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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000390_pilon:66606..72604+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011134 ID=XLOC_011134|Name=XLOC_011134|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5999bp|location=Sequence derived from alignment at sc0000390_pilon:66606..72604+ (Clytia hemisphaerica_ch_hm2_pilon)
ATgataaaagtagaaaatttcattGGTGGAAAGTTCACACCATGTTCAAA
ACACATCGATAGTTTCAATCCGTCAAATGGGCAAGTACACGCCTGCATCC
CTGACAGCTCGTCTGATGACGTTGAACAGGCTGTAGAAGCAGCTCAAAAA
GCTCTGCCTGGGTATGTTTCCATAGCTAACTCAAACATATTCAAACAACA
ACAAGTTTACAAAAGCTCTTTCTTGATGGTGTTATAtatcaaatttgaat
atgatTAAATATTATACATTAAATATTTTCATGGCTGTTGGTTTCTTTTT
AGATGGAGTGGTTTATCGACACGTGAACGATCTAAAGTCATGATGAAAAT
TGCGGACCTAGTGGAACAACGCCTGGATGAATTTGCAGTAGCGGAGTCCA
CTGACCAAGGGAAGCCAGTGTGGTTGGCAAAAGCTGTCGATATTCCTCGA
ACAATTCTCAATTTCCGATTCTTCGCCACCGCCATTCTTCATCAAATGAA
TGAGTATGTAAAGcattgttattttttgtaacttttattTGTCGAACTTT
TTGACACCGCGTGATTGCAAGTTAGGATAACCTACTACAATATTCTATAG
TTTgaggtattaaaaaaaaacttgacaaAATAAAAGTCTGACCCAAGCCT
TAACAATTTTTACGATTTTGACTGTTCACAGTATTTCTTGATGATTTTTG
CAGGTCGACTGAACAATCAGAGTTTGGGGCGGTGAATTACACAGTGCGTT
GTGCTGCAGGTATAGCAGGTCTCATCACACCATGGAACCTTCCCTTATAT
CTTTTATCCTTCAAGGTGGCGCCTGCGATTGGTGCTGGATGTTGTGTGGT
GGTGAAACCAAGTGAAATGACCTCAGTGACTGCTTGGATGCTCTGTCAGG
TCTTCCAAGAAGCTGGTAAAGAACGCTTTgctcttttttaataataacCA
TTTCCTTGAAAAACTAAGTTCGAGTATATCTACTTGATCTTTACTTCCTT
GACACTCGATTATTTATCCACCAGACTAAACATTAGCATTAATTGATCGT
CTCAATCGTAATAATTCAcgaagaaattgaaagaaaatgtccGAAGATTT
CCCTAACCACTGCACGATGACATACTTTTTATATGTCAACAGGTTTACCA
GAAGGTGTAGTGAACATGGTGTTTGGAACTGGAAAGAACGCAGGAGCCGC
AATCGTTCAACATCCGAAGATTAACCTACTCTCCTTCACTGGCTCCACTG
CTGTCGGCAAATACATTCAAGAGAAAAGTGCTCAACACATGAAAAAGCTC
TCATTAGAGGTAAAATACATGGCCTCTTAAATGTATACTTAGTTGTGAAA
AGACTACTATGGAGATATTCTGAGCCGCAGGTCCTCTTTAATCGTAAACC
TGTGAAGTTTTGTATAGTTTTGGATATCAAATAATTTGAACGATAAATAC
TCAagttaaaattcttttttatcagCTTGGTGGGAAGAACGCGGGAGTCA
TTTTCGCCGACGCCAACTTGGATAAATGTATCCCAACTTCAGTAAGGTAA
ATTGACTGTAAATTGAAACATTGTCTTCGCTAGAAGAAGGTTCATGATTA
CAAGCATTCGGGGTTGTTCATTCCCTCGTTGCATTTCAAAATCCTTCCTG
TGCAAGCAGGCTTTGCAAGGCCTGAAAGTGGCTTTGGAAAGAACCATCCC
GCCCaaaaaaaTACATACGGCTCTTTAAtcttaaaatctaaatctaaaaa
ttttatttacaagCAACAGGAGGGACATCATTTTCGTGCTCTTTCCAAGT
TGTTTCAACCCTCCTGCTCTGGAAACATAAATTGTTCTTCgaaaaagaac
ccttggaaaaaattcttttcatgtcttgaagtgagggtggacgaactaaa
atcagttgttcaacccctggaaattcaagaattactttttaccccctgga
aaatgaaaaacacttctttagaccccctggaagtTCTTCTCGGactaccc
cctggaaatgttcgtccactcCCTGTCTGGTCATataatggaatggccca
ttatgTACGTTTGATCTAGGTGCCTTTCTTAATCttgggtgtttttttct
tttatttctattttgctCAGTCTTGCTACCCGTTGGCACCTCCATTCACA
GTATGTTCAGTTTTCTTCTAAAGTCACTCCCTCCTTCATTTAGGTCGGCT
TTCGCGAACCAAGGAGAGATTTGTTTGTGCACAAGTCGCTTGTTTGTTCA
TCAAGATATTTTTGACGAGTTCTGCAAACGTTACGTTGAAACTGTCCGGT
GAGTAGATTGGTTCAAAGCAATTTGTTCGTTGTAATAATCTATTCCTGTG
GGATTGAAGGAAAGTTTCTCAATGaatgctttttggacctacctaaggta
gtcctttaaattaacccttgtccgttcgttcgtccgttcgtccgttcgtt
cgtctgttgccagcttttctcgggatcggctcattagttttttctaattt
tttgcacaatgatgcaaaatggcaatgcccaaaatgtgacggagcccgat
tttcgaaaaaaagaattttccggccgaaaatggcggaaatatgccggaaa
aactggtttttcggcattttctcgagatttcatcattagttttttctgat
ttttcgctcaaacatgcgtattaacaatgcccaaaacatggcctagtccg
atttttgagaaaaaattttttcggccggaaatatgccggaaatcgcagtt
ttccattggatttttccatataattggttgttttttcattcaaaaagatt
attaataacaatgcccaccatcaagcatgtttcaattttcaataaaatag
atttttgaagccggaactttctaaaaatcgccggaacagccgattttcgc
cggaaaaacggtatttcttgaatttcttgagctgtacttcatattttttc
atgaaattttgcacactgatgcaaaacgtcaatacctaaattgtgacgga
gcccgattttcgaaaaacatttttttccggccgaaaatgccggaaatatg
ccggaaaaaccagttttttgactttttctcgaattttcattttcagtttt
ttctgattttttgcagaaagatgcgtattcgcaatgctcaaaaaatggcc
gagttcgatttttgagaaaaaaaatttccggttgccggaaatcgccgttt
ttgcagattttcattggattttttccttgtatttctatgttcttcacaca
aaaatattattgataacaatgctcaccatcaagcatgattcaattgtcaa
taaaactgatttttgcgaccagaacttcctatttattttttccctacaac
ccttctctctccccccatcaacaatcaatgatgaatttattgtgttgtgt
attttgctaaatgctatattttctgacagatttttttcatttttcttttc
gcattgctaactaactttcatcatcaggtaggtccattcagcatgttgct
tgttatccATAGATCTACACTGAAAGTTGGACCGCCCAAAGACAATTCTT
CCAAAATTGGTGCTCTGGTCAGCAAGGAACACATGGAAAAGGtcaattgt
ttttcattttgacaATGTTCTTCTATAAAGAATACTAATACTAAACACTA
TAACTAGGTAACCTAGGAGACTCATTTTCATTCAGTTTCATTCAATTCAT
CAGTTGAGctgatattttgaatatttcaggTGAAATCATACATCAAGCTA
GCTGTCAAAGAAGGGGGCACCATATTGTGCGGTGAAACGGTCGACCCACC
TCTCCAATTGCCAGAGGAAAATTCTCAGGTTTAGTTAgtgtttcttttcc
tttttattgCTTCAAGTTATAAGTTCTTTCTTCAACTAACCGAAGTCTTG
GCGAATGGAAATGTCTACGGCACTGAGTAAGTTTTGTAATTATGACGGTA
TCGGGCTCACTGGTATGTTTCAAAATGTATGTTAAGTTTTCAAGTCGATT
TGCTAAGTCAAGTCTAAATATTATGATGTAATAAAACCCAATCACCAAAT
AGTGCTCGAGTGTTAATACGATATCAATTTACTTAAAACTCTTTCTCAGG
GATATTACTGCCAACCAACCGTTATTGTCGGGTTGAAAGATGACGCTCGC
TGCATGCAAGAAGAAATATTCGGTAAGCCATCAAACTTCAACACAACCAA
CTCAACTTTATTTGTTCTTTGTGCTTAACAATTTTGCAGGAAACCTTCTT
TCTTACCGTTGCAGGTCCAGTGGTTTGCATCGCACCTTTCACAGGGGAAG
ATGATGTGATCAAACGTGCCAACGATGTTCCTTATGGTCTCTCTGCTACA
CTCTGGACTCAAGACGTCTCAAGACTCCATCGACTCGCCCGTCAATTTGA
AGTACTTTTGTTTATCTTTCGTCGTGAAGTGCGATAAATCCCCATAGTtt
tgaagtgaatacagtcgctctcacgTTGTCCCAATGTTATCCCAATTCAC
TGTCTCTGtccagtcagtagacaagaattcacttccagctctaccAAATA
GCAATTAAGTCCTcgggttccacatggacccgtagctcaataCTAGAGCA
AATGCtcgcgaatggcatggttgtgagttcgagtctcgtcggattcgttg
gttttccaacggttctggtggctggtcagaagacaacacgagagcgactg
tattcacttcattgtaatgcATAAGGACAAAATTCACCATAGTTCTGAAA
TGATTTAATAATTGTAGTTTCAGTCAAATCGATAGTTAGTCCCAACCACA
TTAAgctctaaagtctgtccagatataattggcagtggaaacaagaatgc
ctgtaacttttgatagtcaaatataattttggaaattttttttgcttctt
ttagagaatcaaaagcgctatatttgaacggatttttggttgaaaaaatt
cgcgatttttatcggttaaatttgcgattgcaaaaattgagctttttttc
tatctatcctataacgttcatttttacaccagtggtagttcaacctttgg
ttaagaagtttgttaaatttcaaggtaaacagaaaagtccttcggaagat
atgggacccgaaataccccttggtagcacttttctgtgaaatatcaaatc
tccaacttattactaaaaacgggggttatgttatcttttttgaacagtcc
aattaaaagttggaaaatgttaagtgttggtgcattggtattattggtat
cattgattatttcgaaataaagtgaaatcacggtataattgtttttattg
aaaagataagcatgaatttatattgcctttgttattttctaattcccaaa
acactaaacacagtttggctatgaggtcattaaagagatcgtaaaatgtg
ttatgatcgaaaaactgttttataaatcatatcactacccccgtttttag
taataagttggagatttgatatttcacagaaaagtgctaccaaggggtat
ttcgggtcccatatcttctgagagacttttttgtttgccttgaaatttaa
caaacttcttaacctaaggttgaactaccactggtgtaaaaataaaagtt
atagcataagtagaaaaaaagctcaatttttacaatcgcaaatttaaccg
ataaaaatcgcgaatttttcaaccaaaaatacattcaaataaagcacttt
tgattctctgaaacaagcaaaaaaaaatttccatgattatatttgactat
caaaagttacaggcattcttgtttccactgccaattatatttggacagac
tttaggtATCCTTTTATGAATGCGttcttctttctctttcttGTAGGCAG
GGACGATTTGGTGCAATTGCTGGTTGGTACGCGATCTTCGAATGCCATTC
GGTGGCATGAAAATGTCGGGCGTCGGGAGAGAATGCCAAAAAGAATCTAT
CGAGTTCTACTCAGAAGTCAAAACCATCTGTGTGCAATACGCCTCTTAA Coding sequence (CDS) from alignment at sc0000390_pilon:66606..72604+ >XLOC_011134 ID=XLOC_011134|Name=XLOC_011134|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2916bp|location=Sequence derived from alignment at sc0000390_pilon:66606..72604+ (Clytia hemisphaerica_ch_hm2_pilon)
ATgataaaagtagaaaatttcattGGTGGAAAGTTCACACCATGTTCAAA
ACACATCGATAGTTTCAATCCGTCAAATGGGCAAGTACACGCCTGCATCC
CTGACAGCTCGTCTGATGACGTTGAACAGGCTGTAGAAGCAGCTCAAAAA
GCTCTGCCTGGATgataaaagtagaaaatttcattGGTGGAAAGTTCACA
CCATGTTCAAAACACATCGATAGTTTCAATCCGTCAAATGGGCAAGTACA
CGCCTGCATCCCTGACAGCTCGTCTGATGACGTTGAACAGGCTGTAGAAG
CAGCTCAAAAAGCTCTGCCTGGATGGAGTGGTTTATCGACACGTGAACGA
TCTAAAGTCATGATGAAAATTGCGGACCTAGTGGAACAACGCCTGGATGA
ATTTGCAGTAGCGGAGTCCACTGACCAAGGGAAGCCAGTGTGGTTGGCAA
AAGCTGTCGATATTCCTCGAACAATTCTCAATTTCCGATTCTTCGCCACC
GCCATTCTTCATCAAATGAATGAATGGAGTGGTTTATCGACACGTGAACG
ATCTAAAGTCATGATGAAAATTGCGGACCTAGTGGAACAACGCCTGGATG
AATTTGCAGTAGCGGAGTCCACTGACCAAGGGAAGCCAGTGTGGTTGGCA
AAAGCTGTCGATATTCCTCGAACAATTCTCAATTTCCGATTCTTCGCCAC
CGCCATTCTTCATCAAATGAATGAGTCGACTGAACAATCAGAGTTTGGGG
CGGTGAATTACACAGTGCGTTGTGCTGCAGGTATAGCAGGTCTCATCACA
CCATGGAACCTTCCCTTATATCTTTTATCCTTCAAGGTGGCGCCTGCGAT
TGGTGCTGGATGTTGTGTGGTGGTGAAACCAAGTGAAATGACCTCAGTGA
CTGCTTGGATGCTCTGTCAGGTCTTCCAAGAAGCTGGTCGACTGAACAAT
CAGAGTTTGGGGCGGTGAATTACACAGTGCGTTGTGCTGCAGGTATAGCA
GGTCTCATCACACCATGGAACCTTCCCTTATATCTTTTATCCTTCAAGGT
GGCGCCTGCGATTGGTGCTGGATGTTGTGTGGTGGTGAAACCAAGTGAAA
TGACCTCAGTGACTGCTTGGATGCTCTGTCAGGTCTTCCAAGAAGCTGGT
TTACCAGAAGGTGTAGTGAACATGGTGTTTGGAACTGGAAAGAACGCAGG
AGCCGCAATCGTTCAACATCCGAAGATTAACCTACTCTCCTTCACTGGCT
CCACTGCTGTCGGCAAATACATTCAAGAGAAAAGTGCTCAACACATGAAA
AAGCTCTCATTAGAGGTTTACCAGAAGGTGTAGTGAACATGGTGTTTGGA
ACTGGAAAGAACGCAGGAGCCGCAATCGTTCAACATCCGAAGATTAACCT
ACTCTCCTTCACTGGCTCCACTGCTGTCGGCAAATACATTCAAGAGAAAA
GTGCTCAACACATGAAAAAGCTCTCATTAGAGCTTGGTGGGAAGAACGCG
GGAGTCATTTTCGCCGACGCCAACTTGGATAAATGTATCCCAACTTCAGT
AAGCTTGGTGGGAAGAACGCGGGAGTCATTTTCGCCGACGCCAACTTGGA
TAAATGTATCCCAACTTCAGTAAGGTCGGCTTTCGCGAACCAAGGAGAGA
TTTGTTTGTGCACAAGTCGCTTGTTTGTTCATCAAGATATTTTTGACGAG
TTCTGCAAACGTTACGTTGAAACTGTCCGGTCGGCTTTCGCGAACCAAGG
AGAGATTTGTTTGTGCACAAGTCGCTTGTTTGTTCATCAAGATATTTTTG
ACGAGTTCTGCAAACGTTACGTTGAAACTGTCCGATCTACACTGAAAGTT
GGACCGCCCAAAGACAATTCTTCCAAAATTGGTGCTCTGGTCAGCAAGGA
ACACATGGAAAAGATCTACACTGAAAGTTGGACCGCCCAAAGACAATTCT
TCCAAAATTGGTGCTCTGGTCAGCAAGGAACACATGGAAAAGgTGAAATC
ATACATCAAGCTAGCTGTCAAAGAAGGGGGCACCATATTGTGCGGTGAAA
CGGTCGACCCACCTCTCCAATTGCCAGAGGAAAATTCTCAGgTGAAATCA
TACATCAAGCTAGCTGTCAAAGAAGGGGGCACCATATTGTGCGGTGAAAC
GGTCGACCCACCTCTCCAATTGCCAGAGGAAAATTCTCAGGGATATTACT
GCCAACCAACCGTTATTGTCGGGTTGAAAGATGACGCTCGCTGCATGCAA
GAAGAAATATTCGGGATATTACTGCCAACCAACCGTTATTGTCGGGTTGA
AAGATGACGCTCGCTGCATGCAAGAAGAAATATTCGGTCCAGTGGTTTGC
ATCGCACCTTTCACAGGGGAAGATGATGTGATCAAACGTGCCAACGATGT
TCCTTATGGTCTCTCTGCTACACTCTGGACTCAAGACGTCTCAAGACTCC
ATCGACTCGCCCGTCAATTTGAAGTCCAGTGGTTTGCATCGCACCTTTCA
CAGGGGAAGATGATGTGATCAAACGTGCCAACGATGTTCCTTATGGTCTC
TCTGCTACACTCTGGACTCAAGACGTCTCAAGACTCCATCGACTCGCCCG
TCAATTTGAAGCAGGGACGATTTGGTGCAATTGCTGGTTGGTACGCGATC
TTCGAATGCCATTCGGTGGCATGAAAATGTCGGGCGTCGGGAGAGAATGC
CAAAAAGAATCTATCGAGTTCTACTCAGAAGTCAAAACCATCTGTGTGCA
ATACGCCTCTTAAGCAGGGACGATTTGGTGCAATTGCTGGTTGGTACGCG
ATCTTCGAATGCCATTCGGTGGCATGAAAATGTCGGGCGTCGGGAGAGAA
TGCCAAAAAGAATCTATCGAGTTCTACTCAGAAGTCAAAACCATCTGTGT
GCAATACGCCTCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000390_pilon | genome | sc0000390_pilon:66606..72604 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1306-1458:5847 |
| Aaloc | 1171-1305:4267 |
| Aaloc | 1096-1167:4100 |
| Aaloc | 997-1095:3730 |
| Aaloc | 919-996:3514 |
| Aaloc | 814-915:2195 |
| Aaloc | 742-810:1476 |
| Aaloc | 577-741:1145 |
| Aaloc | 364-573:705 |
| Aaloc | 163-360:304 |
| Aaloc | 1-159:1 |
|
