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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:1515524..1518121+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036036 ID=XLOC_036036|Name=XLOC_036036|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2598bp|location=Sequence derived from alignment at sc0000011_pilon:1515524..1518121+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTGGTCATCAATCGATTCCGTTTTAAGGAATCCCCTGATCTGGCAGA
GACAGTACTTAAGAAGCAAAACAAACCCAAGAACCACAACGGTTTTCTCT
ACTGTAGTattaaaaaagcaaacaaaatgcCGCATATACGAATATTCACG
AATGTGGCGAGAGACAAATTTGATCAACAATCAATGGAGAAAATGATTGA
AGAAATGGCTGTTATCAATGGCAAACCTGATAAAGTAAGTGAGTAGCTTT
TTCATTTGGGTACATCCCTATACCCTGACTCTTTATTGACTAAGGGGTAG
ATTCGGGTGGAGTCGTTTACGTATTAAGTGACAGACAGATCCGGTCCTAC
TACTCGACCaaatttcgtccctggtggaaaaataagttgactttgatttc
attttcattcgaaACTCAATGCAAAAATTGCACTATAAAACCATCCCACT
GTATTTTTTGAGCTATTCCCATTttgatttcgatagaaatttttatacaC
GCTACAGGTAAAAAGTTCCACCGGCGGAGCTCTTAGACAGGGATGTCAAG
TGTTAAACAAGATAGGTGTAATAATGCAATATTAGTCtgctgaatcacag
acctcaaAAACTGCAAGTAGTTATATAAGAGTCTCCTTACGCTAGAGGAT
GAGTAGAAGCCTATGGACAAGGGAAATATCgtttattaagcatcctctgc
tagaatcatggtcgaaatattttagaaaaaagggaaTTAATTCCcacgaa
ttttcaaaaccattcaaacgatttggaagtgctctcaagtaggttggaag
ggtagagttttttaagatctgaggatccaaaagtttaaaaatggtccaat
agggctcagaatagagcctggaagtctataaacccgagccaaattgaaat
atccgattaaatttaagagatggctcaaaatcgactttctcgcccgaact
ccaaatttcggaAAACGAGTAATTAAGCTagattctcaataaattttgac
ctgaccatgattgtataaggagcacgaatcttTTAGTGGATACCAGCAGC
CGAATACGATATGTGTTATGTGCTACTTTTAGGTTGTATAAACTATAATA
ATGTCCTCACCGTATCctactttttcctctttttcagcttttcatgGCAT
CTGTGAGTGCTGGAGAAGTATTCGTGATGAACAAATCACAAGAGCCTGCT
GCACATGTCGCGTTTCTTTCCATTGGTAAAATCGATGAAGAATCGAATGC
TAAATATTCCGAAATCCTGTTCAGATTTTTGAACACCAAAGATATTAAAA
ATGAAAGGTACACATTCTACCGGCCATTTACCTCCCATTCATGCAAatac
cattgatttcaaagccccgaagtGGCTAAAGCTTTTAAACTCttagatgg
gaaatgaaacaaCTTATTTTCCAATCCAAAATGCAAACAGAGAAAGCGCA
AGATTCAATCCCTTATTCGAAAAGCGGCAAAAATCTTAccgcttcacttt
tttttgctttaaagtCTTTAACTCTTTAAGTGCCACAGTCTGCTGCGCGG
ACCTGTCTGAATGATAGAAAAGTACCCATTTGTAAAACTCCAAACCAATT
CACTggaagacagaatcaagtaaagcagggccaaatttggaggttcttgg
actactcgttgaccaaaaatggtcaagaacggtcaaaatcttaaaaaagt
ggatttttgtcaaacttttgcaatttttttactttttggcttaaaatctc
gctaaaaagactcacttttgatatttcttttgcTTGACCATGCAGCCCAA
TCCAATTTTTAcaagttagaccaaaaatgacgatttctaactcaaactgg
gcattacaggagggcttcgccctcctacatagcccatgaccaatatactc
gtcattggcacttaaagggttaagaaagGTTGACAATTCCTCTCGAGGCC
ttcgggcttcaaactcaatggcaAACATAGGCTAGGCTCCCTCTCGTCAA
AGTGAAATTTGCTGATAGTAGCTTCCCTTAATAAAGTTTATAAGTTATCA
TATTGTCTTtaaatataatctgcagcgcaGACAAAagaggctgtaacttt
tgataaaaccaAATTAACCAAATgaatagcctggatatccagctttaaat
aaaaaaacctcaacatacaaaggtTTAAAATTACAGCTTGGCCTCCCCAG
AGAATGAAAGGAAGCTGTATCTCTTCACTAGCGAGTGGAGAATTATACTT
TTGTTACAGAATTTCTCCGTGCCATGTAGATCAGACCTTACGGCATTAAC
GAAGTGAGTGCATACAAGCTGACTGCATTCTGATTTAAGAATGTAAAGCA
CTTTAAGAAGACCAGGCCGTAAACCAGAAACATAAATTAccgcctggata
tccaggctaccaaATGACATACTTTTTTCGTTCTTTAGAATTCAATGTAC
ATTTCACAAcgtatcaaaacaaaactttggATGGAACAACGCTTTGGTAT
CCAGACTATTCCCAGACACCCCGAAAACTGAAACTCCTCAAGAACCTGCT
CAACAATCAACTCAAAACAAAGGGTCTTCAGCCTGTGTTATATTGTAG Coding sequence (CDS) from alignment at sc0000011_pilon:1515524..1518121+ >XLOC_036036 ID=XLOC_036036|Name=XLOC_036036|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000011_pilon:1515524..1518121+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTGGTCATCAATCGATTCCGTTTTAAGGAATCCCCTGATCTGGCAGA
GACAGTACTTAAGAAGCAAAACAAACCCAAGAACCACAACGGTTTTCTCT
ACTGTAGTattaaaaaagcaaacaaaatgcCGCATATACGAATATTCACG
AATGTGGCGAGAGACAAATTTGATCAACAATCAATGGAGAAAATGATTGA
AGAAATGGCTGTTATCAATGGCAAACCTGATAAACTTTTGGTCATCAATC
GATTCCGTTTTAAGGAATCCCCTGATCTGGCAGAGACAGTACTTAAGAAG
CAAAACAAACCCAAGAACCACAACGGTTTTCTCTACTGTAGTattaaaaa
agcaaacaaaatgcCGCATATACGAATATTCACGAATGTGGCGAGAGACA
AATTTGATCAACAATCAATGGAGAAAATGATTGAAGAAATGGCTGTTATC
AATGGCAAACCTGATAAActtttcatgGCATCTGTGAGTGCTGGAGAAGT
ATTCGTGATGAACAAATCACAAGAGCCTGCTGCACATGTCGCGTTTCTTT
CCATTGGTAAAATCGATGAAGAATCGAATGCTAAATATTCCGAAATCCTG
TTCAGATTTTTGAACACCAAAGATATTAAAAATGAAAGcttttcatgGCA
TCTGTGAGTGCTGGAGAAGTATTCGTGATGAACAAATCACAAGAGCCTGC
TGCACATGTCGCGTTTCTTTCCATTGGTAAAATCGATGAAGAATCGAATG
CTAAATATTCCGAAATCCTGTTCAGATTTTTGAACACCAAAGATATTAAA
AATGAAAGAATTCAATGTACATTTCACAAcgtatcaaaacaaaactttgg
ATGGAACAACGCTTTGGTATCCAGACTATTCCCAGACACCCCGAAAACTG
AAACTCCTCAAGAACCTGCTCAACAATCAACTCAAAACAAAGGGTCTTCA
GCCTGTGTTATATTGTAGAATTCAATGTACATTTCACAAcgtatcaaaac
aaaactttggATGGAACAACGCTTTGGTATCCAGACTATTCCCAGACACC
CCGAAAACTGAAACTCCTCAAGAACCTGCTCAACAATCAACTCAAAACAA
AGGGTCTTCAGCCTGTGTTATATTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:1515524..1518121 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 406-564:2440 |
| Aaloc | 235-402:1138 |
| Aaloc | 1-234:1 |
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