XLOC_040170 (mRNA) -

Overview
NameXLOC_040170
Unique NameXLOC_040170
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000012_pilon:2608747..2609990-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040170 ID=XLOC_040170|Name=XLOC_040170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1244bp|location=Sequence derived from alignment at sc0000012_pilon:2608747..2609990- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGACCCATCAATGGTGAAATATAACCCGTGGCGTTCTCCTGGCGCCGC ACCAATTAATTCACCCTGTGGGGCGGCTGGCGGAAATCCAGATGGATGTT TGGGCGGACCATACTGTGGGCAAATGAAAGGAGGATTCGCATACGGACCA AGGTTATACATTTAATTCAAAGTAGCTTCAGATATTTTCATTAAAAAGGT TGGGTCTTTGAGTTTATATTTCCCTTTACATGACTGTCTAATAATAATTT TGTAATTGACAAAAAGTTGAAGTGGGTGCCACAAACCATTTTTTCGTTAT CTAACTTGGTTTGTTAGATTCCTCAAGTGGATTCCTTAATGACTGTTAAG TAAAAGTCACACCTAATTGTGTTAAAGTAGATAATTGCTATGCTGATGCA GACTTTTTTGCATATTCTATCACAACTGTCACAAGTAAGAATTAAACAAA CATTCTTTTACATATTAGATTGAAAGATTTGGACCTATCCTCACATCACA AAGCCTACGTCACTAACTGGACGCGCGGGGAGGCAGTAGAGGTTGCATGG GGTATCCGAGCGAACCACGGAGGAGGCTATTCTTACAGGCTATGTAAGAT GCCAAAAGAAGGGCGGAAGGCGTTAACAGAGGAATGCTTCCAGCAAACGC CATTGAGATTCGTCGGTGATAAACAGTGGGTACAGTATGGGGAAGACGAA TCAACTAGATATGAGTTCACCGCAGCCAGAACTGATAATGGTAAAGCTAT TTCATCAAATTCTTTCTAAACAATGCCTGGAGGTGCTTTGGAAAGAATTC GCTGGCCACTTTTATCAACTATTTACAACTTAACTTAATATTGTGTGTGA GAATCCATCAAGAAGTCTGATTTACCTTTCTTTATTAAAAAGATTCTCTC AAAATGTTTTGCATGATTTAAGGTTGTTTAGCTAAATATAAAAATCTATT ATTCCAGGCACCACACCACCAGGATCCCAGTGGACCCGCAACCCAATCCC ACCATGTAATGGCTTCGCTGGCGGTATAAATGAAGATCATCCGTGTAAAA ATGGGACCCAGTTCCCAGCCCCTGGACCCGGGCTGGAAGGATTCGGTGTT AAGTTTAAAAACATTTTATGGACATTTGAGTTTGTGATTATTGACATGTT GCACATTCCTGAGGACGTTGAACCAGGAGAATACGTGGTTTCGTTCAGAT GGGACGGTGAACAATTTCCACAAGTGTGGAATATGTGCTCTTCT

Coding sequence (CDS) from alignment at sc0000012_pilon:2608747..2609990-

>XLOC_040170 ID=XLOC_040170|Name=XLOC_040170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000012_pilon:2608747..2609990- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGACCCATCAATGGTGAAATATAACCCGTGGCGTTCTCCTGGCGCCGC
ACCAATTAATTCACCCTGTGGGGCGGCTGGCGGAAATCCAGATGGATGTT
TGGGCGGACCATACTGTGGGCAAATGAAAGGAGGATTCGCATACGGACCA
AGAAAGACCCATCAATGGTGAAATATAACCCGTGGCGTTCTCCTGGCGCC
GCACCAATTAATTCACCCTGTGGGGCGGCTGGCGGAAATCCAGATGGATG
TTTGGGCGGACCATACTGTGGGCAAATGAAAGGAGGATTCGCATACGGAC
CAAGATTGAAAGATTTGGACCTATCCTCACATCACAAAGCCTACGTCACT
AACTGGACGCGCGGGGAGGCAGTAGAGGTTGCATGGGGTATCCGAGCGAA
CCACGGAGGAGGCTATTCTTACAGGCTATGTAAGATGCCAAAAGAAGGGC
GGAAGGCGTTAACAGAGGAATGCTTCCAGCAAACGCCATTGAGATTCGTC
GGTGATAAACAGTGGGTACAGTATGGGGAAGACGAATCAACTAGATATGA
GTTCACCGCAGCCAGAACTGATAATGATTGAAAGATTTGGACCTATCCTC
ACATCACAAAGCCTACGTCACTAACTGGACGCGCGGGGAGGCAGTAGAGG
TTGCATGGGGTATCCGAGCGAACCACGGAGGAGGCTATTCTTACAGGCTA
TGTAAGATGCCAAAAGAAGGGCGGAAGGCGTTAACAGAGGAATGCTTCCA
GCAAACGCCATTGAGATTCGTCGGTGATAAACAGTGGGTACAGTATGGGG
AAGACGAATCAACTAGATATGAGTTCACCGCAGCCAGAACTGATAATGGC
ACCACACCACCAGGATCCCAGTGGACCCGCAACCCAATCCCACCATGTAA
TGGCTTCGCTGGCGGTATAAATGAAGATCATCCGTGTAAAAATGGGACCC
AGTTCCCAGCCCCTGGACCCGGGCTGGAAGGATTCGGTGTTAAGTTTAAA
AACATTTTATGGACATTTGAGTTTGTGATTATTGACATGTTGCACATTCC
TGAGGACGTTGAACCAGGAGAATACGTGGTTTCGTTCAGATGGGACGGTG
AACAATTTCCACAAGTGTGGAATATGTGCTCTTCTGCACCACACCACCAG
GATCCCAGTGGACCCGCAACCCAATCCCACCATGTAATGGCTTCGCTGGC
GGTATAAATGAAGATCATCCGTGTAAAAATGGGACCCAGTTCCCAGCCCC
TGGACCCGGGCTGGAAGGATTCGGTGTTAAGTTTAAAAACATTTTATGGA
CATTTGAGTTTGTGATTATTGACATGTTGCACATTCCTGAGGACGTTGAA
CCAGGAGAATACGTGGTTTCGTTCAGATGGGACGGTGAACAATTTCCACA
AGTGTGGAATATGTGCTCTTCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040170XLOC_040170-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012_pilongenomesc0000012_pilon:2608747..2609990 -
Properties
Property NameValue
Aaloc433-717:286
Aaloc160-429:776
Aaloc7-156:1245