TCONS_00015369 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015369
Unique NameTCONS_00015369
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length344

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015369 ID=TCONS_00015369|Name=TCONS_00015369|organism=Clytia hemisphaerica|type=transcript|length=344bp
gaccctttcagagactaacttttgaatttgtacccctttgagagactttt
gaggaatgagaaaaggtacccttatggctcgcacatacccgatAACCCAT
TTTGCCCCCCGGATCACTCCAAACTTTTCAAGTGTCATTAAGTCGACATT
ACTCGGACATTACGCCTTTTCATTCTTTTCAGTACCAGAAAAGTTGCGGC
CCTAGGATCCTTtagtttgaagaagaaaatatagattatttaatgttttt
tttctattatatctcttttttaatttattagtTTTATTATTTCTATTAAA
TATAATTTCGCCAAATGCTTTTTGGAAGAAAAGTACAAGAAAAT
Run BLAST on NCBI

transcript from alignment at sc0000210:4663..5006

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015369 ID=TCONS_00015369|Name=TCONS_00015369|organism=Clytia hemisphaerica|type=transcript|length=344bp|location=Sequence derived from alignment at sc0000210:4663..5006 (Clytia hemisphaerica)
ATTTTCTTGTACTTTTCTTCCAAAAAGCATTTGGCGAAATTATATTTAAT
AGAAATAATAAAactaataaattaaaaaagagatataatagaaaaaaaac
attaaataatctatattttcttcttcaaactaAAGGATCCTAGGGCCGCA
ACTTTTCTGGTACTGAAAAGAATGAAAAGGCGTAATGTCCGAGTAATGTC
GACTTAATGACACTTGAAAAGTTTGGAGTGATCCGGGGGGCAAAATGGGT
Tatcgggtatgtgcgagccataagggtaccttttctcattcctcaaaagt
ctctcaaaggggtacaaattcaaaagttagtctctgaaagggtc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008592XLOC_008592Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015369-exon-sc0000210-1491911889:4663..5006TCONS_00015369-exon-sc0000210-1491911889:4663..5006Clytia hemisphaericaexon
TCONS_00015369-exon-sc0000210-1510915933:4663..5006TCONS_00015369-exon-sc0000210-1510915933:4663..5006Clytia hemisphaericaexon
TCONS_00015369-exon-sc0000210-1575043694:4663..5006TCONS_00015369-exon-sc0000210-1575043694:4663..5006Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210supercontigsc0000210:4663..5006 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.368015	0.878695	1.83709	4.77852	3.74914	2.37288	6.31848	2.95984	7.01949	8.01257	7.12637	5.9088	7.72599	8.40551	4.46899	3.798	5.75248	5.5189	10.3518	9.02711	9.13276	9.08847	7.86058	5.84803	0	2.26574	7.10394	14.3858	22.1048	24.9031
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015369 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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