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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000196_pilon:421073..423322- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042490 ID=XLOC_042490|Name=XLOC_042490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2250bp|location=Sequence derived from alignment at sc0000196_pilon:421073..423322- (Clytia hemisphaerica_ch_hm2_pilon)
CGTCAGTTTGCCCACCCTTCCTTAAAACAATTACTATCCTTAATTAATAA
GGCAGGCATCCCATGGTCCAACAATCACGAACTAAAGGAAGAACTAAAAA
AGGTAGATGCTGAATGCACCACCTGCCAAGTGTATCAAAAGGCCCCACCT
AAGCCAATTGTTGGCTTACCAATGGCAACCCAATTTCAAGAAACAGTAGC
TATGGACCTGAAATTTTATGATAGCAAAATCATTCTCCATTTGATTGACA
TGTGCACCAGATTGTCTTCAGCTACAACTATCAAGAACAAAAACCCAAAC
ACAGTCATAGAAGCCATCTTCAAAGTTTGGATTTCAGTGTATGGAACACC
TGAAAAATTCTTAGTCGACAATGGAGGTGAATTTGCCAATGCTGATTTCA
TGGACCTTGCTGAGCAATTTGGAATCACCATCAAAACAACAGCTGCCGAA
TCACCCTGGTCCAATGGAATTGTGGAAAGACACAACCTCACTATTGCCAA
CATGTTGGATAAGGTGCTACACGACACTGACTGTAGCTTCGACATGGCAC
TTTCTTGGTGTACCAATGCCAAAAATTCACTAGCAAATGTTCATGGATTC
TCTTCCTACCAATTGGCAATTGGAACTAATCCACGATTACCGTCAGTCAC
CACAGACAAACCCCCTGCCTTATCTGGTGAACCAGCAACAAAGTTGATCA
AAACGAACCTTGATGCATTACATAAGGCTAGGGAAGCCTTCATCCAAAGT
GAACATTCAGAAAGAATAAGAAGAGCCTTGTCACATAACATCCGTACTTC
AAGTGATGTGAAGTATGTTACTGGTGATCAGGTGTACTACAAACGAAAGG
ACTCGAGTGAATGGCATGGACCCGGCATTGTATTGGGACAAGATGGACAA
CAAGTACTAATCAAACATAGCAGCTATTATGTTAGAGTACATCCCTGTCG
AGTAAAACTGGTTCATTCTTCAGTTCAACAGTCGGAAGACAACAATCGTG
ATAGACTACAAGAAAAGACAACAACTGATCATGTCAACAGTACTACAACT
CCCATCAACAATAACATGCAAGAAAACCATGCTTTGTTCTCTGATGAATC
TGATGTCGATTCTGAAAATAACACACAACCACAAATCACGCCAACCAATG
ATGAGACAAATAGAATACAATCAAACAGCTCAAACAGCCATACCAGAAAG
GTTGCCCAAAGAAAACCATCACAGATCCCTGTAAAGATAAAACCTAAGAT
CAATATTCGCTTCCAAAACAAAAACAACGAATGGGTCAATGCAAAAATAC
TATCAAGAGCTGGGAAGGTCGGCGGTAAGCACGACGGATGGTTCAACATT
GAAACTGCAGATGGAGCCAAGAAATCAGTCAATTTCAAAAGCATCAAGGA
CATCGAGATTGAAGATGACGACGATAGTGAAACATCAATCTCAACAAACC
TATTTCAGAGTAATGACAATGAGGTGTTAAATGCTAAAGAAAAAGAACTG
ACTTCTTGGAAGTCCCAAGATGTTTATCTTGAGGTTGAAAATACTGGGCA
AAGTGTAATGTCCCTTAGATGGGTTATTACCCCAAAAGTCATCAATGGTC
AACCATCAGTGAAGGCAAGACTCGTCGCTAGGGGCTTTGAGGAAATCCAA
GACTTCCGTACAGATAGCCCAACATGCTCCAAAGAAGGATTACGAGTAGC
ACTACTCATGTTGGTATCTCATTCTTGGTCGTTACATTCACTTGACGTAA
AGAAAGCTTTCTTACAAGGTGAATCCATCAACAGGGATCTCTATGTAAAA
CCTCCAAAAGAAGCTGGTACAAACAAATTATGGAAACTTCGGAAAACTGT
TTATGGCCTAGCTGATGCAAGCCGGAGTTGGTATTTGAAATTACGAACTG
AATTGATCAAGTTGAAAGGAAAGCCTGTCTCTTTAGACCAAGGAATCTTT
CTTTGGTTCAATGGATCAACGCTGTTTGGTCTCATGGCTTGCTTTGTCGA
TGATGTCCTATGGGCAGGAACCAACCAATTCGTCAAGATAATCGACAAAC
TGAAAGAGACATTCAGTATAGGAGCTGAGTTCAACACCGATTTCAAGTAC
ATTGGAATACACCTTCAGCAAAATGACGATTGTACAATCAAAATTGATCA
AAATGATTACGTCAAGGATTTGGAAGTCATTAGTCTGGCTCAAGAAAGGA
AGAACCTCACGAAACAAGAACCTGTTAATGAAGCTGAAAGGTCACAAATC
Coding sequence (CDS) from alignment at sc0000196_pilon:421073..423322- >XLOC_042490 ID=XLOC_042490|Name=XLOC_042490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4500bp|location=Sequence derived from alignment at sc0000196_pilon:421073..423322- (Clytia hemisphaerica_ch_hm2_pilon)
CGTCAGTTTGCCCACCCTTCCTTAAAACAATTACTATCCTTAATTAATAA
GGCAGGCATCCCATGGTCCAACAATCACGAACTAAAGGAAGAACTAAAAA
AGGTAGATGCTGAATGCACCACCTGCCAAGTGTATCAAAAGGCCCCACCT
AAGCCAATTGTTGGCTTACCAATGGCAACCCAATTTCAAGAAACAGTAGC
TATGGACCTGAAATTTTATGATAGCAAAATCATTCTCCATTTGATTGACA
TGTGCACCAGATTGTCTTCAGCTACAACTATCAAGAACAAAAACCCAAAC
ACAGTCATAGAAGCCATCTTCAAAGTTTGGATTTCAGTGTATGGAACACC
TGAAAAATTCTTAGTCGACAATGGAGGTGAATTTGCCAATGCTGATTTCA
TGGACCTTGCTGAGCAATTTGGAATCACCATCAAAACAACAGCTGCCGAA
TCACCCTGGTCCAATGGAATTGTGGAAAGACACAACCTCACTATTGCCAA
CATGTTGGATAAGGTGCTACACGACACTGACTGTAGCTTCGACATGGCAC
TTTCTTGGTGTACCAATGCCAAAAATTCACTAGCAAATGTTCATGGATTC
TCTTCCTACCAATTGGCAATTGGAACTAATCCACGATTACCGTCAGTCAC
CACAGACAAACCCCCTGCCTTATCTGGTGAACCAGCAACAAAGTTGATCA
AAACGAACCTTGATGCATTACATAAGGCTAGGGAAGCCTTCATCCAAAGT
GAACATTCAGAAAGAATAAGAAGAGCCTTGTCACATAACATCCGTACTTC
AAGTGATGTGAAGTATGTTACTGGTGATCAGGTGTACTACAAACGAAAGG
ACTCGAGTGAATGGCATGGACCCGGCATTGTATTGGGACAAGATGGACAA
CAAGTACTAATCAAACATAGCAGCTATTATGTTAGAGTACATCCCTGTCG
AGTAAAACTGGTTCATTCTTCAGTTCAACAGTCGGAAGACAACAATCGTG
ATAGACTACAAGAAAAGACAACAACTGATCATGTCAACAGTACTACAACT
CCCATCAACAATAACATGCAAGAAAACCATGCTTTGTTCTCTGATGAATC
TGATGTCGATTCTGAAAATAACACACAACCACAAATCACGCCAACCAATG
ATGAGACAAATAGAATACAATCAAACAGCTCAAACAGCCATACCAGAAAG
GTTGCCCAAAGAAAACCATCACAGATCCCTGTAAAGATAAAACCTAAGAT
CAATATTCGCTTCCAAAACAAAAACAACGAATGGGTCAATGCAAAAATAC
TATCAAGAGCTGGGAAGGTCGGCGGTAAGCACGACGGATGGTTCAACATT
GAAACTGCAGATGGAGCCAAGAAATCAGTCAATTTCAAAAGCATCAAGGA
CATCGAGATTGAAGATGACGACGATAGTGAAACATCAATCTCAACAAACC
TATTTCAGAGTAATGACAATGAGGTGTTAAATGCTAAAGAAAAAGAACTG
ACTTCTTGGAAGTCCCAAGATGTTTATCTTGAGGTTGAAAATACTGGGCA
AAGTGTAATGTCCCTTAGATGGGTTATTACCCCAAAAGTCATCAATGGTC
AACCATCAGTGAAGGCAAGACTCGTCGCTAGGGGCTTTGAGGAAATCCAA
GACTTCCGTACAGATAGCCCAACATGCTCCAAAGAAGGATTACGAGTAGC
ACTACTCATGTTGGTATCTCATTCTTGGTCGTTACATTCACTTGACGTAA
AGAAAGCTTTCTTACAAGGTGAATCCATCAACAGGGATCTCTATGTAAAA
CCTCCAAAAGAAGCTGGTACAAACAAATTATGGAAACTTCGGAAAACTGT
TTATGGCCTAGCTGATGCAAGCCGGAGTTGGTATTTGAAATTACGAACTG
AATTGATCAAGTTGAAAGGAAAGCCTGTCTCTTTAGACCAAGGAATCTTT
CTTTGGTTCAATGGATCAACGCTGTTTGGTCTCATGGCTTGCTTTGTCGA
TGATGTCCTATGGGCAGGAACCAACCAATTCGTCAAGATAATCGACAAAC
TGAAAGAGACATTCAGTATAGGAGCTGAGTTCAACACCGATTTCAAGTAC
ATTGGAATACACCTTCAGCAAAATGACGATTGTACAATCAAAATTGATCA
AAATGATTACGTCAAGGATTTGGAAGTCATTAGTCTGGCTCAAGAAAGGA
AGAACCTCACGAAACAAGAACCTGTTAATGAAGCTGAAAGGTCACAAATC
CGTCAGTTTGCCCACCCTTCCTTAAAACAATTACTATCCTTAATTAATAA
GGCAGGCATCCCATGGTCCAACAATCACGAACTAAAGGAAGAACTAAAAA
AGGTAGATGCTGAATGCACCACCTGCCAAGTGTATCAAAAGGCCCCACCT
AAGCCAATTGTTGGCTTACCAATGGCAACCCAATTTCAAGAAACAGTAGC
TATGGACCTGAAATTTTATGATAGCAAAATCATTCTCCATTTGATTGACA
TGTGCACCAGATTGTCTTCAGCTACAACTATCAAGAACAAAAACCCAAAC
ACAGTCATAGAAGCCATCTTCAAAGTTTGGATTTCAGTGTATGGAACACC
TGAAAAATTCTTAGTCGACAATGGAGGTGAATTTGCCAATGCTGATTTCA
TGGACCTTGCTGAGCAATTTGGAATCACCATCAAAACAACAGCTGCCGAA
TCACCCTGGTCCAATGGAATTGTGGAAAGACACAACCTCACTATTGCCAA
CATGTTGGATAAGGTGCTACACGACACTGACTGTAGCTTCGACATGGCAC
TTTCTTGGTGTACCAATGCCAAAAATTCACTAGCAAATGTTCATGGATTC
TCTTCCTACCAATTGGCAATTGGAACTAATCCACGATTACCGTCAGTCAC
CACAGACAAACCCCCTGCCTTATCTGGTGAACCAGCAACAAAGTTGATCA
AAACGAACCTTGATGCATTACATAAGGCTAGGGAAGCCTTCATCCAAAGT
GAACATTCAGAAAGAATAAGAAGAGCCTTGTCACATAACATCCGTACTTC
AAGTGATGTGAAGTATGTTACTGGTGATCAGGTGTACTACAAACGAAAGG
ACTCGAGTGAATGGCATGGACCCGGCATTGTATTGGGACAAGATGGACAA
CAAGTACTAATCAAACATAGCAGCTATTATGTTAGAGTACATCCCTGTCG
AGTAAAACTGGTTCATTCTTCAGTTCAACAGTCGGAAGACAACAATCGTG
ATAGACTACAAGAAAAGACAACAACTGATCATGTCAACAGTACTACAACT
CCCATCAACAATAACATGCAAGAAAACCATGCTTTGTTCTCTGATGAATC
TGATGTCGATTCTGAAAATAACACACAACCACAAATCACGCCAACCAATG
ATGAGACAAATAGAATACAATCAAACAGCTCAAACAGCCATACCAGAAAG
GTTGCCCAAAGAAAACCATCACAGATCCCTGTAAAGATAAAACCTAAGAT
CAATATTCGCTTCCAAAACAAAAACAACGAATGGGTCAATGCAAAAATAC
TATCAAGAGCTGGGAAGGTCGGCGGTAAGCACGACGGATGGTTCAACATT
GAAACTGCAGATGGAGCCAAGAAATCAGTCAATTTCAAAAGCATCAAGGA
CATCGAGATTGAAGATGACGACGATAGTGAAACATCAATCTCAACAAACC
TATTTCAGAGTAATGACAATGAGGTGTTAAATGCTAAAGAAAAAGAACTG
ACTTCTTGGAAGTCCCAAGATGTTTATCTTGAGGTTGAAAATACTGGGCA
AAGTGTAATGTCCCTTAGATGGGTTATTACCCCAAAAGTCATCAATGGTC
AACCATCAGTGAAGGCAAGACTCGTCGCTAGGGGCTTTGAGGAAATCCAA
GACTTCCGTACAGATAGCCCAACATGCTCCAAAGAAGGATTACGAGTAGC
ACTACTCATGTTGGTATCTCATTCTTGGTCGTTACATTCACTTGACGTAA
AGAAAGCTTTCTTACAAGGTGAATCCATCAACAGGGATCTCTATGTAAAA
CCTCCAAAAGAAGCTGGTACAAACAAATTATGGAAACTTCGGAAAACTGT
TTATGGCCTAGCTGATGCAAGCCGGAGTTGGTATTTGAAATTACGAACTG
AATTGATCAAGTTGAAAGGAAAGCCTGTCTCTTTAGACCAAGGAATCTTT
CTTTGGTTCAATGGATCAACGCTGTTTGGTCTCATGGCTTGCTTTGTCGA
TGATGTCCTATGGGCAGGAACCAACCAATTCGTCAAGATAATCGACAAAC
TGAAAGAGACATTCAGTATAGGAGCTGAGTTCAACACCGATTTCAAGTAC
ATTGGAATACACCTTCAGCAAAATGACGATTGTACAATCAAAATTGATCA
AAATGATTACGTCAAGGATTTGGAAGTCATTAGTCTGGCTCAAGAAAGGA
AGAACCTCACGAAACAAGAACCTGTTAATGAAGCTGAAAGGTCACAAATC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000196_pilon | genome | sc0000196_pilon:421073..423322 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2250:2251 |
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