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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000048_pilon:653675..657576- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038628 ID=XLOC_038628|Name=XLOC_038628|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3902bp|location=Sequence derived from alignment at sc0000048_pilon:653675..657576- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGAATTACAAACAAGATTTGTAAATGAACCCTCCAATTCTTT
ATTCTGCCCAATATGTCGAAAATTATTTCAAGATCCATCAATATCAATTG
CATGTGGACATACGTTTTGCAGATCATGTGTTGACAGTAGACTAAGATCA
AGATCACATATGACTTGTCCTTTGGATAATGCACAAATTGAAACAAACAG
TCTTGTACCAAACAAAGCTGTGCAAGGTCAGGTTGAAGACCTTCTTATTT
ACTGCCGATATGGGTTGATACCAAATCCTCTTGAAGAAGGTTCAGAGTGG
GAAATTGACAATACTGGATGTACTGAACATATTCGCCTCGGTCAACGTTA
TGAACATGAGGAAGTTTGCGGTAAAGCATGGGTGGATTGCCCTAATTCCA
AGGAATGTGAAAGGATGAGAAAAGAAGAATTGGACACACATTTAAGGAAT
TGTTCTAAACATATTTGTCCGAATCAAAAGAAAGGTAAATCTTCATTTTT
TTTCATTTTCATCTATTCAAACAGATCTTTTTCTTTTTTCTTCATTTGAA
ATATTGCGCTCACAGATAATTTGTTATTAATTAAGTTTTATTTAAATGGC
TAATACTCTCAAGAACTCAAAAGAGACAGACCTGTATGCCTAATTATTTT
TAATAAAAGCACTTAGTTAGAATTTATCTTCAAATTTTATTCATAGGGTG
TAGTTTCAAAGGCTTCCAAGATGCTGTTCAACAACACTTACACAATTGTC
AATTCAATGAAAGTGCAGTTGAATGGGATGTTCTTACCAGTCTTGATGTG
AGTTTTGCTATTAAACATGTAATTTTTTTAAACCTCCGTGCAATTTATTA
AATGCATTATTTTAGTCACATATGAGCAGGCTTTGATAAATTATTCTCTT
TTTATTCATGGATAGGAAAATAATTATCTAAGTTTACAGAATAAGGAATT
TAACTGAATTTGGAATAAAAATGAAATGGTTCTCAAGGCATTGTTTTGAT
TTTTTATGTAAATTTTTTTTTTACAGGATGAAAATGCAATGGATGGGTTT
CAAGCAAAATCTTTGGTTAAAGCTGTCAAGAATCTGAATGAAAGGGTGAG
CGCGTTAGAAAAAGGCAAAGATGACATCATGTTTTTAGTGCAAAAGTGTA
ATGAGTGAGTATGAATTATTTTTTAAAGTAGGCTTTTTCGATGGAGTTCT
TTTGATTTCAGAAATTCTGTGCCACCGCATACATTGAGCTATAAGCAAAA
AGCTCGTACCCAAAAATTTTAAAAATGTCAAAAAATGAAGGTCTTCAAAT
CTCTCTAAAACCTATTTTTATGGGAAGCTATGGTATTTTGTAGCAAAAAG
CAAAAAAAATAGAGCTTAACCTCGCTTTAGAAATTTTTTATCCCATTTTT
TAGGTTTTTGTAAAATCGCAGGCCAAAATAGGAGAAAAAATCATCAAGTT
TTGCATTTACTTCTCATTGACTTCATTTTTAACCTTTCTTTGCTTGAAAA
TTCTTCAAATAGGTAGAGTATATCAGAATATGCAAAAAATGGAGTCAAAA
ATGCAGAATTACAATGAACTAGAGGTCCTGCAAGGTGGATTTTCTCATTT
TTGATCAAAATGTTTTGTAGGCTAATTTTGGAAAAACCCGGGTTTTTTTA
GGATTTAGCTCATGTTTTAACTTTCTAAGTTTATTTTTCTCATTCTAGTA
TGTATTTCTGACAACTTTACATTAAAATTATAATATTTCTTACAAATTCA
GGAAAATAATTACATATTTCTCATTTATGATTTTTAGCGTTTCATCACTT
TTTTGGCCAAAAATGGGTCATTTTTAGGCTGGAATCCGAAAGAACCGGAA
TATTAACTTGAAAATAACCCTATCATGTTATATATCAGTGGAAGCGAAAT
TTTGAGTAGATTTTGAATATCCAAGTTTCATGTCCTGAAAAAGAACTCAA
CTCAAATTATTATGCTTTAACAGCTAAAAATAGACATGGGTACGAGCTTT
TTGCTTATGGCTATTGAACAAAATTCACAAGGGCTAAATAAAGGCTATCC
CTCAACAGGATGAAACTAGCTGTCTAACTCGGCTTTTGTCGTGATGGAGA
GATTTATTTTAGCTATAAAGAAAATTAACCCGTTTTTGTTACCCCTTTTT
TATGCTCTTGAATAAAAGAATGTAAGGCTTTTACAGGCTTTGGATTTTTT
TATGATTGTTTAAAGAACTTATTTCAATTTAAATCTATTAAAACTGTCAA
TATTTTTTTAGAAATGTGATCAATTTGTCTGTTCAAGTTGAAAAGCTTGC
TTACAGCATGGAGCACATACGTCAAGCCCAACATGCCATGATGAGGGAAA
AGCAACTTGAGTCTCAATCAGCATCAGATTTGAGATCACCCAACCAAGGT
AATTTTCATTTGCAAGCTCAATAACAGTCTGAAGCTTTTTACATTATTTT
GTATTATTTATTGACTTTTTTATGTGCTTTATGATGAAAGTGTGAGAAAA
GTCTCACACGCTCACAATCTTGCTTTCAGGGCTCCCCTCCTCAAATCTCC
TCAATTCTCCTCAAATCTCCTACTTTTTCTCGTATTTCTCCAATATCTTC
TTCAAATCTCCTCAATTAGATTTGACCAAAAATAAAAAAAGCATTGAAGG
TAGTATCGCTGGCCTTTGAAAGATGTTTCGAAAGTTGATTTTCAAGAACA
ACATGCATAATCTTTTGCTCGCTTCGCTCGCACATTTCTTTACTCTAATA
TCATGTTTCCATTTACTCAAAAACTCGAAATCAGTGGCGTTTTAGCAGGG
ACAGGGGCCACGACCACCCAACAGAGCTTTTTAAAGGGGGCCCTAAAAGA
GCAAGGGACACTAAAGGAGATTTTTAAGACGCCCCAATCTTAAAAATTAC
ACTTTATCCCCCCTTAATTGCCGCCCAGGACCAATTTTACTAAAATGATT
TTAAATTACTTTCAATTTTTCTTGCTCGCTTCCCTCGCAATCTAGTTATT
TGGTGATTTCTTTGAAATCTTGCTAATTTACAAGTTTTTTTTTTGTGTAA
AATGTAGCTTTATTGAATGAAAACCTAACCGGCACCAAGACCAATTTGCT
AACAACAATATTATTTAAAACATAAAAACTCAATTTTTTTCAGTCGCTTC
GCTATCGCAGTACACAAAAATTTCTTTGAGTTTCTTTTTGATCTAGCATA
TAATTTGTCTCTTTTTCTTTCATGATTTAGGGTATCTTGGCAATTCCATT
TTAAAAAGCTTTAATTTTAGAATTTATAAATCTTTTCAGGTCTTTGTAGT
TTTACACTTAGAGCCACTGCTCCCCTCTAAGGATAATTACCTAGGACCCC
TCCCCAAGAAGCAGACTTTGGTAAACCTTTCCTTTGTTTAATTTGTAAAA
AGCTCATTACCCAATTTTTTCATTGAACAGTACAGTGTTGCTTTTTTAAC
AACAAAAAGTATCATTTTAACTTGACAAGTTTACCGTCAAGAAAATCTCC
TCAATTTTTCTAAAAATATATGAAAAACTTCTTAAATTGTTACAGAAATC
TCCTCAAAAAGGCAAAAAATCCTCCTTAATTCTCCTTGATTCTCCTTAAA
TTTGAAATTTTGAAAGCTGTGGGAACCCTGTGCTTTGTATATCTTTTATA
AGAGATATGATGAATGTTATAAGAGGGGTTTCAATTTTTGTCTGTGGCAA
CTTTACTATATAACCAAATTTTACCAGAAGTTAAAATAAACAAACATGCC
CATATTTTACTTATCACGATATGGATACCTAAGCTAAAGCCAAGGAATTA
GAAATTTTCTTTCTAATTACAGCATATCGTAGAACAAGCTCAACCACAAC
TCTAAATAATTTCAACATGCCACGGATGAGATACAGCATACAGGGACCAT
CT Coding sequence (CDS) from alignment at sc0000048_pilon:653675..657576- >XLOC_038628 ID=XLOC_038628|Name=XLOC_038628|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0000048_pilon:653675..657576- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGAAGAATTACAAACAAGATTTGTAAATGAACCCTCCAATTCTTT
ATTCTGCCCAATATGTCGAAAATTATTTCAAGATCCATCAATATCAATTG
CATGTGGACATACGTTTTGCAGATCATGTGTTGACAGTAGACTAAGATCA
AGATCACATATGACTTGTCCTTTGGATAATGCACAAATTGAAACAAACAG
TCTTGTACCAAACAAAGCTGTGCAAGGTCAGGTTGAAGACCTTCTTATTT
ACTGCCGATATGGGTTGATACCAAATCCTCTTGAAGAAGGTTCAGAGTGG
GAAATTGACAATACTGGATGTACTGAACATATTCGCCTCGGTCAACGTTA
TGAACATGAGGAAGTTTGCGGTAAAGCATGGGTGGATTGCCCTAATTCCA
AGGAATGTGAAAGGATGAGAAAAGAAGAATTGGACACACATTTAAGGAAT
TGTTCTAAACATATTTGTCCGAATCAAAAGAAAGATGGATGAAGAATTAC
AAACAAGATTTGTAAATGAACCCTCCAATTCTTTATTCTGCCCAATATGT
CGAAAATTATTTCAAGATCCATCAATATCAATTGCATGTGGACATACGTT
TTGCAGATCATGTGTTGACAGTAGACTAAGATCAAGATCACATATGACTT
GTCCTTTGGATAATGCACAAATTGAAACAAACAGTCTTGTACCAAACAAA
GCTGTGCAAGGTCAGGTTGAAGACCTTCTTATTTACTGCCGATATGGGTT
GATACCAAATCCTCTTGAAGAAGGTTCAGAGTGGGAAATTGACAATACTG
GATGTACTGAACATATTCGCCTCGGTCAACGTTATGAACATGAGGAAGTT
TGCGGTAAAGCATGGGTGGATTGCCCTAATTCCAAGGAATGTGAAAGGAT
GAGAAAAGAAGAATTGGACACACATTTAAGGAATTGTTCTAAACATATTT
GTCCGAATCAAAAGAAAGGGTGTAGTTTCAAAGGCTTCCAAGATGCTGTT
CAACAACACTTACACAATTGTCAATTCAATGAAAGTGCAGTTGAATGGGA
TGTTCTTACCAGTCTTGATGGTGTAGTTTCAAAGGCTTCCAAGATGCTGT
TCAACAACACTTACACAATTGTCAATTCAATGAAAGTGCAGTTGAATGGG
ATGTTCTTACCAGTCTTGATGATGAAAATGCAATGGATGGGTTTCAAGCA
AAATCTTTGGTTAAAGCTGTCAAGAATCTGAATGAAAGGGTGAGCGCGTT
AGAAAAAGGCAAAGATGACATCATGTTTTTAGTGCAAAAGTGTAATGAGA
TGAAAATGCAATGGATGGGTTTCAAGCAAAATCTTTGGTTAAAGCTGTCA
AGAATCTGAATGAAAGGGTGAGCGCGTTAGAAAAAGGCAAAGATGACATC
ATGTTTTTAGTGCAAAAGTGTAATGAAAATGTGATCAATTTGTCTGTTCA
AGTTGAAAAGCTTGCTTACAGCATGGAGCACATACGTCAAGCCCAACATG
CCATGATGAGGGAAAAGCAACTTGAGTCTCAATCAGCATCAGATTTGAGA
TCACCCAACCAAGAAATGTGATCAATTTGTCTGTTCAAGTTGAAAAGCTT
GCTTACAGCATGGAGCACATACGTCAAGCCCAACATGCCATGATGAGGGA
AAAGCAACTTGAGTCTCAATCAGCATCAGATTTGAGATCACCCAACCAAG
CATATCGTAGAACAAGCTCAACCACAACTCTAAATAATTTCAACATGCCA
CGGATGAGATACAGCATACAGGGACCATCTCATATCGTAGAACAAGCTCA
ACCACAACTCTAAATAATTTCAACATGCCACGGATGAGATACAGCATACA
GGGACCATCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000048_pilon | genome | sc0000048_pilon:653675..657576 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 853-930:79 |
| Aaloc | 715-849:1641 |
| Aaloc | 586-711:2877 |
| Aaloc | 487-585:3205 |
| Aaloc | 1-483:3903 |
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