XLOC_009845 (mRNA) -

Overview
NameXLOC_009845
Unique NameXLOC_009845
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000023_pilon:758904..760463+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009845 ID=XLOC_009845|Name=XLOC_009845|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1560bp|location=Sequence derived from alignment at sc0000023_pilon:758904..760463+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtatcGCGAGATTTTATTAAATGGACCAAACATTGTTGGATACGTCCG TTTGATGTTGGTCTTCACTGGATGTTTATTCTTCAACAATACTGTCTTCA TCACTTTCGTTTCTCTATCCGCCATATTGGATATGTTCGGTAAGTCGGCA TCATGTACAGTTTGGTTTGCGTGTTCTTCTACATTGTGGATACGCTCGTA CATCTGTCAAATTAGAATATATTAAAGTCCTTTAATTCATGATAGTCAtc acgtaatgttttctacgcaAACACCCTtatattttaaacaatatttcgtt gtttttttttaacttgccactactggcaaaagcgttatgaatatcatgaa tatattaAAGTCCTTTTTAAATTAGCTGTCAGGTAAGTATCAggacaatg ggctcttccagaaagaaattgtacatggggggtggaggatataacaattt ttagtgatttacccctcggacagggtgacttttggcccccggacaatagg ttttaccccccggacaagcatctgctgaccccccggacaccccaaattac ccctggacagagcaaatttaccccccggacaaggcaaattttgatgattt tttgctaccccccggacaaaatatcctccaccccccatttACAATGACAA ATACAAATAACTTTAGATATAGTTTGAACTAGCTTGCGCTTTTGGGCACG TTTGAAAGATAATCGTGAGTGGACTATTACAAAAcgaaaaagttttgaag aaaaCAACTCCTGGCAGAATTATGCTACACATGGATACTAGTTTTACTTC GGTGATTCATCAAGTTTAGATCATCgttactgaaaaatgtttttttatga gtgCGCATGCTATGTATCGggagaaattcaatattcaaaacaagagcagt gcgcatATCCCGAATGTTAGGCGTTTTACGCTCGAATCGTAGGCTATCTT TCTTCCAATATCGTTActgtgaaaaatatttaatagaTTTTACCGACGGC TGATTTTCAAGTATTCTAAACATTAGATTCAACCAGCAACATTTTACACA ATcccaatgttgtttttatttctagATGGATACTTAGCACGCAAATGGAA CCAAGAAACTCGTTTCGGTGAGTGGTTAGATGTTGTTATTGATCTATTTA CAAGAGGTTTACTTTGGTGTCGGGCTTTGCCCAATTTCGGATTCCTGATC TTCGGATTTGAATTTCTAGTTTTCGTTGCTATACAGGCTAACAGCCATAA TAGTGAGAATCGAGCTTGGCAGGAAAGGAAGAGAGGTTTAAATTGGTTGG CTGCAATGACTGTATCTAAAGGCTTTAAGACCATCCCCGGAGCGATTGCT ATCATTGGTTTGTGGGTTCTACCGGTATGGGCTTGCATTATGATGAATTC CGACACATcttttttggttgattttttaagtttttccccGAAAACGGCAG ATTCGTTTGAATTTTTAATCACAGCATTCTTAATAACCTCACGCTTTCAT TGTCTTCATGTAGAGCtctctattttgaaaaattatattttagacTTATT AGAAAGTTAA

Coding sequence (CDS) from alignment at sc0000023_pilon:758904..760463+

>XLOC_009845 ID=XLOC_009845|Name=XLOC_009845|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000023_pilon:758904..760463+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtatcGCGAGATTTTATTAAATGGACCAAACATTGTTGGATACGTCCG
TTTGATGTTGGTCTTCACTGGATGTTTATTCTTCAACAATACTGTCTTCA
TCACTTTCGTTTCTCTATCCGCCATATTGGATATGTTCGatgtatcGCGA
GATTTTATTAAATGGACCAAACATTGTTGGATACGTCCGTTTGATGTTGG
TCTTCACTGGATGTTTATTCTTCAACAATACTGTCTTCATCACTTTCGTT
TCTCTATCCGCCATATTGGATATGTTCGATGGATACTTAGCACGCAAATG
GAACCAAGAAACTCGTTTCGGTGAGTGGTTAGATGTTGTTATTGATCTAT
TTACAAGAGGTTTACTTTGGTGTCGGGCTTTGCCCAATTTCGGATTCCTG
ATCTTCGGATTTGAATTTCTAGTTTTCGTTGCTATACAGGCTAACAGCCA
TAATAGTGAGAATCGAGCTTGGCAGGAAAGGAAGAGAGGTTTAAATTGGT
TGGCTGCAATGACTGTATCTAAAGGCTTTAAGACCATCCCCGGAGCGATT
GCTATCATTGGTTTGTGGGTTCTACCGGTATGGGCTTGCATTATGATGAA
TTCCGACACATcttttttggttgattttttaagtttttccccGAAAACGG
CAGATTCGTTTGAATTTTTAATCACAGCATTCTTAATAACCTCACGCTTT
CATTGTCTTCATGTAGAGCtctctattttgaaaaattatattttagacTT
ATTAGAAAGTTAAATGGATACTTAGCACGCAAATGGAACCAAGAAACTCG
TTTCGGTGAGTGGTTAGATGTTGTTATTGATCTATTTACAAGAGGTTTAC
TTTGGTGTCGGGCTTTGCCCAATTTCGGATTCCTGATCTTCGGATTTGAA
TTTCTAGTTTTCGTTGCTATACAGGCTAACAGCCATAATAGTGAGAATCG
AGCTTGGCAGGAAAGGAAGAGAGGTTTAAATTGGTTGGCTGCAATGACTG
TATCTAAAGGCTTTAAGACCATCCCCGGAGCGATTGCTATCATTGGTTTG
TGGGTTCTACCGGTATGGGCTTGCATTATGATGAATTCCGACACATcttt
tttggttgattttttaagtttttccccGAAAACGGCAGATTCGTTTGAAT
TTTTAATCACAGCATTCTTAATAACCTCACGCTTTCATTGTCTTCATGTA
GAGCtctctattttgaaaaattatattttagacTTATTAGAAAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_009845XLOC_009845-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023_pilongenomesc0000023_pilon:758904..760463 +
Properties
Property NameValue
Aaloc142-624:1078
Aaloc1-138:1