XLOC_027394.4 (mRNA) -

Overview
NameXLOC_027394.4
Unique NameXLOC_027394.4
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000366_pilon:67382..68031-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027394.4 ID=XLOC_027394.4|Name=XLOC_027394.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=650bp|location=Sequence derived from alignment at sc0000366_pilon:67382..68031- (Clytia hemisphaerica_ch_hm2_pilon)
AAGATTTGCTCCAACCCCGAAGAATACAACCAATCCCTCCTCCAAATGAA
AGATGCATTCATCAGAAGAGGATACAAAGCTGAAAACCTCAATAAACAGT
TCGACAAAGTTAAGATTAAGAACCGGGAAGATCTCCTAAAATACAACAAC
ACCAAGAATAAACAACAAATCGCCTTCATCACTACCTTCAACAAAAACTT
ACCACCTATCCGTACCTTACTGGAAAAGCACTGGGATATCCTAAACATCA
ACGAACGGTTTCAAGATACCTTCCAACAAACACCAGTCATTGCGTATAGA
CGCAACAAAAACTTGAAAGATCTACTTGGACAAACATCAATATCCAACAA
CAAAGTCTCAAGAAAACAACAAAAACTGAAAGGAAAGTGCCAGCCTTGCT
TAACAAGGACAGGAAACCTTTGCTGTAAACAAATAATGTCAACCTCAACC
TTCACCAGTCAACAAACCAAAAGGACGTACCAGATCTTCCACAACGTTAA
CTGCAAAAGCACTCGCATCATCTACCTCCTGGAATGCAACAAATGTCACA
TCCAATATATTGGAAAAAGCGAGACCCAATTCAATCAAAGACTCAATAAC
CATAGAAGTAATGCATACAGACCACGACAAGAGACAATCCCAGCGTGTAA

Coding sequence (CDS) from alignment at sc0000366_pilon:67382..68031-

>XLOC_027394.4 ID=XLOC_027394.4|Name=XLOC_027394.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1300bp|location=Sequence derived from alignment at sc0000366_pilon:67382..68031- (Clytia hemisphaerica_ch_hm2_pilon)
AAGATTTGCTCCAACCCCGAAGAATACAACCAATCCCTCCTCCAAATGAA
AGATGCATTCATCAGAAGAGGATACAAAGCTGAAAACCTCAATAAACAGT
TCGACAAAGTTAAGATTAAGAACCGGGAAGATCTCCTAAAATACAACAAC
ACCAAGAATAAACAACAAATCGCCTTCATCACTACCTTCAACAAAAACTT
ACCACCTATCCGTACCTTACTGGAAAAGCACTGGGATATCCTAAACATCA
ACGAACGGTTTCAAGATACCTTCCAACAAACACCAGTCATTGCGTATAGA
CGCAACAAAAACTTGAAAGATCTACTTGGACAAACATCAATATCCAACAA
CAAAGTCTCAAGAAAACAACAAAAACTGAAAGGAAAGTGCCAGCCTTGCT
TAACAAGGACAGGAAACCTTTGCTGTAAACAAATAATGTCAACCTCAACC
TTCACCAGTCAACAAACCAAAAGGACGTACCAGATCTTCCACAACGTTAA
CTGCAAAAGCACTCGCATCATCTACCTCCTGGAATGCAACAAATGTCACA
TCCAATATATTGGAAAAAGCGAGACCCAATTCAATCAAAGACTCAATAAC
CATAGAAGTAATGCATACAGACCACGACAAGAGACAATCCCAGCGTGTAA
AAGATTTGCTCCAACCCCGAAGAATACAACCAATCCCTCCTCCAAATGAA
AGATGCATTCATCAGAAGAGGATACAAAGCTGAAAACCTCAATAAACAGT
TCGACAAAGTTAAGATTAAGAACCGGGAAGATCTCCTAAAATACAACAAC
ACCAAGAATAAACAACAAATCGCCTTCATCACTACCTTCAACAAAAACTT
ACCACCTATCCGTACCTTACTGGAAAAGCACTGGGATATCCTAAACATCA
ACGAACGGTTTCAAGATACCTTCCAACAAACACCAGTCATTGCGTATAGA
CGCAACAAAAACTTGAAAGATCTACTTGGACAAACATCAATATCCAACAA
CAAAGTCTCAAGAAAACAACAAAAACTGAAAGGAAAGTGCCAGCCTTGCT
TAACAAGGACAGGAAACCTTTGCTGTAAACAAATAATGTCAACCTCAACC
TTCACCAGTCAACAAACCAAAAGGACGTACCAGATCTTCCACAACGTTAA
CTGCAAAAGCACTCGCATCATCTACCTCCTGGAATGCAACAAATGTCACA
TCCAATATATTGGAAAAAGCGAGACCCAATTCAATCAAAGACTCAATAAC
CATAGAAGTAATGCATACAGACCACGACAAGAGACAATCCCAGCGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027394.4XLOC_027394.4-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000366_pilongenomesc0000366_pilon:67382..68031 -
Properties
Property NameValue
Aaloc613-648:37
Aaloc4-612:651