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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000318_pilon:249541..251445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021708.2 ID=XLOC_021708.2|Name=XLOC_021708.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1905bp|location=Sequence derived from alignment at sc0000318_pilon:249541..251445+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTCGACCtcaaaagtcaaattaaatcaattttttctcgTACTGG
CATGCTTCAGAAATTAAAGCACAGGTTTACTCGTACCTCTTCATCTCCAT
CAGACATTTATGACTTTTCTTTGTATAAATCTTATTCATCATTTTTGAAC
AATCCTTTCAATATTTCGTTTATGTGGAATACGGATGGTGTACCGCTGTT
CAAGTCTATTAAATCTTCCATTTGGCCTGTGTTTTATACCATTAATGAGT
TGCCCTTTCAAGATCgaaggaaaaaggaaaacattttaatCAGTGGCCTG
TGGTATGGGGAGACACATCCAAACATGTTACTGTTTTTGCCACCACAATT
TGAGACAATTAAAGAATTGGCATATTTTGGAACCAAAATTAATGATGAAG
TTACTCTAAAATCCATTTTGCTTTGTGGTACCCTTGATATGCCTGCCAAA
GCTAGTGCACTGAACTTTCAACAATTCAATTCGTTTTATGGTTGTCCAAA
ATGCCTGCAGTCTGGAGAAACAGTGAAGACAAATAAGAATGGGAATGTTA
GAGCTTTTCCTTTTGATGAATCGAATCCAACTGGTCCACATAGAACACAT
GCAGGTACTATAAAGCATGCTATTGAATCAGCCAACTCTGACAGTTTAGT
TCATGTTAAAGGGGTTAAAGGACCTTCTCCGTTAATACTTTTACCAGAAC
ATGATATTATCCGTGGAATGGGAATTGACTATATGCATGCTGTTCTTTTA
GGAGTTACCAAACTAATAATGTCTTTATGGTTTGATGGCTCTCATAAAAG
TGAATCTTATTCTGTATATCAAAGTCTACCTTCTATTGAAAACCGTTTGG
TATCACTGAAACCACCAAATTATATATCACGTGCACCCCGAACAATAAAA
AGTAATCTTGGCTACTGGAAAGCCTCAGAGTTTCGTTCATTTTTATTATA
CTACTTTGTTCCCGTCATGTCAAACCTTTTACCCTCCATCTATTTTGAAC
ACTTTTATTTGCTTGCCCATGCAGTGCATTTATTactgaaatcaaaaatt
acCCCAGATGATATTGTTACTGCgagaagatttatttttttgttttgctc
cACTTTTGACAAGCTATATCCACGTCGCTACATGACCATCAATATTCATT
CCTTGAATCACCTACCTCAAACAGTGTTGGAACTTGGACCTCTTTATGTA
TACAGTTTGTTTAGTTTTGAGGATAAGAATGGTTATATTTTAAAACTGAT
TCATGGCACACAGAATATTCCATTTCAACTAGCATGTGCAGTTTCAGCAT
CTAATCATCTTCCATATCTAGAAGAAACCTGTATTGAACCTGGCACAAAG
GAGGATAAGTATATCAAGCAGCTGAAAGGAACTTATCATAAACATACTTT
TAAAATCAATCTAAATCTGACCGGTATTGGCGCCTTTTTACCATATGCTG
tttcaaaagaagaaagttCCCTGTTTACCGATCGCTTTATGACAATTTAT
TCTTCTACTTATACATTTCCATCTATTAAGCTTGGTGGCTTCATCATTAG
ATCAAGCTGTCGCACCAAGGAGACGCGTAGAAATAGCATATCTGTCTCCC
TAACCACAggtcattatttctcaattaaTCGCTTCGCTTGTTTCAAGACA
GATGATGGAAACGATTTTTATGTTGCTTTTGGTAATTATTTCGATGTTCa
gccttttcaaatatttcagccATCAAGTAgcttcttaaaatgttttaagc
CTGGAGAAAGCAAACCATTGGTAAAGCGAGTCCaacttcaaaataaatta
aGTATAATCAGTATTACCGAAATCTCAGAGCAATGTTTATGTTTGGATAT
TGATGGTGGATATTCTTATGTTACAAATTTTCCTAACATTTTAGAGTCAG
ATTAA Coding sequence (CDS) from alignment at sc0000318_pilon:249541..251445+ >XLOC_021708.2 ID=XLOC_021708.2|Name=XLOC_021708.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3810bp|location=Sequence derived from alignment at sc0000318_pilon:249541..251445+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTCGACCtcaaaagtcaaattaaatcaattttttctcgTACTGG
CATGCTTCAGAAATTAAAGCACAGGTTTACTCGTACCTCTTCATCTCCAT
CAGACATTTATGACTTTTCTTTGTATAAATCTTATTCATCATTTTTGAAC
AATCCTTTCAATATTTCGTTTATGTGGAATACGGATGGTGTACCGCTGTT
CAAGTCTATTAAATCTTCCATTTGGCCTGTGTTTTATACCATTAATGAGT
TGCCCTTTCAAGATCgaaggaaaaaggaaaacattttaatCAGTGGCCTG
TGGTATGGGGAGACACATCCAAACATGTTACTGTTTTTGCCACCACAATT
TGAGACAATTAAAGAATTGGCATATTTTGGAACCAAAATTAATGATGAAG
TTACTCTAAAATCCATTTTGCTTTGTGGTACCCTTGATATGCCTGCCAAA
GCTAGTGCACTGAACTTTCAACAATTCAATTCGTTTTATGGTTGTCCAAA
ATGCCTGCAGTCTGGAGAAACAGTGAAGACAAATAAGAATGGGAATGTTA
GAGCTTTTCCTTTTGATGAATCGAATCCAACTGGTCCACATAGAACACAT
GCAGGTACTATAAAGCATGCTATTGAATCAGCCAACTCTGACAGTTTAGT
TCATGTTAAAGGGGTTAAAGGACCTTCTCCGTTAATACTTTTACCAGAAC
ATGATATTATCCGTGGAATGGGAATTGACTATATGCATGCTGTTCTTTTA
GGAGTTACCAAACTAATAATGTCTTTATGGTTTGATGGCTCTCATAAAAG
TGAATCTTATTCTGTATATCAAAGTCTACCTTCTATTGAAAACCGTTTGG
TATCACTGAAACCACCAAATTATATATCACGTGCACCCCGAACAATAAAA
AGTAATCTTGGCTACTGGAAAGCCTCAGAGTTTCGTTCATTTTTATTATA
CTACTTTGTTCCCGTCATGTCAAACCTTTTACCCTCCATCTATTTTGAAC
ACTTTTATTTGCTTGCCCATGCAGTGCATTTATTactgaaatcaaaaatt
acCCCAGATGATATTGTTACTGCgagaagatttatttttttgttttgctc
cACTTTTGACAAGCTATATCCACGTCGCTACATGACCATCAATATTCATT
CCTTGAATCACCTACCTCAAACAGTGTTGGAACTTGGACCTCTTTATGTA
TACAGTTTGTTTAGTTTTGAGGATAAGAATGGTTATATTTTAAAACTGAT
TCATGGCACACAGAATATTCCATTTCAACTAGCATGTGCAGTTTCAGCAT
CTAATCATCTTCCATATCTAGAAGAAACCTGTATTGAACCTGGCACAAAG
GAGGATAAGTATATCAAGCAGCTGAAAGGAACTTATCATAAACATACTTT
TAAAATCAATCTAAATCTGACCGGTATTGGCGCCTTTTTACCATATGCTG
tttcaaaagaagaaagttCCCTGTTTACCGATCGCTTTATGACAATTTAT
TCTTCTACTTATACATTTCCATCTATTAAGCTTGGTGGCTTCATCATTAG
ATCAAGCTGTCGCACCAAGGAGACGCGTAGAAATAGCATATCTGTCTCCC
TAACCACAggtcattatttctcaattaaTCGCTTCGCTTGTTTCAAGACA
GATGATGGAAACGATTTTTATGTTGCTTTTGGTAATTATTTCGATGTTCa
gccttttcaaatatttcagccATCAAGTAgcttcttaaaatgttttaagc
CTGGAGAAAGCAAACCATTGGTAAAGCGAGTCCaacttcaaaataaatta
aGTATAATCAGTATTACCGAAATCTCAGAGCAATGTTTATGTTTGGATAT
TGATGGTGGATATTCTTATGTTACAAATTTTCCTAACATTTTAGAGTCAG
ATTAAATGGAGTTCGACCtcaaaagtcaaattaaatcaattttttctcgT
ACTGGCATGCTTCAGAAATTAAAGCACAGGTTTACTCGTACCTCTTCATC
TCCATCAGACATTTATGACTTTTCTTTGTATAAATCTTATTCATCATTTT
TGAACAATCCTTTCAATATTTCGTTTATGTGGAATACGGATGGTGTACCG
CTGTTCAAGTCTATTAAATCTTCCATTTGGCCTGTGTTTTATACCATTAA
TGAGTTGCCCTTTCAAGATCgaaggaaaaaggaaaacattttaatCAGTG
GCCTGTGGTATGGGGAGACACATCCAAACATGTTACTGTTTTTGCCACCA
CAATTTGAGACAATTAAAGAATTGGCATATTTTGGAACCAAAATTAATGA
TGAAGTTACTCTAAAATCCATTTTGCTTTGTGGTACCCTTGATATGCCTG
CCAAAGCTAGTGCACTGAACTTTCAACAATTCAATTCGTTTTATGGTTGT
CCAAAATGCCTGCAGTCTGGAGAAACAGTGAAGACAAATAAGAATGGGAA
TGTTAGAGCTTTTCCTTTTGATGAATCGAATCCAACTGGTCCACATAGAA
CACATGCAGGTACTATAAAGCATGCTATTGAATCAGCCAACTCTGACAGT
TTAGTTCATGTTAAAGGGGTTAAAGGACCTTCTCCGTTAATACTTTTACC
AGAACATGATATTATCCGTGGAATGGGAATTGACTATATGCATGCTGTTC
TTTTAGGAGTTACCAAACTAATAATGTCTTTATGGTTTGATGGCTCTCAT
AAAAGTGAATCTTATTCTGTATATCAAAGTCTACCTTCTATTGAAAACCG
TTTGGTATCACTGAAACCACCAAATTATATATCACGTGCACCCCGAACAA
TAAAAAGTAATCTTGGCTACTGGAAAGCCTCAGAGTTTCGTTCATTTTTA
TTATACTACTTTGTTCCCGTCATGTCAAACCTTTTACCCTCCATCTATTT
TGAACACTTTTATTTGCTTGCCCATGCAGTGCATTTATTactgaaatcaa
aaattacCCCAGATGATATTGTTACTGCgagaagatttatttttttgttt
tgctccACTTTTGACAAGCTATATCCACGTCGCTACATGACCATCAATAT
TCATTCCTTGAATCACCTACCTCAAACAGTGTTGGAACTTGGACCTCTTT
ATGTATACAGTTTGTTTAGTTTTGAGGATAAGAATGGTTATATTTTAAAA
CTGATTCATGGCACACAGAATATTCCATTTCAACTAGCATGTGCAGTTTC
AGCATCTAATCATCTTCCATATCTAGAAGAAACCTGTATTGAACCTGGCA
CAAAGGAGGATAAGTATATCAAGCAGCTGAAAGGAACTTATCATAAACAT
ACTTTTAAAATCAATCTAAATCTGACCGGTATTGGCGCCTTTTTACCATA
TGCTGtttcaaaagaagaaagttCCCTGTTTACCGATCGCTTTATGACAA
TTTATTCTTCTACTTATACATTTCCATCTATTAAGCTTGGTGGCTTCATC
ATTAGATCAAGCTGTCGCACCAAGGAGACGCGTAGAAATAGCATATCTGT
CTCCCTAACCACAggtcattatttctcaattaaTCGCTTCGCTTGTTTCA
AGACAGATGATGGAAACGATTTTTATGTTGCTTTTGGTAATTATTTCGAT
GTTCagccttttcaaatatttcagccATCAAGTAgcttcttaaaatgttt
taagcCTGGAGAAAGCAAACCATTGGTAAAGCGAGTCCaacttcaaaata
aattaaGTATAATCAGTATTACCGAAATCTCAGAGCAATGTTTATGTTTG
GATATTGATGGTGGATATTCTTATGTTACAAATTTTCCTAACATTTTAGA
GTCAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000318_pilon | genome | sc0000318_pilon:249541..251445 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1905:1 |
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