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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:108380..112544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035235 ID=XLOC_035235|Name=XLOC_035235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4165bp|location=Sequence derived from alignment at sc0000252_pilon:108380..112544- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGGAGAAAAAAACACAAAATAAAAATAGAAAAAAAACACATAGGAT
GGAGAATGAAGATGAAGACTTTGCATTGGCTTTGAAACTGTTCACTGAAC
TAAATGAGGGCGAAGGAGAGCAATCACAGTCCGTAAAAGGAGGTAAACCT
GATGAAAAACTCTCCATCGTTGATCCAAGTTGGGAGTTAATCGATCCTGT
ACCAAATATTCATGAACTTTTCGTCCAATTCAACGCAGCTTATTTTGATG
GGATGCTGGCTAGTGTATCCGTACAATGGAGCCCAAGGATGACCTTGTAA
GATTTGATCAATCTTCCCTTGCTCATTTCTTTTTTTCCCAGATCATTTTT
AATAAGTATAACGGAAAAAACTTTTTATGTGACTGCCACAATGTTTGATT
AAAATTAACAGAGTGGATAGTGTATTTTACGGTGTGCAAACCTATGACAT
TCTAAGATTTTGAATAATGTCCAACTGATACCGACACAAGGATCTATTTT
ATCCAAATATGTCGACACGGGACTTGAAATGTTAAGCGAAAATAAAGTTA
CATTTACTTTCATTTGTTGTCTGAAAGAGGTTACCTGGTCCAAAGATCCA
CTTTGAAGCTAATTCCCTTCCTTTGTCTGAAAGTTTCTTTTGACAAAAAG
CTCAGTCCTTTTTGAATTTGAGAGTTTCCGACAAAGATAATAAGACCAAC
ATGATCTAAACAAATAAATGTGCTTCTGTTTATAGCCAGGTTATGAACAG
TACCTCATTTGTCATTCCGTAAAAGTTCGTTGACTTATCAGACGTGTTTA
AAGTGGGGGCGTACGGTTTTTCGGAATTGCGGAAATCGACCCTTTTTTCT
TCGGTATTTCGGAATTCTAAAATTGTTTCGGAATGGAAAATCCATAATTT
TTTGCTTCGAAATTTCGGTATTATAAAGTTTTTATCCCCTTTTTTCGGAA
TTCATACACGAAAAATCAAATTTGATGAAAAATTAGTCAAAACGAAGAAA
AATACCCAAAAAAAATCGGTATCGGAATTGCAAGTACTCTTTTACGGAAT
TCCGGAAACTTTGGCAAAGTTATTCGGTATTTCGGCAATCGCAAAACCCG
TACGCCCCCCCCTTTAAACGAAAAGCAGTAGGTCAGGTGACCTACTTTAT
TTGTTCATAAATTCGATTGTTGACGATCCAAATAATCATTATCCTCTACA
GAGTATCGCTTTTTGATGTGGAAACTTTTGAGGTTTTTTGGAATGCGATG
TTTGTCTGGTCGTGGTTTGACCTGCCATCTGGGGAAGCTCTATTTGGGTG
TAATGAAGGTTTCAAAATGTGAAACCAATATGTTTTTAGTGGTTTTCGCA
CATGTTACTCCCATCTTGCTGACTATACTAATATATTTGTTTTATTATGT
GACTGGAATTTCGCACATGCTTCTTCTATTCTATATTGCTGGCTACAATT
TATGTATATATGGCTACAATAATTTTCAAATTACGAAATCATACAGCTTG
GATATTATTACTCTCTTAAAGATTTGGCCATTAGAAAATATTTTCTCAGT
TATTCATCAGAAAAATGCTTCATCCCTCTTTCCTTAGATGTGCTGGTTTG
TGCTACTATGAGCGGCGTGGCAAGTGTTGCTCCATCAAATTAAGTGCACC
CTTATTGAAACTTCGTCCGCGAAAAGACTTGGTAGAAACACTCCTTGTAA
GAATACTCTCCTTGTACAATTCTTCCTCTGTCGGGATTACTATTCACGGC
CATGTCTGTCTCTGAAAACTTATTAAGTGAACGTAGTTAAAACTAAATTG
AAATTGAATTTAATTGAAACCTTTGTTATTAAATTCATTTTCGAAAAGCT
GGTAAAATTGTTTTTTACTTTTCAGCATGAAATGATTCACGCTTTACTGT
TTGTCACAGATAATAACAAGGTACTGTTCTGTTCTTGTTTATTCGTATTT
CCGGGCGGGGGGGGGGGGGTCGGGTTGGGCTCAAGATAAATGACCTACCA
TACGTGTGGCCCTTAAGGGTATATTTCCCAAGCTTCCCAAAGTGCACCAT
AAGGGTCGAAATCAGCAAAGATGAGAAAATTGCACTGGGTGTAAAATTTC
GAAAATCTGACGATATTTTGCCTGAAAATGGTCAAAAAATTTCAAGAAAA
TACACCTTAAGGGTCGATTTTTCGCTCAAACTTGCTCAAATTTTGCAAAA
TTTACTCTGCACTGCAAGGGTCCGATTTCAAAGGCCTAATTTTGGTACGC
ACGTGAATCTTGCCAATAGCACTTTCTGTTGGTTTCTTTAAAGAAGGTAA
CACAAATTGGTTTTCCGTTGGTTAATGTTCTAATAAAAACTGTCGTGTCC
ATTTTTGAAACCTTGCTATCGATTTCGCCCTCGTTAGTTGAATCATAACA
TGGATCTACATTATGAACACAAAATGTCACGCCTATCTCGACCTCATTTC
CGTAGATATAAGATGCAGACCATTCTACACTTTTCACTTTTCTTTTGTAG
GATCACGATGGACATGGACCAGAATTTCACAAACACATGTACCGAATCAA
TAAAGAGACTGGGACCAACATTACAGTATGAATCTTTTCATTATCAACAT
TTATGCCAATATTTCAGAGATTTTCCATTTTCACGTGCTTTGAAAATTCC
TACAGTGTCTTCTTTCGTGATTTAACCAACAATTAGCTTGTGCGGATGCA
AAATTGAGTCAAAATTGATATGACAATCTAAAATATTTGACTTTGATTTC
ATTTCATCCACTTTTTAGGTTTATCATTCTTTTCACGACGAGGTAAGCAA
GATATTTGTTTACTATTTGATCTGGATGTCATTCGCCCATTAAAACCTAT
TGCATGAACTTCAGTGTGTTTTTTTCAAGCATTGCATCGTAAATTTATTT
TCTTTTAGGTGGATCACCATAGACAACATTGGTGGCGTTGTGATGGTCCT
TGTGTTAAACGCCCTCCTTTCTTCGGCATCGTCAGGCGTGCTATGAATCG
AGCGCCCTCTCCGCGCGACCGCTGGTGGAATGACCACAAACAAAAATGTG
GAGGAGCTTTCACGAAAATCAAGGAGCCAGAGAAACCGGTGAAGCAATCT
AAGAAAAGTAAAAAGTTAGAAGAAACTGGACAAAAACTTGGTTCCTCAAG
TTCTGAAAGCAACAAAAATAATAAGAATGCAATCACAAACTGGTTTCAGA
AAACAGATCCTTCAAAACCTTCTACTTCGTCTAACATATCTAACCCCACC
AGCATAGATTGTGAAGAAGATCTGAAACCTCCAGTAAACCCGTGGGCAGA
CGATAGTTACACCAGTAATTCAAAGAACAGTAAACCAACAAGCAAAACTA
ATTCTAACCCTAAGACAAAAAACAATACTTCGAACCATGGAAACCAAAAC
AAAGGTAAATACCCAGCAGGCTCAACAGCCGTTAAAGGAGGTGGGTCGCG
AACTTCAACTATCACCTCCAAGGGGAAGAACCCTCCGACCAATGAGAATG
ACATTTATCGGAGCTCCTCCACAGGTGCTTCAAGCAATATCTACGGCTTC
AAAATGTCTGCTAATAACAAAGAAGACTCAGCAAAGCAACCCTTAGCCTC
CTTTTCAGGCAACGGTAAACGAATAAGCTCAACAAATGACGAACCTTCGG
GAAACAGTGGACGAGAAAATTTTTTGAAACGATTAGAAAATAACATGAAA
GGGAATACTCAAAGAAAACCCTCAACAAATTCATCACAAATTAGTATCCC
TCCCTCTTCAAACACTTTCCGTAAACCAAAAGATTCTGATTTCTCAATGA
AAAACCAAAATAAGGACAGAACTCAAAAGAAAGAAACCACTGAAAAAACT
CCTCCGAATCAACCCTCGTTCTCAAGAAATCCTACAACAAACCAAAACAA
GTCTCCCTATACTAACAAACAACCACATGACGCTTCATCAAATTTAACAA
ACACTAAACGAAACCTTTCGTCTTCTTCTTCACAAAACTCTTCATCAAAC
TCACCGAAAAAGATTAAATTTTTGAAAGAAACGCACATGGTTATTTCTTC
AGACGAAGAGGACAATGTACAGCAACAACAAAATCTTGTGGATTGCCCTG
CGTGTCCTATGAGAGTTCCTGAACATCTTTTGAATGAACACTTGGATGAA
TGCTTAACTTCTTGA Coding sequence (CDS) from alignment at sc0000252_pilon:108380..112544- >XLOC_035235 ID=XLOC_035235|Name=XLOC_035235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3612bp|location=Sequence derived from alignment at sc0000252_pilon:108380..112544- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGGAGAAAAAAACACAAAATAAAAATAGAAAAAAAACACATAGGAT
GGAGAATGAAGATGAAGACTTTGCATTGGCTTTGAAACTGTTCACTGAAC
TAAATGAGGGCGAAGGAGAGCAATCACAGTCCGTAAAAGGAGGTAAACCT
GATGAAAAACTCTCCATCGTTGATCCAAGTTGGGAGTTAATCGATCCTGT
ACCAAATATTCATGAACTTTTCGTCCAATTCAACGCAGCTTATTTTGATG
GGATGCTGGCTAGTGTATCCGTACAATGGAGCCCAAGGATGACCTTTTTC
AGGAGAAAAAAACACAAAATAAAAATAGAAAAAAAACACATAGGATGGAG
AATGAAGATGAAGACTTTGCATTGGCTTTGAAACTGTTCACTGAACTAAA
TGAGGGCGAAGGAGAGCAATCACAGTCCGTAAAAGGAGGTAAACCTGATG
AAAAACTCTCCATCGTTGATCCAAGTTGGGAGTTAATCGATCCTGTACCA
AATATTCATGAACTTTTCGTCCAATTCAACGCAGCTTATTTTGATGGGAT
GCTGGCTAGTGTATCCGTACAATGGAGCCCAAGGATGACCTTATGTGCTG
GTTTGTGCTACTATGAGCGGCGTGGCAAGTGTTGCTCCATCAAATTAAGT
GCACCCTTATTGAAACTTCGTCCGCGAAAAGACTTGGTAGAAACACTCCT
TATGTGCTGGTTTGTGCTACTATGAGCGGCGTGGCAAGTGTTGCTCCATC
AAATTAAGTGCACCCTTATTGAAACTTCGTCCGCGAAAAGACTTGGTAGA
AACACTCCTTCATGAAATGATTCACGCTTTACTGTTTGTCACAGATAATA
ACAAGCATGAAATGATTCACGCTTTACTGTTTGTCACAGATAATAACAAG
GATCACGATGGACATGGACCAGAATTTCACAAACACATGTACCGAATCAA
TAAAGAGACTGGGACCAACATTACAGATCACGATGGACATGGACCAGAAT
TTCACAAACACATGTACCGAATCAATAAAGAGACTGGGACCAACATTACA
GTTTATCATTCTTTTCACGACGAGGTTTATCATTCTTTTCACGACGAGGT
GGATCACCATAGACAACATTGGTGGCGTTGTGATGGTCCTTGTGTTAAAC
GCCCTCCTTTCTTCGGCATCGTCAGGCGTGCTATGAATCGAGCGCCCTCT
CCGCGCGACCGCTGGTGGAATGACCACAAACAAAAATGTGGAGGAGCTTT
CACGAAAATCAAGGAGCCAGAGAAACCGGTGAAGCAATCTAAGAAAAGTA
AAAAGTTAGAAGAAACTGGACAAAAACTTGGTTCCTCAAGTTCTGAAAGC
AACAAAAATAATAAGAATGCAATCACAAACTGGTTTCAGAAAACAGATCC
TTCAAAACCTTCTACTTCGTCTAACATATCTAACCCCACCAGCATAGATT
GTGAAGAAGATCTGAAACCTCCAGTAAACCCGTGGGCAGACGATAGTTAC
ACCAGTAATTCAAAGAACAGTAAACCAACAAGCAAAACTAATTCTAACCC
TAAGACAAAAAACAATACTTCGAACCATGGAAACCAAAACAAAGGTAAAT
ACCCAGCAGGCTCAACAGCCGTTAAAGGAGGTGGGTCGCGAACTTCAACT
ATCACCTCCAAGGGGAAGAACCCTCCGACCAATGAGAATGACATTTATCG
GAGCTCCTCCACAGGTGCTTCAAGCAATATCTACGGCTTCAAAATGTCTG
CTAATAACAAAGAAGACTCAGCAAAGCAACCCTTAGCCTCCTTTTCAGGC
AACGGTAAACGAATAAGCTCAACAAATGACGAACCTTCGGGAAACAGTGG
ACGAGAAAATTTTTTGAAACGATTAGAAAATAACATGAAAGGGAATACTC
AAAGAAAACCCTCAACAAATTCATCACAAATTAGTATCCCTCCCTCTTCA
AACACTTTCCGTAAACCAAAAGATTCTGATTTCTCAATGAAAAACCAAAA
TAAGGACAGAACTCAAAAGAAAGAAACCACTGAAAAAACTCCTCCGAATC
AACCCTCGTTCTCAAGAAATCCTACAACAAACCAAAACAAGTCTCCCTAT
ACTAACAAACAACCACATGACGCTTCATCAAATTTAACAAACACTAAACG
AAACCTTTCGTCTTCTTCTTCACAAAACTCTTCATCAAACTCACCGAAAA
AGATTAAATTTTTGAAAGAAACGCACATGGTTATTTCTTCAGACGAAGAG
GACAATGTACAGCAACAACAAAATCTTGTGGATTGCCCTGCGTGTCCTAT
GAGAGTTCCTGAACATCTTTTGAATGAACACTTGGATGAATGCTTAACTT
CTTGAGTGGATCACCATAGACAACATTGGTGGCGTTGTGATGGTCCTTGT
GTTAAACGCCCTCCTTTCTTCGGCATCGTCAGGCGTGCTATGAATCGAGC
GCCCTCTCCGCGCGACCGCTGGTGGAATGACCACAAACAAAAATGTGGAG
GAGCTTTCACGAAAATCAAGGAGCCAGAGAAACCGGTGAAGCAATCTAAG
AAAAGTAAAAAGTTAGAAGAAACTGGACAAAAACTTGGTTCCTCAAGTTC
TGAAAGCAACAAAAATAATAAGAATGCAATCACAAACTGGTTTCAGAAAA
CAGATCCTTCAAAACCTTCTACTTCGTCTAACATATCTAACCCCACCAGC
ATAGATTGTGAAGAAGATCTGAAACCTCCAGTAAACCCGTGGGCAGACGA
TAGTTACACCAGTAATTCAAAGAACAGTAAACCAACAAGCAAAACTAATT
CTAACCCTAAGACAAAAAACAATACTTCGAACCATGGAAACCAAAACAAA
GGTAAATACCCAGCAGGCTCAACAGCCGTTAAAGGAGGTGGGTCGCGAAC
TTCAACTATCACCTCCAAGGGGAAGAACCCTCCGACCAATGAGAATGACA
TTTATCGGAGCTCCTCCACAGGTGCTTCAAGCAATATCTACGGCTTCAAA
ATGTCTGCTAATAACAAAGAAGACTCAGCAAAGCAACCCTTAGCCTCCTT
TTCAGGCAACGGTAAACGAATAAGCTCAACAAATGACGAACCTTCGGGAA
ACAGTGGACGAGAAAATTTTTTGAAACGATTAGAAAATAACATGAAAGGG
AATACTCAAAGAAAACCCTCAACAAATTCATCACAAATTAGTATCCCTCC
CTCTTCAAACACTTTCCGTAAACCAAAAGATTCTGATTTCTCAATGAAAA
ACCAAAATAAGGACAGAACTCAAAAGAAAGAAACCACTGAAAAAACTCCT
CCGAATCAACCCTCGTTCTCAAGAAATCCTACAACAAACCAAAACAAGTC
TCCCTATACTAACAAACAACCACATGACGCTTCATCAAATTTAACAAACA
CTAAACGAAACCTTTCGTCTTCTTCTTCACAAAACTCTTCATCAAACTCA
CCGAAAAAGATTAAATTTTTGAAAGAAACGCACATGGTTATTTCTTCAGA
CGAAGAGGACAATGTACAGCAACAACAAAATCTTGTGGATTGCCCTGCGT
GTCCTATGAGAGTTCCTGAACATCTTTTGAATGAACACTTGGATGAATGC
TTAACTTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252_pilon | genome | sc0000252_pilon:108380..112544 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 550-1806:1258 |
| Aaloc | 526-549:1398 |
| Aaloc | 451-525:1666 |
| Aaloc | 406-450:2291 |
| Aaloc | 298-405:2578 |
| Aaloc | 1-294:4166 |
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