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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:292697..294887- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_028173 ID=XLOC_028173|Name=XLOC_028173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2191bp|location=Sequence derived from alignment at sc0000168_pilon:292697..294887- (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTGTAATGACGACTACTTGTTCAAATCGAATAATAGTGTGGAGAAC
GGCAGAACAACCAGATCAATATTTGATCGAACATTTAGTTGATTCAACGT
TAGAAAAATGTCACAATGAATTGGTGTGTCATATTAAGGAAAATCAGGGT
GATGCTTCATTGAAAGGGAATTCCCTGAGTGAAGGTAGTTCTCGCCGAAA
GAAAATTTCCCTGAAAAATAAAGGAGATTCCTTGAGCAGAAATAAGAAAC
AAGATTCCCTGAGAATTAGACCTGAAGGTGATTCCCTGCTTGAAGAAAAT
GCTGATGTAAAAGAACCCTGCAAATGCAAGACATCAAATGAGACGTTTTA
TGCAAGAGAGATTGGTTGCAAGTATGGCTTTGATCAAGGTACTTCAGAGG
AACTCTTAACTTTATCTACATAATTAGAAATTAGATATTCTTTTCCACGA
CATACTGTCAGATAGGTGAAGAAACAGGTGTCAAAGACCTCACGCTCGAC
TTTTCTAATCAATTACTGAAACTAAACGAGCTAAACAAACTAGCACGGAT
GATATAAAACCATTATTTGAGAATGGGTACTTTCTCTACAATTCAAGCTT
TGACCGGGATGTTTGGTCATTTCCAACCACAACCACAACCACATAATTTG
CTGTTTTCATTCAGCCAGCCAAAGCAAAGAATATTTTAAAGTCTGTTTCA
AGAGTGGACACTTTACCTCAATTACACCACATCTTGACATCTATTACTCA
TTCACAGTTATTATAGGCGATGAAAAGGCGAAGAAGAAGAAACTTATAGT
GGTGCATATAGTTTACAAGGAGAAACTGTTAGAAATAGTAAAGTTTCCAC
ATTTCCACTTTTAAGACAGACTTTGCTAACAAATATGAACCTTAAATCAA
GTTAGAACTTAATCGATATCTCGAATTCTTTAATTATTTTCATATCGATT
TTGTATTTCAGCCTGTCCTTTCTGCTTCTCCACAAGCCCAACACAACCCA
TCATGCTCAATTTGATGCAGAATACCAAAAACTTACCAGTAGGGCGGTTG
ATGAGGTGCAAAGGCGGTGCACCCATCCCACCTGTACGAATACTTACAGA
AAAAGGTATATAAACAATTATCAACTCTTACACCAAAATTACGCTTTGGG
TTCAAGCTAACCAGAGTCCAATCATTAATATTTGAACCCTCATCGGGCCC
TCATGTTATATCCACCAACTTTAATAGGTGTTTTTGAAAATGGTACCCTA
ATGGTAGACTTATCAGGTTTACATCAAATTTATTTTTTAACATGAACTAT
ATGCTTTCATTAGACACCCCTGCATCAGTACAACCATCAGTACAATCGGG
ATATTTGAGAAAAGAAGTTTTATTTTGAAGGATCCCAGCTAAGATTGGGT
CGTTTGAAGGACAATTTTTTTCTAATTCATATATAACCATATTTCCCCTT
TAATTCTCAATTTTTCCAGAACTAGATGAGTCGACGGAAGGTGAATCTGA
AAATTGCAAAGTCAGCGAAATTGAATACGAAAATATCGACGTTAACGAAT
ATTCAAAATGGCGTGTGCTAAATACGATTAAATCAAAGTTCAAATTTGAT
ATTCAAGGTAATATTCTGAAGGTAGGTTCAATTGGTTCAGAGTTGAAAAT
TTAGCACTATCCATTTATCTTTTTCTAATTATTAACGCGAATATTAAGAA
AATGCTAAAATATTTTCAATCGATCTTTTCACGCGTAGCTTCCAAAATAA
TTACTTATAGACCTTTTCAAACAATACGTCACGAGCAACGCTTACCTCGT
TTTCAACTATTGCTATGGTAATTGAGTTTATAAGAAGTTTACTCTATTAT
TAACAAAGGCAAATTTGAAAACTCGATGGATTCAATCACCTTGGTAATGG
TTTCGAAACGAGGCAGTCGTTGCACTTGGAAGCATATCTAGGCTCAGATA
TGGGAAAATTAAGCATATGGCAAGCATTACTTGAGCCTATTCGTAATTTA
TAAAAACTACGGTGCCCTGAGTGTTTAGTCATCAAGGTACAAAAATTACT
TTCCAATTTCTATTTCTTTAGTGGACTGGAAACACGTGTGAGCTGCAATC
TTTGAGCGGCCTCGTTTTGAAGATAAAGATAAAGTGTGCCAACGAAATGG
AGCCTATTTGTATCATCATTAAAACAGAAGGAAAAAGTACA Coding sequence (CDS) from alignment at sc0000168_pilon:292697..294887- >XLOC_028173 ID=XLOC_028173|Name=XLOC_028173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1524bp|location=Sequence derived from alignment at sc0000168_pilon:292697..294887- (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTGTAATGACGACTACTTGTTCAAATCGAATAATAGTGTGGAGAAC
GGCAGAACAACCAGATCAATATTTGATCGAACATTTAGTTGATTCAACGT
TAGAAAAATGTCACAATGAATTGGTGTGTCATATTAAGGAAAATCAGGGT
GATGCTTCATTGAAAGGGAATTCCCTGAGTGAAGACTGGTGTAATGACGA
CTACTTGTTCAAATCGAATAATAGTGTGGAGAACGGCAGAACAACCAGAT
CAATATTTGATCGAACATTTAGTTGATTCAACGTTAGAAAAATGTCACAA
TGAATTGGTGTGTCATATTAAGGAAAATCAGGGTGATGCTTCATTGAAAG
GGAATTCCCTGAGTGAAGATTCCTTGAGCAGAAATAAGAAACAAGATTCC
CTGAGAATTAGACCTGAAGGTGATTCCCTGCTTGAAGAAAATGCTGATGT
AAAAGAACCCTGCAAATGCAAGACATCAAATGAGACGTTTTATGCAAGAG
AGATTGGTTGCAAGTATGGCTTTGATCAAGATTCCTTGAGCAGAAATAAG
AAACAAGATTCCCTGAGAATTAGACCTGAAGGTGATTCCCTGCTTGAAGA
AAATGCTGATGTAAAAGAACCCTGCAAATGCAAGACATCAAATGAGACGT
TTTATGCAAGAGAGATTGGTTGCAAGTATGGCTTTGATCAAGCCTGTCCT
TTCTGCTTCTCCACAAGCCCAACACAACCCATCATGCTCAATTTGATGCA
GAATACCAAAAACTTACCAGTAGGGCGGTTGATGAGGTGCAAAGGCGGTG
CACCCATCCCACCTGTACGAATACTTACAGAAAAAGCCTGTCCTTTCTGC
TTCTCCACAAGCCCAACACAACCCATCATGCTCAATTTGATGCAGAATAC
CAAAAACTTACCAGTAGGGCGGTTGATGAGGTGCAAAGGCGGTGCACCCA
TCCCACCTGTACGAATACTTACAGAAAAAGAACTAGATGAGTCGACGGAA
GGTGAATCTGAAAATTGCAAAGTCAGCGAAATTGAATACGAAAATATCGA
CGTTAACGAATATTCAAAATGGCGTGTGCTAAATACGATTAAATCAAAGT
TCAAATTTGATATTCAAGGTAATATTCTGAAGAACTAGATGAGTCGACGG
AAGGTGAATCTGAAAATTGCAAAGTCAGCGAAATTGAATACGAAAATATC
GACGTTAACGAATATTCAAAATGGCGTGTGCTAAATACGATTAAATCAAA
GTTCAAATTTGATATTCAAGGTAATATTCTGAAGTGGACTGGAAACACGT
GTGAGCTGCAATCTTTGAGCGGCCTCGTTTTGAAGATAAAGATAAAGTGT
GCCAACGAAATGGAGCCTATTTGTATCATCATTAAAACAGAAGGAAAAAG
TACATGGACTGGAAACACGTGTGAGCTGCAATCTTTGAGCGGCCTCGTTT
TGAAGATAAAGATAAAGTGTGCCAACGAAATGGAGCCTATTTGTATCATC
ATTAAAACAGAAGGAAAAAGTACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:292697..294887 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 643-762:121 |
| Aaloc | 493-642:721 |
| Aaloc | 349-489:1229 |
| Aaloc | 187-345:1964 |
| Aaloc | 1-183:2192 |
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