XLOC_033605 (gene) - C. hemisphaerica

Overview
NameXLOC_033605
Unique NameXLOC_033605
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_227:475721..484311-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033605 ID=XLOC_033605|Name=XLOC_033605|organism=Clytia hemisphaerica|type=gene|length=8591bp|location=Sequence derived from alignment at scaffold_227:475721..484311- (Clytia hemisphaerica)
AAGGCTTTCTCTAAAAATTAAAACTGTTTTGACACAAATGACCCAACAAT TTAGAAATGACCAGCTTAAAACTAATACGTCCCATGAAAACTTCATAAAA GATGCTAGGCCATAAATCAAACACATCTCCAAGTTTTTTCTCAAAAATAT TTGTTTTATCTTAGGACTGGTGGCGAAGAAACTCTGAAATTGCCAATCAT GGTAACACCACCCAACAATGTGCTCAATAATACACAACATGATTTTCGAA ACGTGGAAAGGTAATTGAATTTGTATAAATTCATAATATTTCTGTACATG ATGGCTTATTGAGGCTTCTCAGTTTATGACCCAGAGGGAAGGTACACAGA GATACATCAACTCTATAATTAATTGCACGACAGAGAAGGAATCGAAACCT GACTCTTCTGTATGGCAATCAAGATTACACCTATGATATACACTCGTGTT AATTATAACCAATCTATTGCAACTGCAATTTTTTCATTGGTTCACGCTTA TTCTTTTTTTTTTTGTAGCTTGATGACTCCTGGAAGTGGAGCTGCGAATA ACTTGAACGGAGCTGCGAATAACTTGAACGGAGCTGCAAATAACTTGAAT GGAACCCCAAACCTAAACGAAACCCCAAACGGAAATGGCCAATTTCTAGA TCCCAATGTTGTAAGGTAAGGAATACATAATTTTCTGCTGATAATGACAT GCTTAAATCTCAGTCTAANTAACTTGAATGGAACCCCAAACCTAAACGAA ACCCCAAACGGAAATGGCCAATTTCTAGATCCCAATGTTGTAAGGTAAGG AATACACATTTTTCTGCTGATAATGACATGCTTAAATCTCAGTCTACTAA AATTTATATTTGGTTAGTTAATTTTAAATTTACAAAAACAAAGATTGACC AGAGAATACAATGAGAATATTTGTACTTGAATTTCACACTGTCATAGATG TTCTGAAAATCACAGAAAGGGGGTAAGAGAATTTCTAGTAAGGAAAGGGG CGTTAACAACTTAACAAAGTTCTTTAAACCTATCCTTCTAAATTTCTAAT TTTGCAGTCTTGGACTGGTTTAAAATCCTAAAAATTCTTGCTCCCCTCGC TTGCAATCTATTTTAACCAATTCTCAGAAGAGATACCGTGCACAGACTCA AAAGCACCTCTTTTCAAGGGTGGATATGCTATCATTTTAGTTTTTGCATA AGGTCTTGAAAGTGGGGAAAAAATCTTGACCACACCCCAACCTTTAGAGG TATTCCATCAAATTTTGAAGTGGGGTAGAACCCCCCCCCTAGGGTTGCTC TAGTCTTGGGAGGGGGTATTGACCCCCTTCTGAACTATGACAGTGTGATA CGAAAGTACTCGAGAAAAACCTAAAAAAACACTTTGTGATAAGTACTTAT TAATTTAGTAGTATAGGATGGTCTCTTTTCTTCTGTAATAAGATGTCTAC CAATCAACCAATTTAATCCAAAACTTTCTTGAAATTCAAGTTAAACAACT AAGAACAAAACCTTAAAAGAAGTTTTTAAGAGGAGAAAAATATTGCAAAG TTTAATAAAGTTGCTTCTGACCACTGTCTGTTCTATGCAAATTTCAATTA GAGCCGCACTTAAATTATGTGAGAAATTTGTAAACAATACATTTTGATAG TTTGTTTTCAAAATTAAACTGTCCCAAGCTCTATGTGGAATCCAGGTTGA TACCCTTGGTAAGGTTCACATAGACATTTCTTTAATTGTTTCGTGCCAGG TCAAACCCTCTCTGTGTGCTTCAAATGCAAGTTTCGATAAAAGCTCGCGC TTAAACGTGTGAGCTTTTTGTAACCGCTCTTTGTTTTGACAGACGAGTGG GAAGTTTGCTCTTGAAATAATACTGATAGAGGGTTTTCAAAAATAGAACA GGGGTTGACGTTAAATTTAAATCCCTTTCCAGGGCTTTTCTGAGAATACC ACATTTACTGCTAATCATTAATACCTGGTTAAGACCCTATGTGTGTGTGT TTCATATGCAAATTTTGATAAAAGCTCGCACTTAATTGTGTGAGCTTTTT GTAACCACTCTTTGTTTTGACAGACGAGTGGGAAGTTTGCTTTTGAAATG ATACTGACAGGGGGTCTTCAAAAGTAGAACAGGGGTTGACGTTGAATTTA AATCCCTTTCCAGGGCTTTTTTTGAGAATACCACATTCCACATTTACTGC TAATTATTTAATGCCTGGTTAAAACCCTATANTTAAATTTAAATCCCTTT CCAGGGCTTTTTTGAGAATACCACATTTACTGCTAATCATTAATACCTGG TTAAGACCCTATGTGTGTGTGTTTCATATGCAAATTTCGATAAAAGCTTG CGCTTAATTGTGTGAGCTTTTTGTAACCACTCTTTGTTTTGACAGACGAG TGGGAAGTTTGCTCTTGAAATGATACTGACAGGGGGTCTTCAAATATAGA ACAGGGTTTGACGTTAAGTTTGAATTCCTTTCCAGGGCTTTTTTTGAGAA TATCATATTTACTGCTAATTATTCAATACCTGGTTAAAGACCCTTTGTGT GTGTGTTTCATATGCAAATTTCGATAAAAGCTCGCGCTTAATTGTGTGAG ATTTTTGTAACCACTCTTTGTTTTGACAGACGAGTGGGAAGTTTGCTCTT GAAATAATACTGACAGGGGGTCTTCAAAAATGGTAAAGGGGTTGTATAAA ATTTGGGTTCCTTTTTTTGAGGATACCACACTACTAAAAATTCTTTCTAA ATGTAATTCCAAAAGGAGCCAAAACATTTTCTCCTCTTCAAACTAAGATC TCATTTACAGCTTTCATTTTTAATACATAAATTTAAAAAAAATTGATTTC ATTTATTGGTATTGGTAGGACAGTACGAATTAATTTAAATTTATAAAAAA GCCCTTGCTTAAAATTTTGAATTCTTTTAACCGCTCTTTGATTAAGCAAA TGTTTTAAAGGAACCCTCCATAATAGTAATTGATGAGGATTTTTACTCTG AAAATTGTTTTAGACCTAGCGATGAAAATGAGAAAAGTATTTTTTTGGTT TTACACATCACATTTAAGGAATATTTGGCAAGCTTGCTAACCTTTTAAAG TAGTTAAAACTATTAAAAAAGTGCATTCTAAGGATTAACATTTTGTAAAA TCTTAGGAAAGGGACTCGAGAAATGTCCATTGAAGCCAAACAAAAAAAAA AAAAACGGACCAGCACGGGAAGGAAACGAAACAAGATAAGGGACGCGGCA CAGAAGGAAGAAGAACAACAAAATTTATATCACAGACTAGAAGAAGCAAC AAAAGAAAACCGAGCTTTTAAGGCCAAACAAATAAACCGTTCTTTTTTAT GAGTCGATCATCTAGGACTGTCATTAACAATAAAAATCGAAACGTTTTTA CTAGTCTAAAGCAACACATAACAGGAAAAATAATCAAATTCAACAAATCC AGTATAACTGTGAAAGAAAAAATTGGAAGTGGTGCATTTGGGTCTGTCTA TAGAACAATATTCCACCATATGAATATTCAAGTAGCTGTGAAAGAAAACG CAAGTATTGATCCTGCTGATTCTTCTCTTTGTGAAGCAAAAGTCATGTCT AAGCTTTGCTCGAACGATCACTTTCCGTTTTTATTTGGCATGGTTGAAAA CAAAATTGTGATGGAGCTTATCCAGGACGCAAACAACATGTCTTCCAAGT CCGTTCACGAGTTGTCAAAAGTTGGCTTCATTGAAAAATCGAGAGTTCTA GATTACGCTCGTCAAATTTTAAACGCAATAAACTTTTTACATGACCAACT TCTTTTACATAACGACATACACTCAAATAACGTATTAATTCGAGATGGAA AAATTGTAAAGATCATAGACTTCGGTAAAGTTACCCTGCAAGCTGCACCT ATTAAATATAATATCGTCCCTGGATCAGAACGACAAAAACTTTAGAACAA AAACCATAAGCACTTGGCGTACGAACTGCGTAACATTCCTCATTCAAAAC AATCTATCAAAACGGACATTTTTTCTATTGGACGCCTTTTTGAATCATAC TTTGTTACCTTCTTGAAAACACCCCTGTCTCAGTGCCCCGGTGGCATGAT TTCAGTACATGATTTTTTTCAGTACATGGTTTTAGTACATGATTTTTTCC TACGTCATTGCAGTAATCAAATTTTTATTGCACTCATTTGTGAATTGAGA TATAAATTGAATAAAGACAGCGACAATAAAAAACAGTTCTTGAATTCCCA AGCCATTTAGGATGATTACAAATGAGTGCAATAAAAATTTGATTACTGCA GTGACGTAGGAAAAGATCATGTACTGAAACCATGTACTGAAAAAAATCAT GTACTGAAACCACGCCACCGGGGCACTGAGACAGGGGTGTTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATATTTGGAC TAATTTTAACTCTCCTTTAGGATTTGATCCCAAATCTTTTCGATTGTGTA AACCATTAAACCTTGAAAATTATCTCTCCTTCCATAAGCGGTATTGCTTT ACTCATACTAGAAATAATTTTATTGTCTCAAAGGATCCTTTGCGAATTTT TTAAATGGGGGCATTAAAGTTATTAGAATAATTTTGGCTCAGAGACCCTT TACACCAATAACTAACTATGCTAAATATGCTAACCTAGCGTCTTTTTTTT TAATTTGGCCTTTCTTTCTGCTGCTCTACCTTCACTCCAAATATTGAACG ACTATCTATAAGGCTATCTAAGCCAAATTTACCCTACCCCTTCAAAGCTC AATAGAACAGAGAGTATCGGTATGGTAATTAAGATATCAGAAATATATAA GTACTAAAATGACTTTCGAGAATTTTCTCTATAACAACACCCCATTTTAG AGAGAATGCCTCATTAGTACATATGTTATAAAAAGTTTTTGGAAACATTT TGACCACCTTGGTCTTCTTAGGACAAATTTTATTTTCTTAGGAGCTTTTC TCAAAAATGCTGATTTTCGGAACATAAAATTTAATTTTTGTTGCACAGAT TGATACTATCAAATGGTAAAACCCATGTATACTTCTTGAAATAGGGTGAT ACAAAAATGCTATTNGGAGCTTTTCGCAACATAAAATTTAATTTTTGTTG CACAGATTGATACTATCAAATGGTAAAACCCATGTATACTTCTTGAAATA GGGTGATACAAAAATGCTATTCCTTTTCTTCGTTAATTGACACATTTTTT TGTTTTGTTTTTTGATTTGCATAGTTTTCAGCAACCCTTCGTGCTAAAAA AAAAACAGTTTGAAAACAGTTTGATTCAGATAATTCTAAAATTGTCACAA AATACTGTGAGCGAGAGATCGTTAAAAAGTAGTTTAACATATATATTTAT TTTCTCAATTTTATTTTTATTTTCTAAATCCATGGTTTCTAATATGTAAA AGCTATACATTATAATATTTTTAGCTAAATCTCGAAATAAATTTTACCAA AAAATTTAAATCAAAATGAATGAAGTCTTTTGTATCTCTAGATAATTTTG AAGTGAACATTGGTCAAAGTCTAAATTTTAATGATTAGCTGTTGTAACAA AATATTTCTTGTTTTAATAAGTTCTTTGCAGAAGCTTCTTTTTAAGTTAA AATATAGCCTTCACGTATCCCCTCTGATTTGTTTTGATATAGGGGATGCG TATTGTGTATAGAATTCTCGTCCAAGAGTTATCCCCGTTTTCTTGATTAG TAAGTTTCATATGAGAGATCTTTAAATTTCATGAAATTTAAATTAAAATT TTGAATGGCTAGTGGTTAATGCAATCATTGGATTTCTGAGCTTTTTAAGA AAATTGAAACAGGTTACCCCGAAATTGGGGTAATTCAGACGGGAATTTTA TACACGATACGCATCCCCTATATCAAAATCGATCCTGAGAATGCATGCAG CCTAAGCCTTTTCATGTGGCGTTAGTTGACCTGACCCTTAATTTGTTGTT GATCACTGTTTTAGAATGGTTAATAATCTGGAAGATCAGATGAAAGAGCG TTTAGAGGAAACAGATGGCAATTTAGGGCAAATCAAAAACGAGATTATGG GGGAGATAGGCAGTCTCAGGACTATATTGGAGAAGGCAGTCGACCAGTTT TCGATGTCAAGAAGCCGATCTGGTGGCAAAAAGTCCCTAGAATTGCTTGT AAGAAAAACATTTATCATTTCTCTCATTCAGCTTATCCATAATATTTGCT CAGAGTAGGACCGCACTAATAATAGGAATATTATAAAATGAGTTAATCGG AGGAATAATAAAGCACACAATCTCGTCATTTTCTATTTTTCATTTATTAA CAATGAATTCCCCAAGAAGAAGCAGCACAGGAAACAAATCACAAAATTTT TTTCCATAAGAATACACTTTATAAGAATGGGCATGATGAAAACGGCCAAA AAATTAAGAATAATCCTAAGAATTTCACCATTATGGAATTTTGCTACTCA AGCTAAGAATGCCATTTTAGAGCATTTCCATTTATAAATTGTCAATTACC CTCAAGTAAGACTCCTTTCACAAAAACTCCATTTTATGCTTGAGACGTAT GTACTAAATGTTAAATCTAGTATGAATTAGGATAGACTAAGAATGCTGTA AGAATATTTCAAGATGATTTTCCTAAGAAAGTTAAGAATATCCATGATGA AATGAATTTACACAATTCTTATAAAAAAAGCGTGTAGGTTAAAAAGTACC CGGAAATGAATAAATTAGATCTTGTCATAATAATTTATCCTACCAACTTA GAGGTGTGTTAAATTAGAGAATTGATGGAACGGCGTTCCAGGAACGCTTA AAGTATTCCAAAACTTATCCTACGGCAATTACAACAACTTTGAAGAATTT TTGCCACTAAATATACTTCTCAAACTGATTTTTTCTTCTTTCCTTTAGGA CAAGGTGAGGTCTCTTTACCGAGCTAACTTCAAAGATGGAGAAGGCTACG ATTTATCGAAAAGGTAAACGATTCTTCTACTATATAATTGTTTATTTTAT TTTATACTGGGCACCGTTTTTAATTCCGTTGTTATGGCTTATGACTGAAA AACCCATTTTCTTTTCCAAAAAATTTCTTCAATGTTGCTAGATCAAGTTT TGGGTTGGAAACAAAATTATAGAGAATGGTCTAAGGTGCCTAAATAATTT CTGGTTAAATAAACTTAGTTAAATTACATCCTTAACTGTTTTAAATTGTG TTGCGTTTTTTGGCCAAACAGGTACAATTATGATTCACGTCGAAGCAAAT ATTAATATTACAAGGTTTAAGTCAAGGTTTTCAGTCAAACTGACTGAAGG GCTAGATGCTAATGAATTGAATTGACTTTTAGATTTATTCATACCACCAA CCTTGAGATAGCTGCATCTATCACGCAAGCCATCCTCGAACAAGGAAAAT TTACAGACGAGCGAGAGATAAAAGGTATTATAGAAAATTAGTTCTTTCCA ACGGAAAGCTATCATGTAACTCTCAACCTATAGCGTTTCTTTCGATGGAA AGCACTTTTAAATTTTTCTAAAAATGTTTAGGAGACAGTAAAAGTATTTT ACTAGTTTATACGAAAACAAGCAAGCGATTTAAAATTGAATTCCATCTCC AGAACAAAAATTTAAATCAGATCTTCTTAAGAAATAAATAAAAGTGAAGT CCCTATAAAGAATGTCTCCAAGTTGTCTAAACCCTTCATTAACATAACCT TATAACACTACTAGTCTCCATAACTCTAACAAACCTGCGATTCGCTTACT TGCTCCTTTTATGGAAACTTCACTGTAACATCAATGGTTTTTTCATTAAT GTTCGGTATAAAATGCTATTTTGATGTTTTTTTCTTCAAAACTTAAGCTC AACAGAGTATTGATTACATTTACATTGTACTATGATTTTCAGTTAAAAAC AAAATTTATTTTTCAGCATGCTGTCGCAGATATTATGAAACGAAAAAGAA AGAAGAAAAGAAACTGCTAATGGATGATGATGAACGTGAAAAAATGGAAA CATACCAGCGTCGCTATTCAAGAAGAGACAGGGTGAGTTGCCTGACATTC AGTATTTTGTTGGTTACAAAGAAGCAGTCTTAAAATTTGATTTTTTACGC CCAAGGAGAGTTAAAAAGTCACTTTCTATTCAAACTTTTGCTTTTCATTG ATAGCTTTACAAAAGTCGCAACAAGCAAGTCAACGCATTAAAGGAGCAGA TCGGGCCAGATGTCTTTCACTTGTGGACGACGACAGCATGTCCCGAGCTG ATGAGCGACGAGGAGAGTGATGTGGATAACGAAGAGGTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053243TCONS_00053243Clytia hemisphaericatranscript
TCONS_00053242TCONS_00053242Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053242-proteinTCONS_00053242-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_227supercontigscaffold_227:475721..484311 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4 0.3 0.32 0 5.35 5.27 7.29 9.75 5.72 6.06 10.21 8.05 5.82 7.14 0.3 0.13 0.4 0.2 0.1 0 0.26 0 0.08 0.05 11.61 15.72 0 0.07 0.15 0.05