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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000253_pilon:425606..430861+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031826 ID=XLOC_031826|Name=XLOC_031826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5256bp|location=Sequence derived from alignment at sc0000253_pilon:425606..430861+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAGGTtacaagttttgatttttgtgcttTCTCAATTTGCTCTTAC
CCTTGCAATCGAACCTTCATCTTTTATACCAACAAGTTATGAAGCTCTCG
GAAAGAAGGTGGTCTTGAAAACATACCAAGATGGTTCATACATCAACTGC
GCGCAAAGATGTAAACGTCTGTTGAAATGCACCGACATCGCGCATCTAAA
GATTGCGGATAATGAAGGTCAGTGTATTTTACTGACCAACATCGAGAGAG
CAAAATGTCAGCAAACGAAGGATGGAAGTTACATTTTGATGGGTGATTAT
TCCGGTCCGTATAATACACGTCGTTTGTGTCGCACGGAGGAAAATATCGA
AACCAAACTGACAATCAAAGAGCCTGTTTTGTTTGACGAGAAAGATCACA
GTAAAAGAGgagaaaagtttgtttacatggTCAAGAAACCTCAATTTggt
aagtttcattttttatccattcttAAATGTCCGATTTGTATATTCATTTT
TAGCATATTGGACTGTTCCAGAAAAGatttgaatatgggggatgaaggat
ataaacattttttagaaatttacctcgaacattgtgaattttgaccccct
ggacattcaaaacccccatgtacggacattctctggaagagcccattggc
TTAATTTTGAGAGCTGAAACTTTCTCGAATTTCGAAAGAAACATATTTCT
CGTGTGCTGTCCTGTAATTTTCGAAAGcgttttcatatttctttaaagTC
CCTCATTGGAGAGGATTGATAGTCGGTATTTGATGTGCTGCATCCCTAGT
CGACTCAACTACCATTCTGCGTAAATAGACCTGTTAATATTTCGGTTGAG
AAAACTGGGTGGGGCTCGGCCTCCTACTGCAAAAATCTTAGGTGGATgga
aatttctgcatctgggtaCATGCCAGAAATTTGCTCTTCGTAGTAGAGCC
TGATTTAAATGATATGACTtttgttttaaacattttagTACATAATATCC
ACTATAACACCCGAGCAATTACCTCCCCGTGTTTTGAATCTCTAAAACCC
AAAACAGACAGCGAATCATCACgctcaaaagtttttttgtccgctttttt
acaaaaatagtgTTTATTCCGTTTTATCATAGATATTAATCAACATGTTT
AGAATCCATGGCAAACTCAATTTAATTTGTATTGTAGTACTAAGCACCTC
TTTTACTTGCTCACTTCTATTGTACGTCCAAATCAGTAATATGACAATTT
TGTGAAAGTCTTAAAGCATTACTGGGTAATGctaaaaaatgctctaaaat
agCAATCATAGATTCAATATTCCatcagcggaaaagctttcaaaataaaa
ttcatcatttttatcTACGGCTATTAGAATTCAAGAGTTGCGAAGAAGCG
TACAACCAAGGTGAACGAACAAGTGGTTTGTACTACCTCACTGATGCATA
CTCAGACAATGATTTAAGATGGCATTATTGCAACATGGACATGTTGGGAG
CGTGTGGTTCTGGAGGATGGACATTAGCCATGCTTGCAGATGGAACTCAG
GTAagaatttttaaactttcataaaaaaggGTTATTGAATGGCACGGTTT
GGTTCATTTGATATGAGGAAATTTTGACCGATTTTTGACGTTTAATTCCT
TATCAATGTGACTGTTGAGTGAAGAGTAGCATAAACCTAGCCTAGTGAGG
AATCCAAAAAATACGTTTTTGATGATGGTCGAAGTACCCAGAAATAGTGA
TAAGATACCCTAAACATAAACAAGGGGAAACAATGAAAAGGAGACAAATG
TATAATTGTTAAATGAGATCTCTTGACTATAAAATGAAACGTAAGAAAGT
GTGTTGGGTTTGGCGTGACATTTGGGATGCATCGAGAGATAAATCTACTT
AAAGCCTATAGCCGCGGACGGTTGTGAAGACCGCAACGAGAGCTGGAGCC
GTGACGTGGATCTGAGCCTATCTGATCTGATGTAATAGAACTAGATGGGG
TTTACGTGTAACCTGCAcccccccccTTAAGCTGTAAATACTACAAGGTT
CTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAGCTGTAAG
TACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTAACCCT
TAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAA
GTTCTATCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAACTGT
AAGTACTAAAAAGTTCTAGCCCTTAAACTGTAAGTTACTAAAAAGTTCTA
TCCCTTAAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTAC
TAAAAAGTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTA
AACTGTAAGTACTAAAAAGTTCTATCCCTTAAACTGTAAGTACTAAAAAG
TTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTATCCCTTAAACTGTAA
GTACTAAAAAGTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCC
CTTAAACTGTAAGTACTAAAAAGTTCTATCCCTTAAACTGTAAGTACTAA
AAAGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAACT
GTAAGTACTAAAAAGGTCTATAGCCCCTTAAACTGTAAGTACTAAAAAGT
TCTATCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAG
TACTAAAAAGTTCTAGCCCTTAAACTGTAAATATTAAAAAGTTCTAGCCC
TTAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAA
AGTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAACTG
TAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTAA
CCCTAAATTGTAAGTACTAAAAAGTTCTAGCCTAGAAGTAAAAAACTTAA
GCCTTACAACAAGAGCCGGAGCCGTGATGTTGTTTAACCCCAAAGAGTGC
AACGAGAGCCGGAGCCTCCACGTTGTTCTAAGAGGAgtaatcaaagaaaa
aagataaaaaaaataaaaatagaaacctTAGCCTATAACGAGAGCCGGAG
CCTCCCGTGTGACGTTGTTGAAAggagtaaaagaaaaaaagaacaaaagc
cTATAACGAGAGCCGGAGCCATGACATTGTTATTAGGGTAACGGAGCGAT
GAGaaaagaggtaaaaaaaaggaaggaaaaaaggaaaacgacccaaaaaa
gaaaacaataaaagaaaaacaaaacgagCAACCTAACAAACACGTATTGA
TCGAGCTCAAGATGCATCCCAAACGACCTAATCCCTGGGCTAAAAAACCT
GTAGCGTGGAAAAACTAGGAAAAACCGCTGGGACTAGGATTGATCGAAAT
GACTTGGCGCGCGCTTCTTCTTCCCGCCGTCGGTGATGGTTGATCTGATG
ATTTTCTCTTCTATTTttccatggaggtaataagaaatagatggagaata
aaTGACTCGGTGATGGCCTAGTAAGTTATCGttaatttcttttatatttt
cattcaaatcggttttctttgatttactatcattggaagcaaaaaaatcc
gaaatgtaaatttataagaacagaattgagaatgttatcctgattgaaat
aaacattttatgcaaaaagttcttgttcaaacgcgatacaaaaataattt
tctcgtagtaaggttacaatagttctatgatttcatatcgaTGTAATATT
GGGCAAACATattgctaattttgagagtttcagcacattttccttgaaaa
tttcttcattagaaatctttacgtctaaaagggagggggctttcaaattc
tgatggatgattaatttaaaggttacctaatcgtaatatagatttttttt
aaaatctatcgatgattttatgagaAGGGCCCTTaaaaatataggatttt
gtgcttgttccggcaagctttttctcattttgatcaacaaagctattatc
tcacaatagagctgttaaaaatccaacacctttttattcagttttttatg
aacttaaatattcccatgagtgcacacaaaattaatcactttttcccatt
gcaaccaaggagccgtttgcttccaatgattaggtacaatgaaataaaag
tcatttattctccatctatttcttattacctccatggaaaaatagaagag
aaaaaaaaacagcgaaAGGAAATAAGTACAAGTAAAAGGATCATAGGAAT
AAATAAGGGTGTCAGGGAGGGTGGGAGGCAAAAATATTTGTGTTGACTGA
ATGAGGGGATGAAGTGAACTGAATGACCGAACTCAAACGCTACAAGTCGG
AGTCCGTGGGACTGGGACTGGGACGAGTGGGAGTGGGCGTGCAGTTTTAA
CACGCCATATGATGCCGGGCGTTTGATTTGCTGATTGCAGAATTAACATG
AGCTAAAATTTAGCTCTAAATATACACACCCCTCAAAGTGGCTAACGAAC
AAACGCATTAAGTCTAAAGATCGAAATTGCAAAGTAATTATAGGAATCAA
GAGCGAAACAGCTTTGAAAGCAGTCTAAATATAATGTTCTTTTAAATCCA
TTAAATGCAGCACGCCACGGTGTAGGTTTACTCTATTTATGTTCTTCTTG
GTGTAATTTTTAGAAAGAATTCAAGTACGATGAGATCTATCTATGGGAGT
ATGATACTCTTCTGAATGAAACTGAAGGTTTGAAGGATCCGCTGACCATC
TCTGCCAAATACGAAGCCTTTAATCTTCTACCATTCAAATCGATCTGCAT
TGGAATGAAGACTAAAGGGGAGGAGACAGGCTATGTTCGGCTACCGGTAG
CTTATTCATCGCTCAGTTACTTTTTCTTCGTGTTTAATTACACGGTACCG
TATCAAACAGACGTCCCTCTTGATGAATGGAGCGAGTTGATCAAAATGCC
TGAAATGACGGATAAATGTCCATCCAGACAAGGCTTCAATTTCCTGCAGC
GCTGGGGAACTTTTCGAATCGGGATTGCAACCAACGAGAATGATTGCACT
GTGAACTTCAGCTCGACCATGGTTGCAATCGGAATCCGAAAACCAATGTG
GTGCCACAAGCTGGTTGAAGATTATTCTGGTGGATATGAATTTTGTTCAC
CTGTCAATGGAAAAAATTATCTCAAACCAGCTCTTACTTACatttacttg
aaataa Coding sequence (CDS) from alignment at sc0000253_pilon:425606..430861+ >XLOC_031826 ID=XLOC_031826|Name=XLOC_031826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2328bp|location=Sequence derived from alignment at sc0000253_pilon:425606..430861+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAGGTtacaagttttgatttttgtgcttTCTCAATTTGCTCTTAC
CCTTGCAATCGAACCTTCATCTTTTATACCAACAAGTTATGAAGCTCTCG
GAAAGAAGGTGGTCTTGAAAACATACCAAGATGGTTCATACATCAACTGC
GCGCAAAGATGTAAACGTCTGTTGAAATGCACCGACATCGCGCATCTAAA
GATTGCGGATAATGAAGGTCAGTGTATTTTACTGACCAACATCGAGAGAG
CAAAATGTCAGCAAACGAAGGATGGAAGTTACATTTTGATGGGTGATTAT
TCCGGTCCGTATAATACACGTCGTTTGTGTCGCACGGAGGAAAATATCGA
AACCAAACTGACAATCAAAGAGCCTGTTTTGTTTGACGAGAAAGATCACA
GTAAAAGAGgagaaaagtttgtttacatggTCAAGAAACCTCAATTTgAT
GGAGAGGTtacaagttttgatttttgtgcttTCTCAATTTGCTCTTACCC
TTGCAATCGAACCTTCATCTTTTATACCAACAAGTTATGAAGCTCTCGGA
AAGAAGGTGGTCTTGAAAACATACCAAGATGGTTCATACATCAACTGCGC
GCAAAGATGTAAACGTCTGTTGAAATGCACCGACATCGCGCATCTAAAGA
TTGCGGATAATGAAGGTCAGTGTATTTTACTGACCAACATCGAGAGAGCA
AAATGTCAGCAAACGAAGGATGGAAGTTACATTTTGATGGGTGATTATTC
CGGTCCGTATAATACACGTCGTTTGTGTCGCACGGAGGAAAATATCGAAA
CCAAACTGACAATCAAAGAGCCTGTTTTGTTTGACGAGAAAGATCACAGT
AAAAGAGgagaaaagtttgtttacatggTCAAGAAACCTCAATTTgAATT
CAAGAGTTGCGAAGAAGCGTACAACCAAGGTGAACGAACAAGTGGTTTGT
ACTACCTCACTGATGCATACTCAGACAATGATTTAAGATGGCATTATTGC
AACATGGACATGTTGGGAGCGTGTGGTTCTGGAGGATGGACATTAGCCAT
GCTTGCAGATGGAACTCAGAATTCAAGAGTTGCGAAGAAGCGTACAACCA
AGGTGAACGAACAAGTGGTTTGTACTACCTCACTGATGCATACTCAGACA
ATGATTTAAGATGGCATTATTGCAACATGGACATGTTGGGAGCGTGTGGT
TCTGGAGGATGGACATTAGCCATGCTTGCAGATGGAACTCAGAAAGAATT
CAAGTACGATGAGATCTATCTATGGGAGTATGATACTCTTCTGAATGAAA
CTGAAGGTTTGAAGGATCCGCTGACCATCTCTGCCAAATACGAAGCCTTT
AATCTTCTACCATTCAAATCGATCTGCATTGGAATGAAGACTAAAGGGGA
GGAGACAGGCTATGTTCGGCTACCGGTAGCTTATTCATCGCTCAGTTACT
TTTTCTTCGTGTTTAATTACACGGTACCGTATCAAACAGACGTCCCTCTT
GATGAATGGAGCGAGTTGATCAAAATGCCTGAAATGACGGATAAATGTCC
ATCCAGACAAGGCTTCAATTTCCTGCAGCGCTGGGGAACTTTTCGAATCG
GGATTGCAACCAACGAGAATGATTGCACTGTGAACTTCAGCTCGACCATG
GTTGCAATCGGAATCCGAAAACCAATGTGGTGCCACAAGCTGGTTGAAGA
TTATTCTGGTGGATATGAATTTTGTTCACCTGTCAATGGAAAAAATTATC
TCAAACCAGCTCTTACTTACatttacttgaaataaAAAGAATTCAAGTAC
GATGAGATCTATCTATGGGAGTATGATACTCTTCTGAATGAAACTGAAGG
TTTGAAGGATCCGCTGACCATCTCTGCCAAATACGAAGCCTTTAATCTTC
TACCATTCAAATCGATCTGCATTGGAATGAAGACTAAAGGGGAGGAGACA
GGCTATGTTCGGCTACCGGTAGCTTATTCATCGCTCAGTTACTTTTTCTT
CGTGTTTAATTACACGGTACCGTATCAAACAGACGTCCCTCTTGATGAAT
GGAGCGAGTTGATCAAAATGCCTGAAATGACGGATAAATGTCCATCCAGA
CAAGGCTTCAATTTCCTGCAGCGCTGGGGAACTTTTCGAATCGGGATTGC
AACCAACGAGAATGATTGCACTGTGAACTTCAGCTCGACCATGGTTGCAA
TCGGAATCCGAAAACCAATGTGGTGCCACAAGCTGGTTGAAGATTATTCT
GGTGGATATGAATTTTGTTCACCTGTCAATGGAAAAAATTATCTCAAACC
AGCTCTTACTTACatttacttgaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253_pilon | genome | sc0000253_pilon:425606..430861 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 622-1164:4714 |
| Aaloc | 451-621:1380 |
| Aaloc | 1-447:1 |
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