaatttgttgaagacattgcattgaagcgtAAAGAATTgg
ttgacgctagaaaaaaacgttgtttgaatgtgcGATATGGAtgataatag
taatagcgttaagttttcgttcgttgatgtcattaattctgcccttgcaa
tttgattattagccctctagtgccatttgcgccctccgcttcgcgtcggg
accaaatgacactatcgggcgaataatcaaactacgcgggcagaaaatga
caacaacgacctcaaactgaacgctattgttataggtccattcagcatgt
tgcttgtttaatctattataattaaatattatttttaacagGTACCAAGT
GCGAAGAATATTCACCAAATGTAAGTCCGTCTATAATGAAATAGGTAAAC
ATTTTAAACAGGAGGatattattttcaagatttgaatttttccaaacagt
attccgaaaactatttttaaaatattttaaattgtcttttttggaTGGTG
GAAGCCCTATCCATTACACTGAACTAAGTGATGGGGTGGTGATCTTTTTG
AAAGCGAGCGAAAATCAGTTAGTGCTCATTATGATTTGGAGTAACCCACC
TTCTCCGGTCCTTTGGgagtttttctaaaattgttgtcatttttccTAGG
CTTATaaaagattaaagagagaagaaagaagagccaaagaagaaatggag
agacaaagaCGTGAGGCTGATGAGCTGAGAAACATGAGGCCAGAATTTAT
TCCCATGCGTGAAGATTCACCTGACTATCTACGTCTCGTCGCTCCCAATT
CTAGAATCCCTGGGATGATAGGTAAAATTGTAACAAATATCAGTATTATG
CCTTTTACACTTTTTCttattaagaacaaactatataagaacagggGAGA
AAAAATTGATTCAACAAGTGATTCAGCTCATCCTATCTATTTTCTTATCA
CTGAACAAGAGTGACATGTTAAATATTTTCGAGATCCGTAgttaactcgg
gtttttttaactcgggttttccgggtcTCGTTAAATAAGGGTATGCCGAA
GTTAGACCAATTTGCAATAACTAGCAAGCTTGAAGTGTAAGGATTTGAGT
GTGGCTGAAAATCTATTATGCAATTTTTCCGGACAAAGTTGGGCAGAAAG
TATTTGCATGGATGAAAATCAAAATCGcaattttatgcaatttattttat
tttgattattcaatggcattttccaaatatccattttaattaCCTCGACA
ATTGATTATTTGAAAGTCCATAACTCAACTATCTTTTGACGATTTTACTT
TATCAAAAACCCGTTCCGCTTTTTCTCGGGCACGCTCGAGATATTGTAGG
CTGCACACCTCCCCTCTGATCTGTTTTGATATAGGTGATGCTgattgtgt
ataaaattcctgTCCGTCAGTTACCCGAAATTTGGctaacctgtttcaat
tttctttaaaatctttagaAATCCAATGGTTGTATTAACCTTtagccatt
caaatttctaattcaaatttaataaaacttAAAGATCTCTCATATaaaac
ttactaatcaagcaaatcaagtttctaaaactcaaaaacagaaagacggg
ggtaactctcggacgggaattttatacacaataCGCATCAAAACATATGA
GGGGGAGATGTCAGCCTAAATATTTTACTGGTTTAATTTCAGGTGGACGT
TATGACTTGATACCTGGACAATTCCCGGACATTGGGGCACCACGGAACGA
CCCTCTACGTATCGGACAACCAAGACGTGGCGGCAGTAAgatgattttta
ttttggaaGGAGATTCCATACATGTTTCTTATGTCTTTTCAAATTAGTAA
ATTGATTACGCTCTTTttctttcataagaacaattttataagaacaatga
ggatTAAAGTCGCGAAAAAAGAAGATCAATTTAAGTAAAATGTTGAGCCT
GaatttactcaatttcaagcaatttggGGGGAGTAGTGAAAATTGGGTAA
TTTCAccttataaataagaacaggataagaacaatttgaggctcaaagta
ccaaaaaataagaacatccgagcctcatcaaaaatttactggttcttatg
aaaataaAAGAGTATTGTAATAATTTTATACATCTGACTTGGCCGAAAAA
CATTCAGTGTTATAAGAAAGATAATatcgaaatcaaaaatcaaaacatcg
gTGTTAAGGCCAATCGAagcaaatcaaaatgagaacaAAACTTTTGGTTG
ATTTTCTAGCCGGTCAATTTTCCTCATAAAATTGAATGCCGAGTAATCTA
GTTACTCATGaagtattttttcttatttatcgTCTGATCAAGTAAGAAGC
CACATTGTAAAGTTTTGTTAATGTTCCTATTCATCAACAACTATCTTTAC
CTTTTTCTGACAGATGGTATTCCGGTTGGTCGTGGCATAGTCCCGGGTGC
CCGCTTTGACCCGTACGGCCCCATACCAGATGATGACGACTTTCCTGGTG
GTCCTCCTCTACAACCAGATGTTTTGCAACGCCCTCGCTTCGGGCGTGGG
AATGGATTCGGAGGTGGCGGCGCAAACTTTGGTGGTGGTAGTGGGTTTAT
TTAA Coding sequence (CDS) from alignment at sc0000412_pilon:217030..221233+ >XLOC_015044 ID=XLOC_015044|Name=XLOC_015044|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1218bp|location=Sequence derived from alignment at sc0000412_pilon:217030..221233+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTACAAATTTTGTACAACCTTGACGTAAGATCACTATGTGTAATGGC
TCGTACAGGGCACGATATGAGTAACATTTGTCAAAGTGAAACGGTTTGGA
AGAAAATAATTCAACGGGACTTTGCAGCTACAAATTTTGTACAACCTTGA
CGTAAGATCACTATGTGTAATGGCTCGTACAGGGCACGATATGAGTAACA
TTTGTCAAAGTGAAACGGTTTGGAAGAAAATAATTCAACGGGACTTTGGT
ACCAAGTGCGAAGAATATTCACCAAATGTACCAAGTGCGAAGAATATTCA
CCAAATGCTTATaaaagattaaagagagaagaaagaagagccaaagaaga
aatggagagacaaagaCGTGAGGCTGATGAGCTGAGAAACATGAGGCCAG
AATTTATTCCCATGCGTGAAGATTCACCTGACTATCTACGTCTCGTCGCT
CCCAATTCTAGAATCCCTGGGATGATAGGCTTATaaaagattaaagagag
aagaaagaagagccaaagaagaaatggagagacaaagaCGTGAGGCTGAT
GAGCTGAGAAACATGAGGCCAGAATTTATTCCCATGCGTGAAGATTCACC
TGACTATCTACGTCTCGTCGCTCCCAATTCTAGAATCCCTGGGATGATAG
GTGGACGTTATGACTTGATACCTGGACAATTCCCGGACATTGGGGCACCA
CGGAACGACCCTCTACGTATCGGACAACCAAGACGTGGCGGCAGTGGACG
TTATGACTTGATACCTGGACAATTCCCGGACATTGGGGCACCACGGAACG
ACCCTCTACGTATCGGACAACCAAGACGTGGCGGCAATGGTATTCCGGTT
GGTCGTGGCATAGTCCCGGGTGCCCGCTTTGACCCGTACGGCCCCATACC
AGATGATGACGACTTTCCTGGTGGTCCTCCTCTACAACCAGATGTTTTGC
AACGCCCTCGCTTCGGGCGTGGGAATGGATTCGGAGGTGGCGGCGCAAAC
TTTGGTGGTGGTAGTGGGTTTATTTAAATGGTATTCCGGTTGGTCGTGGC
ATAGTCCCGGGTGCCCGCTTTGACCCGTACGGCCCCATACCAGATGATGA
CGACTTTCCTGGTGGTCCTCCTCTACAACCAGATGTTTTGCAACGCCCTC
GCTTCGGGCGTGGGAATGGATTCGGAGGTGGCGGCGCAAACTTTGGTGGT
GGTAGTGGGTTTATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000412_pilon | genome | sc0000412_pilon:217030..221233 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 421-609:4016 |
| Aaloc | 328-417:3295 |
| Aaloc | 154-324:2250 |
| Aaloc | 127-153:1944 |
| Aaloc | 1-123:1 |
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