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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:301523..305556+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033663 ID=XLOC_033663|Name=XLOC_033663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4034bp|location=Sequence derived from alignment at sc0000256_pilon:301523..305556+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAACTACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTTCTGT
CTTTAATTTTCTAAGATATCTGGAAGTGGACTCTCGATTTAACAGATTGG
AGTTAGAAAATTGGAGTAAGGGTATGTCAGTTCACATCGTTTTTCTCTGC
GTTTGATAGATCTTTAGATAGACTtgttaaatgtttaaaaatatttttaa
ttgacTAAATTTAGAACTTCTGTTTCACAAACCCGCTGGGacccccaggg
ggggggggtacttaggcaaatggagggtacggtatgtgccacccttcttt
tttagatttcaaaagtccagctaagggtcggaaaaatcagaaaatcaaat
ttcagtcccactaagggtcggagaaataggaaaatttcaactttttaccc
ccggaaagatcgaatttggttaaaaataggtcaaattagtcccaataaga
gtcgtaaaattcacaaaattttcctttcttttcttctttttagtcccggt
aagggtccaaaggttGAAAGTCGGGCAGCACCCCCCGTCAGTtcgcaatc
ctagtacccccagGCTGGGACCCCATCCAGCATGACTTTGTTTGTATCCC
CATCAAACCCATCATCTCAAAAATTTGCACTCCAAAAACAATAAAgtata
agcccaaagggctagaagcgaatcggatttgaagccactgaatcCTACCT
AAGTTACACGGCCTTccggattgaaaataaaattttacactagattaaaa
aaaaaacactcgaaaacaaagaaactgctaaattcaatccgtcgtcaaaa
aatACGGCGTACATTCtgaggcttcactttttcttgcctgagaaaggttg
aagattcgcATCTAGCCCTTTGAGATTATACTTCATTACTCCAAAATTAT
CCCGCTGGATTTTTCGACCTGAGAATAATAGAACTTCTATACCCTTTAGA
ATTAtgataaaagattttcattcCCACTAGTGGGAAAATTTCAACCGGGG
CTACGAGACAAGGGTGTAAAACAGTAGGTCTCCTTTACAGAGCACGAAAC
GGGAACGCAAATTTCATTTATGCATTAATGAAATAGATGATGAATTTGTG
GTCCACTCGTGGTCCACTTAGCTTTTTTGGTCGAATACTCTAAAAAGCAT
TGAatagtcttttttaatttttaaatctcTCCTTTTGTAGATGTGGTAAA
AGACAGATCTCGACGTGATGCTCCAAAGATGCTGGATGAAAATGTACAAA
ACATTTTATCAAGTATTGAAACCTTAACTGATTTCGTTCAAAAGCAATCG
AATGAAACATTCAATGGAGAAATCAATCAAGCTTTGGAAAAATTCTTCAT
GCAATTCCCTACGAAAAACATTTGTAAACAATTCGTAACCCAGTGTGGCT
GTAAAGGTATTATTGAGTTGTTAGTAATTTAAATTCTGAGGATAGAAATA
TTATATTTAATTCAACTAAccggtttgaaatattttcagtgaaaaatcTA
AATCTCTGAGTTCGTCTGTGCATatccagggatatgttataatAGCGGAG
CGTATTTCCCTATTAGGCATCTCACTTTACATACATAACAAGCATTGGTT
TTGTTTACGCCCAAACAAGAAAGCAATTGTGATATcataaatttcaatat
tttattttagaaaaatgcaccACTATTGACAAGGATTCCAGCGATGTAAA
ATCAACAGCTAAATTCATTCGTGGACCACCGGTaggtaaaatatattttc
caatttcTGTCAGTAAACAATTCTCATGCACTCTTGGAAAAGGAGCTTTT
GACTCAGACTTAGAGTAATGACTTATTTATTTCGGTTTCAGGGTCCTCCA
GGACCAAGAGGATTAAGCCTAGAACCACCACGATTGATCAAAAGCTCACT
TGATGACCGAATTGTTAATCTAACTGATTCAACAACATTCGAATGTTCTT
TTTCTGGAAACCCATTGCCTgaaatttcttggaaaagttCAGCTAAAAAC
GCTAAAACCATCACTTGGAAGAATAAAGAAAACCTTGAAGTTTCAAGTCG
AATGATCATCTCAAATATTTCATGGAGCGATCAAGGACCGATCGAATGCC
GTGCGAAGAGCTTGCTCGGAGAAGTTAGTGTTTCAGGAAATCTTCACACA
TTGTGTAAGAATTTATCGAAGtcatttttattctaaaaatttttgttcCC
TCTTTCCAACTGGTAAAATAATCTCCTGACCTGACTCTCAACTAACATAG
GGTTCGCTTTTTGCATGTTCTTAACAGTCGTGTCATTATTCTTCTTTGTA
GCTCACCCAGTCATAAATACCACAAAAGCATTGGTTTTTGCACCACAAGG
AGTTGATTTCCACTTCCCTTTGTGTCAAGTACGATCCAATCCACCTGCCA
AAATTACATGGAAAAGAATATTCTGGTCATTACCAGCCGGTCGCTTTCAT
ATCCGAGAAAaagagttgcttataaaagatgtaCGATATTCAGATGAAGG
GTTCTATGTCTGTGAAGCTGAAAACATGCTTGGTAAGAACGTTGCTTTAT
TCCTCAAAACTATATAAAATGTAGAACTTCAGTACACCTCTGTGTCAAAC
ACCCGTTGGGACCCCCGCGAATAAAAAattcggctgaaattttgccCCAG
TTGGAAATTTACCCCACAATTTCAGTCCCGTTGGAAAattaactttgttt
ttattcccatttgaaattcaataggAAAAACCCACTATGGGGGAAGTTCC
ATTGCTGGGGCTGCAAGACAGAGTTGTTTTAATGTCACTGGGTCTTTAAA
TATGTAGATGTGCTTTATGGCTCTAAGTGACTCCAACTCTTGCCGCAACA
ACAAGTCATTGTTTTAAAATGTCGCAGGGTGTATTGAATGTTTGATCTCT
GACTTCTGTTTGTCTGTTTCCTTTCAAAGGTAAAGCTCAAATGACAGTCC
AATTGAAAATACGTTCGTTGGAATTGCAATCGTCCTCACCTTCATTCATC
CAAACTACAAAAAATGTTACATCCATCGAATGTTCAGcatacggaaacac
ccgaatAATGACCGGGACTATCACGAGATCCGGAATGCCAATCCCTTCCG
TGAGCGAATCTATAAAGGCCAATTTATTAAATGTGAAAGCTGTAGTATCT
GAGAATGGAACATATCTTTGTACTGTCCGAAGTGGAAGTGAAAAGGTTAA
CAGTGCAACTGTGGTTAAGATTTTACGTAACTTCTTATTtggttttattt
catttctatATGTTCCCATTACACTCGTTTATgcaaagaaatttcatttt
taatttcatgCCTTACGGGTCACTCTTTTGAAAtgatgcattatgtttta
tttaCGTCATCTGGAAAAGATTCTACCTTAAAATGTGTACGAACCCTTAg
agggggtttcagggggtatcCGATTCCACAATTCCGCACTTCTGcaaaat
tttttgctaaattctgtttttctgcactaaaattgtctaattttccgtct
ccgtcggagaacccaatttccgtaattccgtctaaattttcgccaaattc
cgccactccgtccgaacaAAGGGctgattccgctcctccgccaaccatga
aacccccctaCATAGGAGAAGCCTTATCTAGAAGAGGGgattattgaaaa
tataaagCCAGGGCATTGGAGGAGGGAAGGTGGCCCCAAGCCTTGCGTAG
AATCTATAAAAATATCAGCTATCTTACAACTATTTCAGCTCCCGAGAAAA
CAGAAAAGACAAATCTGAACCCAGAAACCTCCTTACCCTCGATCATAGCT
CTAGCTGGTGACGTTGTCAATATCAGTTGTTTTGCATACGGGAATACTCA
ATATATGAACGGGACGATCACAAATGCGGATGTACCGGTACAGAATGTTA
CCATCATAACGAAAGATGATTTATTTTTGGTGAAGGCACTGGTGGTTGAT
GACGGAACTTTTGTTTGTACCATCCGGAATGAGACAGATGATAAAGTTAT
TGTTGAGAATATTTCACGCGTCATATTCTTGCCT Coding sequence (CDS) from alignment at sc0000256_pilon:301523..305556+ >XLOC_033663 ID=XLOC_033663|Name=XLOC_033663|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3090bp|location=Sequence derived from alignment at sc0000256_pilon:301523..305556+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAACTACCTTGGTTATTAGTTCTCTGTTTTGGCTGTCTTTCTGT
CTTTAATTTTCTAAGATATCTGGAAGTGGACTCTCGATTTAACAGATTGG
AGTTAGAAAATTGGAGTAAGGATGGAGAAACTACCTTGGTTATTAGTTCT
CTGTTTTGGCTGTCTTTCTGTCTTTAATTTTCTAAGATATCTGGAAGTGG
ACTCTCGATTTAACAGATTGGAGTTAGAAAATTGGAGTAAGGATGTGGTA
AAAGACAGATCTCGACGTGATGCTCCAAAGATGCTGGATGAAAATGTACA
AAACATTTTATCAAGTATTGAAACCTTAACTGATTTCGTTCAAAAGCAAT
CGAATGAAACATTCAATGGAGAAATCAATCAAGCTTTGGAAAAATTCTTC
ATGCAATTCCCTACGAAAAACATTTGTAAACAATTCGTAACCCAGTGTGG
CTGTAAAGATGTGGTAAAAGACAGATCTCGACGTGATGCTCCAAAGATGC
TGGATGAAAATGTACAAAACATTTTATCAAGTATTGAAACCTTAACTGAT
TTCGTTCAAAAGCAATCGAATGAAACATTCAATGGAGAAATCAATCAAGC
TTTGGAAAAATTCTTCATGCAATTCCCTACGAAAAACATTTGTAAACAAT
TCGTAACCCAGTGTGGCTGTAAAGaaaaatgcaccACTATTGACAAGGAT
TCCAGCGATGTAAAATCAACAGCTAAATTCATTCGTGGACCACCGaaaaa
tgcaccACTATTGACAAGGATTCCAGCGATGTAAAATCAACAGCTAAATT
CATTCGTGGACCACCGGGTCCTCCAGGACCAAGAGGATTAAGCCTAGAAC
CACCACGATTGATCAAAAGCTCACTTGATGACCGAATTGTTAATCTAACT
GATTCAACAACATTCGAATGTTCTTTTTCTGGAAACCCATTGCCTgaaat
ttcttggaaaagttCAGCTAAAAACGCTAAAACCATCACTTGGAAGAATA
AAGAAAACCTTGAAGTTTCAAGTCGAATGATCATCTCAAATATTTCATGG
AGCGATCAAGGACCGATCGAATGCCGTGCGAAGAGCTTGCTCGGAGAAGT
TAGTGTTTCAGGAAATCTTCACACATTGTGGTCCTCCAGGACCAAGAGGA
TTAAGCCTAGAACCACCACGATTGATCAAAAGCTCACTTGATGACCGAAT
TGTTAATCTAACTGATTCAACAACATTCGAATGTTCTTTTTCTGGAAACC
CATTGCCTgaaatttcttggaaaagttCAGCTAAAAACGCTAAAACCATC
ACTTGGAAGAATAAAGAAAACCTTGAAGTTTCAAGTCGAATGATCATCTC
AAATATTTCATGGAGCGATCAAGGACCGATCGAATGCCGTGCGAAGAGCT
TGCTCGGAGAAGTTAGTGTTTCAGGAAATCTTCACACATTGTCTCACCCA
GTCATAAATACCACAAAAGCATTGGTTTTTGCACCACAAGGAGTTGATTT
CCACTTCCCTTTGTGTCAAGTACGATCCAATCCACCTGCCAAAATTACAT
GGAAAAGAATATTCTGGTCATTACCAGCCGGTCGCTTTCATATCCGAGAA
AaagagttgcttataaaagatgtaCGATATTCAGATGAAGGGTTCTATGT
CTGTGAAGCTGAAAACATGCTTGCTCACCCAGTCATAAATACCACAAAAG
CATTGGTTTTTGCACCACAAGGAGTTGATTTCCACTTCCCTTTGTGTCAA
GTACGATCCAATCCACCTGCCAAAATTACATGGAAAAGAATATTCTGGTC
ATTACCAGCCGGTCGCTTTCATATCCGAGAAAaagagttgcttataaaag
atgtaCGATATTCAGATGAAGGGTTCTATGTCTGTGAAGCTGAAAACATG
CTTGGTAAAGCTCAAATGACAGTCCAATTGAAAATACGTTCGTTGGAATT
GCAATCGTCCTCACCTTCATTCATCCAAACTACAAAAAATGTTACATCCA
TCGAATGTTCAGcatacggaaacacccgaatAATGACCGGGACTATCACG
AGATCCGGAATGCCAATCCCTTCCGTGAGCGAATCTATAAAGGCCAATTT
ATTAAATGTGAAAGCTGTAGTATCTGAGAATGGAACATATCTTTGTACTG
TCCGAAGTGGAAGTGAAAAGGTTAACAGTGCAACTGTGGTTAAGATTTTA
CGTAAAGCTCAAATGACAGTCCAATTGAAAATACGTTCGTTGGAATTGCA
ATCGTCCTCACCTTCATTCATCCAAACTACAAAAAATGTTACATCCATCG
AATGTTCAGcatacggaaacacccgaatAATGACCGGGACTATCACGAGA
TCCGGAATGCCAATCCCTTCCGTGAGCGAATCTATAAAGGCCAATTTATT
AAATGTGAAAGCTGTAGTATCTGAGAATGGAACATATCTTTGTACTGTCC
GAAGTGGAAGTGAAAAGGTTAACAGTGCAACTGTGGTTAAGATTTTACCT
CCCGAGAAAACAGAAAAGACAAATCTGAACCCAGAAACCTCCTTACCCTC
GATCATAGCTCTAGCTGGTGACGTTGTCAATATCAGTTGTTTTGCATACG
GGAATACTCAATATATGAACGGGACGATCACAAATGCGGATGTACCGGTA
CAGAATGTTACCATCATAACGAAAGATGATTTATTTTTGGTGAAGGCACT
GGTGGTTGATGACGGAACTTTTGTTTGTACCATCCGGAATGAGACAGATG
ATAAAGTTATTGTTGAGAATATTTCACGCGTCATATTCTTGCCTCTCCCG
AGAAAACAGAAAAGACAAATCTGAACCCAGAAACCTCCTTACCCTCGATC
ATAGCTCTAGCTGGTGACGTTGTCAATATCAGTTGTTTTGCATACGGGAA
TACTCAATATATGAACGGGACGATCACAAATGCGGATGTACCGGTACAGA
ATGTTACCATCATAACGAAAGATGATTTATTTTTGGTGAAGGCACTGGTG
GTTGATGACGGAACTTTTGTTTGTACCATCCGGAATGAGACAGATGATAA
AGTTATTGTTGAGAATATTTCACGCGTCATATTCTTGCCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:301523..305556 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1252-1545:3741 |
| Aaloc | 955-1248:2932 |
| Aaloc | 724-951:2304 |
| Aaloc | 409-720:1842 |
| Aaloc | 340-408:1663 |
| Aaloc | 124-336:1193 |
| Aaloc | 1-120:1 |
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