XLOC_013136 (mRNA) -

Overview
NameXLOC_013136
Unique NameXLOC_013136
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000228_pilon:209989..210600+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013136 ID=XLOC_013136|Name=XLOC_013136|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=612bp|location=Sequence derived from alignment at sc0000228_pilon:209989..210600+ (Clytia hemisphaerica_ch_hm2_pilon)
TACCTCGCAATACCAAAGATATCTGAATATAGCCTATCGGCTATGGCTGT ATCCAAAAGTTTCCCCACTCGTTTAGAACATGTTGATCAAAATTGCAATA ACTTTATTTCTATAGGAGTGACATACAAAGATTTTTGTCCGATCGAACCA TTCATTCCAATCTATCTCATTGTCGGTGGATCATTCGGTATCGTCAAAAT GCTCTCCATCATAATTCAGCGAATCACATATAACGGAGATATCTTTCAAA GCGATAAAAGCAACGAGGAGGAGCTTCCAATCGCATGGTTGTTCGTTGAC GGCGTATTAAACTTGTTTTTATTCACGTGGTTCGTGGCGGGAAACATATG GGTGTATTCCAAATATAAACCAAATTACACGCCCCCGTCCCATCAACCGT TTAACTATTGTAATAAAACCATGTACGTGTTTGCTTTCTGGGTGATCACA ACCAGTTACCTGATGTTAGGATTGATTTGTTTGTGCACGTGTTGCTTAGC CGCGTGCGCGAGCTGTACGGCGTTCTTTTTAACGAAAGCATCGAATTCAG AGGTGGGTGCAGAAGATGAGGTGAATGGTGGTGATAGGTTTATTGATAAC CGTTTTCGATAA

Coding sequence (CDS) from alignment at sc0000228_pilon:209989..210600+

>XLOC_013136 ID=XLOC_013136|Name=XLOC_013136|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000228_pilon:209989..210600+ (Clytia hemisphaerica_ch_hm2_pilon)
TACCTCGCAATACCAAAGATATCTGAATATAGCCTATCGGCTATGGCTGT
ATCCAAAAGTTTCCCCACTCGTTTAGAACATGTTGATCAAAATTGCAATA
ACTTTATTTCTATAGGAGTGACATACAAAGATTTTTGTCCGATCGAACCA
TTCATTCCAATCTATCTCATTGTCGGTGGATCATTCGGTATCGTCAAAAT
GCTCTCCATCATAATTCAGCGAATCACATATAACGGAGATATCTTTCAAA
GCGATAAAAGCAACGAGGAGGAGCTTCCAATCGCATGGTTGTTCGTTGAC
GGCGTATTAAACTTGTTTTTATTCACGTGGTTCGTGGCGGGAAACATATG
GGTGTATTCCAAATATAAACCAAATTACACGCCCCCGTCCCATCAACCGT
TTAACTATTGTAATAAAACCATGTACGTGTTTGCTTTCTGGGTGATCACA
ACCAGTTACCTGATGTTAGGATTGATTTGTTTGTGCACGTGTTGCTTAGC
CGCGTGCGCGAGCTGTACGGCGTTCTTTTTAACGAAAGCATCGAATTCAG
AGGTGGGTGCAGAAGATGAGGTGAATGGTGGTGATAGGTTTATTGATAAC
CGTTTTCGATAATACCTCGCAATACCAAAGATATCTGAATATAGCCTATC
GGCTATGGCTGTATCCAAAAGTTTCCCCACTCGTTTAGAACATGTTGATC
AAAATTGCAATAACTTTATTTCTATAGGAGTGACATACAAAGATTTTTGT
CCGATCGAACCATTCATTCCAATCTATCTCATTGTCGGTGGATCATTCGG
TATCGTCAAAATGCTCTCCATCATAATTCAGCGAATCACATATAACGGAG
ATATCTTTCAAAGCGATAAAAGCAACGAGGAGGAGCTTCCAATCGCATGG
TTGTTCGTTGACGGCGTATTAAACTTGTTTTTATTCACGTGGTTCGTGGC
GGGAAACATATGGGTGTATTCCAAATATAAACCAAATTACACGCCCCCGT
CCCATCAACCGTTTAACTATTGTAATAAAACCATGTACGTGTTTGCTTTC
TGGGTGATCACAACCAGTTACCTGATGTTAGGATTGATTTGTTTGTGCAC
GTGTTGCTTAGCCGCGTGCGCGAGCTGTACGGCGTTCTTTTTAACGAAAG
CATCGAATTCAGAGGTGGGTGCAGAAGATGAGGTGAATGGTGGTGATAGG
TTTATTGATAACCGTTTTCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_013136XLOC_013136-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000228_pilongenomesc0000228_pilon:209989..210600 +
Properties
Property NameValue
Aaloc88-633:67
Aaloc49-75:40
Aaloc7-45:1