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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:401991..405323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043115 ID=XLOC_043115|Name=XLOC_043115|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3333bp|location=Sequence derived from alignment at sc0000260_pilon:401991..405323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCGTGGTACGTTCCCTGAAAGATATTTTGGCACTCAAAATAAAAGC
ACGTCATGACTCGCCGTGTGACCAATTCAGTCGTCTCTTCATGACCAAGA
TGTTCCTCATTGCAGCCGTTATAATGGGTTTCGATTATTTTTCCGATCGT
ATTTCATGTATTCATCCGAAGAAAACGGATCTAACGAAAGAGTTTATACA
TGCTGCATGCTGGATATCAGGCTTCTATGTGTAAGTTTTATTGATGTTGA
TGTTTCGTTCAAGCCCGATACAATTTTTTTAGTAAGAGCATTCAAAATTT
GTTGAGCCTTCGGATGTTTTTAACTATTTGAGTATTAAGCCTAAAAATGT
TCTTAACATGTTCTTTTTTTCACCATTTTGTGAGTATGTTGGTCCATTCT
CCTTGGAAATTGAGTTTCTTAGAGTTCTCGTACTCGTCTAACTTAGGCCC
GGCACGAAAAACATTATAATTCGCCGGTCTAAATATTCGATTCGCTGCCT
CAAGTATATATTCACGCCAATTAATACACTACACTGGGCTTGCTAAGACT
TTGCCGTTCTACATCATAGAACGCTTTGATAACGATTCGCTAGTCTATCA
AAAACAAAACAAAACCCCTGTATACTAAGACTTTTTATTGTTTACAATAT
GCTTTTCAATATTTTCTCTTCAGCTACAAAGAAATGAGGGACCGTCCCAG
AGAGAGCGGTTATTATGGAATCCCATACAAAATTGACCACGATGGTATAG
ACACTCAAACACAACAACTTTGTCTTACCAACAATGTTAAAGTATTTCGT
CCAGAATGTCAATCCATGACTCGAATCTATTATCTCCAGTATCAGTGGAT
GCCATTTTATATTGGTGCACTGGGTGTCCTGTATTATCTCCCTTATATAC
TGTTCAGGTGTGTAATATTTTACATGGTCGAATATTTGAAACTATGTACT
TCTTTTTATCGTCAATTACAAATCTTAAAGGACACACCATATGACGTATC
TTCTACCAAACAAAAGAAAAAGAAAAACTCCCTCACCCTCCACAAATTTT
CTCCCGCCGTGCACAAATTTTCTCCCAAACTATTTTGAGTGTATATTTGC
TGATCTGAACGTCACCTCACAAGAAAGCAATCTCTGTTGCAATTTACTCC
TCTTTAATACAAAACGAAGCCATTCTTTTGGTTAGAAGTGACGTAAAACT
TGAATTTAACCAATAGAATGGTTTCATTTAGCTTCGGAGCGGAACGGAAC
CGTAGCGTGTCAACGTAGTCTAAGACCATGTTCACACATTACTGTTCCGT
TTCGCTCCGGTATGATTTTTGTTATGGATCGAATGTGTTCACATTGGTTT
CGGAACGTTTCGAAGTAAGAAAACGAAGCAGTTTCGTTCCGATGAATAGA
GTGGAGTGAAACCGTTTTGCTTTGTAACGTCTCCTTTTTTGACGTTTCGA
ACTTTGACGTTCACACTTGTTTCGGAACTGTTTCGTTTCGGAACGGAACG
GAACCGTAACGTCTGAACATGGTCTAAATCATTCCATTCTTTTCTTTCTT
TATTTTACAGGATTATCAACGTAGATTTGATCAGTTTGAAATCCGTCTTA
AAATCAGTCACCAGTGATGCAGACCATATCGTTCGAAATTACTTCAACTA
TAAAATCAATTCGATCAGTAAATTACGAATGCGAGTGGTCCTGAATTTAT
TCGTCAAATGTCTTTACATTGTTGTCAATTTGTTTGGTTTTTATTTCACT
GATTATTTACTGCATGGTAATTATAGAAGTTATGGGACGGAATATGTGCG
ATGGGCACGTTCAGATTCGGCTCGAAGTCATTTGCCCATCAAGTTTAGAA
AAGGACCTAAGCCAGGTAAAGAATATTCTTCTTATATTGAATTGTATTTC
TATACCGCATAGAATGAAAAAATTTATTTGTCAAGTAGATTTACCGGGTT
TTTAATAGTCTACTTTGTTTATTTGTTCCGTAACCTTTCCTGGTTCTTAT
TGATTTTTTTACATTTCCTGATTCGTTCCTTCCTTCCTTCCTTCCTTCAT
TTATTCATTTCTTTATTTATTCTTTCCTTCATTCATTTATTCCTTCATTT
ATTCGTTCATTAAAAAACAAACATTTTAACGAAAGTAACCTCATTTTTCA
CCCTCTCTTCCCAGGTAACCATCTTCTCCCAACCATGGGTTATTGTGAAG
TCGAAGAAGCCTCCAAAGACCAGTTAACAGTTCACCATAACAGCTATGTA
TTCCTATGTGAAATCTCCACAAATATCCTATACCAATACGTCTTGGTAGT
CCTCTGGTTCCTCTTCATCATCAGCATATGTATCTCCATCATTGGTCTAC
TTAGCGCTTTATTCGGACATTTGTTTAAGCTAACCTGTTATAGTCGAAGC
TCACCAAAGAAGACCATCTATCGCGTAATCACTCTCAGAGAAGCTGAATA
TCTGAATTTTATCAAAACTAAGAATATGGTCATGTATGGTGAAGTGCTTA
GGAAGCTGAAACAACAACGATCTGATTTGCAAGGGAAGATTATTGATGGG
TTTGAAACAAGTAATGGATTTGTTTAATAGAATTTTCTAAGAAGGGACTC
GACGGAAAATAAACAAGAGTAGAGCAGTAGAAAAATGAAGAGATTGGGAA
TAGAAGAATTCTGTAGTAATTGACGAGCCAACCACGCACACACACACACT
TTGATAATAGGAAGTTGAAGGTATATGCGAGGAAGAAATTAGGACACTTC
CAGGAGTAAGCAAGAACACCACCAGGTGGGAGCAAGGACACCTCCAGGTA
TAAGCCTGGACACCTCCAGGTGGAGGCCTGTTTACATTCAGGAGGAAATA
GAACACCTCCGTGAGGAAGCTATGATATCGTCTGGAGGAAGCTATGAAGC
CCTCTGGAGATAACCAGTACACCTCCTGGGGAAACCAGAAGGAGCCAGAA
GGAAGCACTCGATCATACACCCTGATACATATACATACATTTCGTTGTGA
ACACCTTTTAGAAGATAAAAAGATAGCAATTTCACCAAATAAAGACATAA
AATTACACGACTGGCAAACTCGAGAACCATTGTAGAAAACAAGTTGTAGA
AATGCATTTTTAAAACTTCTATATTAGAAGGTTGACAATATATAATGATG
GTGCAAGGTAGAAAAATACAAGAGAACGCTTTCGAGTTAAGTTTTGCTAA
ATGATAAACTCATGGATGAATAAATTTTGTATGAAATATTAATTTTCTTT
TTTTAGCCATGTTCATCAGGAATGGGTTAGAAGTGAAAGCGTCAGCTCCA
AACGCAGTCAATGGTTCGATTCGATTGTGCTGA Coding sequence (CDS) from alignment at sc0000260_pilon:401991..405323- >XLOC_043115 ID=XLOC_043115|Name=XLOC_043115|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2484bp|location=Sequence derived from alignment at sc0000260_pilon:401991..405323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCGTGGTACGTTCCCTGAAAGATATTTTGGCACTCAAAATAAAAGC
ACGTCATGACTCGCCGTGTGACCAATTCAGTCGTCTCTTCATGACCAAGA
TGTTCCTCATTGCAGCCGTTATAATGGGTTTCGATTATTTTTCCGATCGT
ATTTCATGTATTCATCCGAAGAAAACGGATCTAACGAAAGAGTTTATACA
TGCTGCATGCTGGATATCAGGCTTCTATGTATGGTCGTGGTACGTTCCCT
GAAAGATATTTTGGCACTCAAAATAAAAGCACGTCATGACTCGCCGTGTG
ACCAATTCAGTCGTCTCTTCATGACCAAGATGTTCCTCATTGCAGCCGTT
ATAATGGGTTTCGATTATTTTTCCGATCGTATTTCATGTATTCATCCGAA
GAAAACGGATCTAACGAAAGAGTTTATACATGCTGCATGCTGGATATCAG
GCTTCTATGTCTACAAAGAAATGAGGGACCGTCCCAGAGAGAGCGGTTAT
TATGGAATCCCATACAAAATTGACCACGATGGTATAGACACTCAAACACA
ACAACTTTGTCTTACCAACAATGTTAAAGTATTTCGTCCAGAATGTCAAT
CCATGACTCGAATCTATTATCTCCAGTATCAGTGGATGCCATTTTATATT
GGTGCACTGGGTGTCCTGTATTATCTCCCTTATATACTGTTCAGCTACAA
AGAAATGAGGGACCGTCCCAGAGAGAGCGGTTATTATGGAATCCCATACA
AAATTGACCACGATGGTATAGACACTCAAACACAACAACTTTGTCTTACC
AACAATGTTAAAGTATTTCGTCCAGAATGTCAATCCATGACTCGAATCTA
TTATCTCCAGTATCAGTGGATGCCATTTTATATTGGTGCACTGGGTGTCC
TGTATTATCTCCCTTATATACTGTTCAGGATTATCAACGTAGATTTGATC
AGTTTGAAATCCGTCTTAAAATCAGTCACCAGTGATGCAGACCATATCGT
TCGAAATTACTTCAACTATAAAATCAATTCGATCAGTAAATTACGAATGC
GAGTGGTCCTGAATTTATTCGTCAAATGTCTTTACATTGTTGTCAATTTG
TTTGGTTTTTATTTCACTGATTATTTACTGCATGGTAATTATAGAAGTTA
TGGGACGGAATATGTGCGATGGGCACGTTCAGATTCGGCTCGAAGTCATT
TGCCCATCAAGTTTAGAAAAGGACCTAAGCCAGGATTATCAACGTAGATT
TGATCAGTTTGAAATCCGTCTTAAAATCAGTCACCAGTGATGCAGACCAT
ATCGTTCGAAATTACTTCAACTATAAAATCAATTCGATCAGTAAATTACG
AATGCGAGTGGTCCTGAATTTATTCGTCAAATGTCTTTACATTGTTGTCA
ATTTGTTTGGTTTTTATTTCACTGATTATTTACTGCATGGTAATTATAGA
AGTTATGGGACGGAATATGTGCGATGGGCACGTTCAGATTCGGCTCGAAG
TCATTTGCCCATCAAGTTTAGAAAAGGACCTAAGCCAGGTAACCATCTTC
TCCCAACCATGGGTTATTGTGAAGTCGAAGAAGCCTCCAAAGACCAGTTA
ACAGTTCACCATAACAGCTATGTATTCCTATGTGAAATCTCCACAAATAT
CCTATACCAATACGTCTTGGTAGTCCTCTGGTTCCTCTTCATCATCAGCA
TATGTATCTCCATCATTGGTCTACTTAGCGCTTTATTCGGACATTTGTTT
AAGCTAACCTGTTATAGTCGAAGCTCACCAAAGAAGACCATCTATCGCGT
AATCACTCTCAGAGAAGCTGAATATCTGAATTTTATCAAAACTAAGAATA
TGGTCATGTATGGTGAAGTGCTTAGGAAGCTGAAACAACAACGATCTGAT
TTGCAAGGGAAGATTATTGATGGGTTTGAAACAAGTAACCATCTTCTCCC
AACCATGGGTTATTGTGAAGTCGAAGAAGCCTCCAAAGACCAGTTAACAG
TTCACCATAACAGCTATGTATTCCTATGTGAAATCTCCACAAATATCCTA
TACCAATACGTCTTGGTAGTCCTCTGGTTCCTCTTCATCATCAGCATATG
TATCTCCATCATTGGTCTACTTAGCGCTTTATTCGGACATTTGTTTAAGC
TAACCTGTTATAGTCGAAGCTCACCAAAGAAGACCATCTATCGCGTAATC
ACTCTCAGAGAAGCTGAATATCTGAATTTTATCAAAACTAAGAATATGGT
CATGTATGGTGAAGTGCTTAGGAAGCTGAAACAACAACGATCTGATTTGC
AAGGGAAGATTATTGATGGGTTTGAAACAACCATGTTCATCAGGAATGGG
TTAGAAGTGAAAGCGTCAGCTCCAAACGCAGTCAATGGTTCGATTCGATT
GTGCTGACCATGTTCATCAGGAATGGGTTAGAAGTGAAAGCGTCAGCTCC
AAACGCAGTCAATGGTTCGATTCGATTGTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:401991..405323 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1168-1242:76 |
| Aaloc | 772-1164:1168 |
| Aaloc | 466-768:1773 |
| Aaloc | 232-462:2660 |
| Aaloc | 1-228:3334 |
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