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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000416_pilon:23397..28817+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042718 ID=XLOC_042718|Name=XLOC_042718|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5421bp|location=Sequence derived from alignment at sc0000416_pilon:23397..28817+ (Clytia hemisphaerica_ch_hm2_pilon) GTCATGGCGACGACATCTTCGTCTCTCGAGCAGTATTTAAATGCTTTGTC
GCCCAAAAGCATCAATTACACGAAATGCACTCCAGCTACTTCCATTTACC
ATAAAATCTCACAACAGCCTCACAAGAAGAGACGTCTCGATCACCAAGAC
AAACAATGGTTCAATCTTGGTAACGGCCAAACATTCAATGACCCAATCAC
TGCTGCTGAATATCTTCTTGAAAGAGAATATGGTgagagttttcttttca
aacccAACCAACGACGTCCTGTTATCATTCCATCAGAATTCATGTCCAAT
CAATATCACAATGAGTCGAAAAGCGCTGTTTTAGATTTCAACATTGAACA
GACGGTGAAACAAACTCTTATTGATCTGCAGAAAAATCGTCCAAACTTCT
GGTTTACTGGTGAACTTGAAGCTTTTCTCCAAGCACACCCAATGAATCCT
GAAATCAACCAAAAAGAATTTGAGAGTTGGATCATCAAAGTCAAAGCAAT
TTATCTGATGAGGAAAGAGATCAAGCCTGAGGAAATACCACAGAATTTAC
CAATGATAAAACCTTCTGACTTCGTCAACATTTGCATCACCGAGTTGAAA
AAGAGTGCTCAAACATCTAGCTTAATAAATGGTTTCTCTGGTAGAAAAAG
TTTCAAGTACATCGCCAAAGAAGTAGTACGCTCGCCTCCACAAGACAGAA
CTGTGAAGTGGTTCTTTGATTTGCAGATATCTGACCGTGGAGAAAGTGCG
GAGCGGTCATTCTTCGACGAGCTGTATTCGTTAAAAGACGATGATATCCT
CAAAGATACAGTCATTTTATCTTCTTTGAACTTCTTGACTGATCTAGATA
ATAAAGAACATCAGGAATTCGATTTCCTCATCTTTTCGTGGAAACGAAAG
CTGATCATTGGAGTGGAAGCTAAACGACAACTCACCAATACCACAGCGTT
CAAACAACTCGATAAATACCGTTCTATATTCGAGGAGAAACTGGGCGATC
AACTCGGACCTGGTTGGACTTTCTACCCAGGAGTTTTTGTGGAAAAGAAA
GACAGTTCTTTGTCGACCACTTCCTCAAATAATCACTTTATCGATATGGA
TACTGACATTTATACCTGGATCTCGTCTGTTTTCAATTCATTCCCAGAAA
ACGTGAATGGTCAGTCGTTGGAGCAGTTGAAAAAAGTCCTTCAGATTATC
ATTTTCACCGTTCACATGTCCACCAAGGATAAGCCACGACTGGTAACCTC
TTCCTATTGGGTGGACTACATTTCTGATGTCATCGATTCCCTCTCCAGTA
CCCAAAACATCGTGTTTTATTCCCAACAGCAGCTCCCTTTGATGATTACA
AATGATCCTAAATACAATAAAGTTATCTTTATGGCTGGTTTTGGCACGGG
CAAGACATTTTTGCTTGAAGAAAAGGCGATTACGCTGAGTGAACAAGCAG
GATACCGAGGTGGAGTGTGTTATGTGGTTTGTAACGGGATGAGTCTGCAT
TATTATGAAAGGAAGCTCAAGTTGGAACAACATGGAATCAAAGTTGTATA
CGAAATTGTAAGTATACATAGAATCTAATTTTTCACATATTATTCTCGAA
TGGTAATTAATGTCTGTGTCAAAAAGGTgtgcagtgtttttatttttggc
cataactttccaaacagtttggtaataataataatatttctcttttatca
cccctTTTGAGGTATATCTAAAAATATCTACAAAACCGTATATACATTTA
AAAAGCTGTCACCGTAAATGGTCTGTATAAATATACGAAATTTTTCTCCC
GTTATGAGACGGCCCctggttgaaaaaataaaagatacaGAAGGAATTTA
GTTGAAGTTGGGAGATTAATAGAGCCTGAACTACACAAAAGACCAAGAAT
TTGAAAAGAGGTTTAGCGAACTAGCAAAGGGCTAGGCACATTTATCCTTC
TTCCTAGGAGTATTGTCTCGGAAGGAAATAACTAGTCTAGGGAGAAAACA
caatatgaaatatataaatgAATATTAATGGAACTAATAAAGATTCAGTT
ATAAGAATACTTAAAAGGGCCTAAAAAATTGACTAAGTCATAAGAATACT
GAAAAGGgcctaaaaaaaaattgactaagtttgtcaaagttagaagctga
agtTTAGTTgtttaaatatcaaaaatgttggaaagatatttaaatGCCCT
TATATTTCTAGTActtagtttttcaaaattcatgcaagaaattgtaagtt
ttttcttttactcATGACAACCTGTCGTCAGCCCGGCCtgcaaatcaatc
aaaatactttttggacctatctGGAGGtcctaaaaataattttttataaa
aaatctttctggccgaaaatgccggaagttTGCCAGAGAAGccgtttttt
ttgcattttctcgagatttcatcatttgtttttttccgatttctaaaaat
cgccggaacattCGAGAATCGCCGGAAGAACGGTTTGTCTTGAATTTTTC
GAGctatactttatattttttcatgaaattttgcgcaCCGATGCAAagtg
gcaatacctaaaatgtgaaggagtctgatttttgagaaaaaaaattttcg
gccaaaaatgccggaaaaaccggggtttttttcattttctcgatttttca
tcattagtttttttcttaagttttgcacaaagatgtaaaTTAGCAATGCC
TTACATACCAACATTACAAAAAATTGCTCAACTTTATACAGTACCgcaag
tggattaattttgctGGAAATTAAATCTGGCAGATTTCGGTAAATTAAAT
CCTCGCTAAAATTTTCATCGTCGCCAAAGTTTAGGAATAAAACAATGTAT
GAAAATTATCACTTTTGCGTTGATTTCATGCATTTGCATTTTTCATGAAT
TCTTGTTCCTCCAATTTCCAAAtgcgccaaattaaatccttgtCAAAAGT
CGTATTTTGGTCATTCGTGAAATTTGATCCATGCAATAATGTATCCACTT
gaggataaaatgaaaatgcaCATCTCCGAATATCTTGAGGAACGAgcata
aataattttttctttcgggCTTTTCGGGTCAGAACTTTGTGTCCATTTGC
CGACATGCCTTTATTGCATTACCTTTGCGCAGCACCATCCGAATTTTTGT
TACTTTAGTGCGCTGGAATGTTGagcaatttttttgtgaaattgagcCCA
AGCACACAAATGTATTAGCAATGATAATGCCCAATgatattttgcgtttt
tggacctaccccagtggaggtcctttaaattaatcgttgttcgttcgttc
gtaaTGAGTTTTTCTccagattggctcattcaatttttccgATATTTTGC
GCaaagaatcaaaatgataaaccctcgaatgttttgaatcatttctgatt
tttttgcatgaagacAGAGCACCATCATAAGGAAGAAATGGTCGAAGTAG
ATTTtcgtagaaaaaaattttcggctcagaaaatgaatttctagctataa
gaatcactattttatAAACTGGGCTAAATTcttaatttatttataagcac
attcgaaaaaaacattttactggCATGAAGAGCTTAAAAATTGTCATATT
CCGCTGAAATACAGTGTCCTTTTTGCTGGGATGAATTTTTACAAGTCTAC
TTTTCATTATTTggaaagatgcaaaatggtcaATCCcggaatgtgacgga
gcccgattttcgaaaaaaaatttggtccatttgggccaaaatatgcccaa
tatgtgttttttttcgagattttatcattcgAATCAAAAGATTGCCTAAA
AGTCCTAAATTACTTGTATACAACTAAATAAATTACCTTTTTACGCAAAC
AAACcctattattttttattttgatcagTTATGTCtaatgtgtttcattg
ttttaatgttcattgattatttttgataaccaggtaggaccataaaagta
tcgcttgtttattttcaattgttttcttttgtagGAAGACTTACTCGACA
AAACATCTCATGGTATATCTCATATCAAAGCTATCTTCTTCGATGAATTT
GATACTGTTCCGATAGACATTTTCAATGAATTGAAAACGCGTCTTTTGAC
TGAAATTCCAGTCTGTTGGGTCGCCCCGAATTGTTCGTATCgagtgaact
atgaactttcctCCATCAATAACGAGATTTGGGTTGACTTTCAATCTGTC
AGTTTAAATTTGAATCTTAGAAACACGAAAGAAATTGCAAATAAAGCGTT
AAGCGTTGGTGAACAAAAGATTTATCGATATGCAGATGGCTTGTCGAGCC
CACCTCTAAATTTTCCCAACGGTCCCAGTCCTACATATGCAGCCTCCATT
GATGATGCAATAAAGAAAGTTCGTGCGATAACAAAGAAGGGAATTCTGTT
GGTCACAGATAACTATGCATTTAACTTAAAGATAGATGAAAAAGTCAGAT
TTCATGATAAGTACCCGCCCCATAGAAAAGACAGCCCAATAGATTTCTTG
AAGAAGGGGGGCATTTTGGTCGCATCACGAGATGACATATCGGGTTTCGA
ATGGCCTGTGGTGATTTACCAGCTCAATAAAACAGACGAAGAAGATATAG
ATATAGAGCGACACGAATGCAATATGATATCCAGATGCACGTCCTTACTT
TATATTGTTGGCGAAGAAAATAATACAAATATCAATTATTTTCCTTATAA
CAAAATTCTTAAGATGCTGGAGCTCTTGACAGCAGATAATACCATTACTA
ATCAATTCAAGCGTAGTACCAGGCATTACGTCTTCGATCACCTCCATAGA
TTCAATCGACGCGAGTGGCTGCAAGAACTTCAACCCATTTTAAAAGAAAC
AATTGAACAGATATCTCAAGTTAAAACCATCACTTTCTCGATGTTGGAAA
AACTTTTGCTTTTTCTTATTCAAGACGTTTTTAGAGATCAGGAGGCCGCA
TGGTTTTCTGTTCCCTGTGCGATGAGTTTGCTGTTCGTGAAGTTTATCGA
TGAGACCGTTTCTTTTGACGAATGGCTCAGCAAGTGCGTCAATATTAAAT
TCTTTTCCATGCTTGACAGTCATACTTTGCTTACAAGGCTATCCGGAATA
TCCCCTGAAGGCAAAACAACAATGTGGAAatactttgaaattgaaaactt
gCCTGAAGTGCACCTACCcgaagtcaaaattttgaagattttaaaatcag
acagtGAAAATTTAAAACTGTTCAAATTTGTTCTCACAAATTACGTCTTC
GATCACCTTGAACGTTTTAATCGACGCTGGTGGCTGCAAGAACTTCAACC
CGTTTTGAAAGAAACAATCGAACAAATTTCTCAAGCTAAAAACGATACCA
TCACCTTTTCGTTGTTGGAAAAACTTTTGCTTTTCCTTATCAAAGATCTT
ACCGATTTTAACCATGCGCCG Coding sequence (CDS) from alignment at sc0000416_pilon:23397..28817+ >XLOC_042718 ID=XLOC_042718|Name=XLOC_042718|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5988bp|location=Sequence derived from alignment at sc0000416_pilon:23397..28817+ (Clytia hemisphaerica_ch_hm2_pilon) GTCATGGCGACGACATCTTCGTCTCTCGAGCAGTATTTAAATGCTTTGTC GCCCAAAAGCATCAATTACACGAAATGCACTCCAGCTACTTCCATTTACC ATAAAATCTCACAACAGCCTCACAAGAAGAGACGTCTCGATCACCAAGAC AAACAATGGTTCAATCTTGGTAACGGCCAAACATTCAATGACCCAATCAC TGCTGCTGAATATCTTCTTGAAAGAGAATATGGTgagagttttcttttca aacccAACCAACGACGTCCTGTTATCATTCCATCAGAATTCATGTCCAAT CAATATCACAATGAGTCGAAAAGCGCTGTTTTAGATTTCAACATTGAACA GACGGTGAAACAAACTCTTATTGATCTGCAGAAAAATCGTCCAAACTTCT GGTTTACTGGTGAACTTGAAGCTTTTCTCCAAGCACACCCAATGAATCCT GAAATCAACCAAAAAGAATTTGAGAGTTGGATCATCAAAGTCAAAGCAAT TTATCTGATGAGGAAAGAGATCAAGCCTGAGGAAATACCACAGAATTTAC CAATGATAAAACCTTCTGACTTCGTCAACATTTGCATCACCGAGTTGAAA AAGAGTGCTCAAACATCTAGCTTAATAAATGGTTTCTCTGGTAGAAAAAG TTTCAAGTACATCGCCAAAGAAGTAGTACGCTCGCCTCCACAAGACAGAA CTGTGAAGTGGTTCTTTGATTTGCAGATATCTGACCGTGGAGAAAGTGCG GAGCGGTCATTCTTCGACGAGCTGTATTCGTTAAAAGACGATGATATCCT CAAAGATACAGTCATTTTATCTTCTTTGAACTTCTTGACTGATCTAGATA ATAAAGAACATCAGGAATTCGATTTCCTCATCTTTTCGTGGAAACGAAAG CTGATCATTGGAGTGGAAGCTAAACGACAACTCACCAATACCACAGCGTT CAAACAACTCGATAAATACCGTTCTATATTCGAGGAGAAACTGGGCGATC AACTCGGACCTGGTTGGACTTTCTACCCAGGAGTTTTTGTGGAAAAGAAA GACAGTTCTTTGTCGACCACTTCCTCAAATAATCACTTTATCGATATGGA TACTGACATTTATACCTGGATCTCGTCTGTTTTCAATTCATTCCCAGAAA ACGTGAATGGTCAGTCGTTGGAGCAGTTGAAAAAAGTCCTTCAGATTATC ATTTTCACCGTTCACATGTCCACCAAGGATAAGCCACGACTGGTAACCTC TTCCTATTGGGTGGACTACATTTCTGATGTCATCGATTCCCTCTCCAGTA CCCAAAACATCGTGTTTTATTCCCAACAGCAGCTCCCTTTGATGATTACA AATGATCCTAAATACAATAAAGTTATCTTTATGGCTGGTTTTGGCACGGG CAAGACATTTTTGCTTGAAGAAAAGGCGATTACGCTGAGTGAACAAGCAG GATACCGAGGTGGAGTGTGTTATGTGGTTTGTAACGGGATGAGTCTGCAT TATTATGAAAGGAAGCTCAAGTTGGAACAACATGGAATCAAAGTTGTATA CGAAATTGTCATGGCGACGACATCTTCGTCTCTCGAGCAGTATTTAAATG CTTTGTCGCCCAAAAGCATCAATTACACGAAATGCACTCCAGCTACTTCC ATTTACCATAAAATCTCACAACAGCCTCACAAGAAGAGACGTCTCGATCA CCAAGACAAACAATGGTTCAATCTTGGTAACGGCCAAACATTCAATGACC CAATCACTGCTGCTGAATATCTTCTTGAAAGAGAATATGGTgagagtttt cttttcaaacccAACCAACGACGTCCTGTTATCATTCCATCAGAATTCAT GTCCAATCAATATCACAATGAGTCGAAAAGCGCTGTTTTAGATTTCAACA TTGAACAGACGGTGAAACAAACTCTTATTGATCTGCAGAAAAATCGTCCA AACTTCTGGTTTACTGGTGAACTTGAAGCTTTTCTCCAAGCACACCCAAT GAATCCTGAAATCAACCAAAAAGAATTTGAGAGTTGGATCATCAAAGTCA AAGCAATTTATCTGATGAGGAAAGAGATCAAGCCTGAGGAAATACCACAG AATTTACCAATGATAAAACCTTCTGACTTCGTCAACATTTGCATCACCGA GTTGAAAAAGAGTGCTCAAACATCTAGCTTAATAAATGGTTTCTCTGGTA GAAAAAGTTTCAAGTACATCGCCAAAGAAGTAGTACGCTCGCCTCCACAA GACAGAACTGTGAAGTGGTTCTTTGATTTGCAGATATCTGACCGTGGAGA AAGTGCGGAGCGGTCATTCTTCGACGAGCTGTATTCGTTAAAAGACGATG ATATCCTCAAAGATACAGTCATTTTATCTTCTTTGAACTTCTTGACTGAT CTAGATAATAAAGAACATCAGGAATTCGATTTCCTCATCTTTTCGTGGAA ACGAAAGCTGATCATTGGAGTGGAAGCTAAACGACAACTCACCAATACCA CAGCGTTCAAACAACTCGATAAATACCGTTCTATATTCGAGGAGAAACTG GGCGATCAACTCGGACCTGGTTGGACTTTCTACCCAGGAGTTTTTGTGGA AAAGAAAGACAGTTCTTTGTCGACCACTTCCTCAAATAATCACTTTATCG ATATGGATACTGACATTTATACCTGGATCTCGTCTGTTTTCAATTCATTC CCAGAAAACGTGAATGGTCAGTCGTTGGAGCAGTTGAAAAAAGTCCTTCA GATTATCATTTTCACCGTTCACATGTCCACCAAGGATAAGCCACGACTGG TAACCTCTTCCTATTGGGTGGACTACATTTCTGATGTCATCGATTCCCTC TCCAGTACCCAAAACATCGTGTTTTATTCCCAACAGCAGCTCCCTTTGAT GATTACAAATGATCCTAAATACAATAAAGTTATCTTTATGGCTGGTTTTG GCACGGGCAAGACATTTTTGCTTGAAGAAAAGGCGATTACGCTGAGTGAA CAAGCAGGATACCGAGGTGGAGTGTGTTATGTGGTTTGTAACGGGATGAG TCTGCATTATTATGAAAGGAAGCTCAAGTTGGAACAACATGGAATCAAAG TTGTATACGAAATTGAAGACTTACTCGACAAAACATCTCATGGTATATCT CATATCAAAGCTATCTTCTTCGATGAATTTGATACTGTTCCGATAGACAT TTTCAATGAATTGAAAACGCGTCTTTTGACTGAAATTCCAGTCTGTTGGG TCGCCCCGAATTGTTCGTATCgagtgaactatgaactttcctCCATCAAT AACGAGATTTGGGTTGACTTTCAATCTGTCAGTTTAAATTTGAATCTTAG AAACACGAAAGAAATTGCAAATAAAGCGTTAAGCGTTGGTGAACAAAAGA TTTATCGATATGCAGATGGCTTGTCGAGCCCACCTCTAAATTTTCCCAAC GGTCCCAGTCCTACATATGCAGCCTCCATTGATGATGCAATAAAGAAAGT TCGTGCGATAACAAAGAAGGGAATTCTGTTGGTCACAGATAACTATGCAT TTAACTTAAAGATAGATGAAAAAGTCAGATTTCATGATAAGTACCCGCCC CATAGAAAAGACAGCCCAATAGATTTCTTGAAGAAGGGGGGCATTTTGGT CGCATCACGAGATGACATATCGGGTTTCGAATGGCCTGTGGTGATTTACC AGCTCAATAAAACAGACGAAGAAGATATAGATATAGAGCGACACGAATGC AATATGATATCCAGATGCACGTCCTTACTTTATATTGTTGGCGAAGAAAA TAATACAAATATCAATTATTTTCCTTATAACAAAATTCTTAAGATGCTGG AGCTCTTGACAGCAGATAATACCATTACTAATCAATTCAAGCGTAGTACC AGGCATTACGTCTTCGATCACCTCCATAGATTCAATCGACGCGAGTGGCT GCAAGAACTTCAACCCATTTTAAAAGAAACAATTGAACAGATATCTCAAG TTAAAACCATCACTTTCTCGATGTTGGAAAAACTTTTGCTTTTTCTTATT CAAGACGTTTTTAGAGATCAGGAGGCCGCATGGTTTTCTGTTCCCTGTGC GATGAGTTTGCTGTTCGTGAAGTTTATCGATGAGACCGTTTCTTTTGACG AATGGCTCAGCAAGTGCGTCAATATTAAATTCTTTTCCATGCTTGACAGT CATACTTTGCTTACAAGGCTATCCGGAATATCCCCTGAAGGCAAAACAAC AATGTGGAAatactttgaaattgaaaacttgCCTGAAGTGCACCTACCcg aagtcaaaattttgaagattttaaaatcagacagtGAAAATTTAAAACTG TTCAAATTTGTTCTCACAAATTACGTCTTCGATCACCTTGAACGTTTTAA TCGACGCTGGTGGCTGCAAGAACTTCAACCCGTTTTGAAAGAAACAATCG AACAAATTTCTCAAGCTAAAAACGATACCATCACCTTTTCGTTGTTGGAA AAACTTTTGCTTTTCCTTATCAAAGATCTTACCGATTTTAACCATGCGCC GGAAGACTTACTCGACAAAACATCTCATGGTATATCTCATATCAAAGCTA TCTTCTTCGATGAATTTGATACTGTTCCGATAGACATTTTCAATGAATTG AAAACGCGTCTTTTGACTGAAATTCCAGTCTGTTGGGTCGCCCCGAATTG TTCGTATCgagtgaactatgaactttcctCCATCAATAACGAGATTTGGG TTGACTTTCAATCTGTCAGTTTAAATTTGAATCTTAGAAACACGAAAGAA ATTGCAAATAAAGCGTTAAGCGTTGGTGAACAAAAGATTTATCGATATGC AGATGGCTTGTCGAGCCCACCTCTAAATTTTCCCAACGGTCCCAGTCCTA CATATGCAGCCTCCATTGATGATGCAATAAAGAAAGTTCGTGCGATAACA AAGAAGGGAATTCTGTTGGTCACAGATAACTATGCATTTAACTTAAAGAT AGATGAAAAAGTCAGATTTCATGATAAGTACCCGCCCCATAGAAAAGACA GCCCAATAGATTTCTTGAAGAAGGGGGGCATTTTGGTCGCATCACGAGAT GACATATCGGGTTTCGAATGGCCTGTGGTGATTTACCAGCTCAATAAAAC AGACGAAGAAGATATAGATATAGAGCGACACGAATGCAATATGATATCCA GATGCACGTCCTTACTTTATATTGTTGGCGAAGAAAATAATACAAATATC AATTATTTTCCTTATAACAAAATTCTTAAGATGCTGGAGCTCTTGACAGC AGATAATACCATTACTAATCAATTCAAGCGTAGTACCAGGCATTACGTCT TCGATCACCTCCATAGATTCAATCGACGCGAGTGGCTGCAAGAACTTCAA CCCATTTTAAAAGAAACAATTGAACAGATATCTCAAGTTAAAACCATCAC TTTCTCGATGTTGGAAAAACTTTTGCTTTTTCTTATTCAAGACGTTTTTA GAGATCAGGAGGCCGCATGGTTTTCTGTTCCCTGTGCGATGAGTTTGCTG TTCGTGAAGTTTATCGATGAGACCGTTTCTTTTGACGAATGGCTCAGCAA GTGCGTCAATATTAAATTCTTTTCCATGCTTGACAGTCATACTTTGCTTA CAAGGCTATCCGGAATATCCCCTGAAGGCAAAACAACAATGTGGAAatac tttgaaattgaaaacttgCCTGAAGTGCACCTACCcgaagtcaaaatttt gaagattttaaaatcagacagtGAAAATTTAAAACTGTTCAAATTTGTTC TCACAAATTACGTCTTCGATCACCTTGAACGTTTTAATCGACGCTGGTGG CTGCAAGAACTTCAACCCGTTTTGAAAGAAACAATCGAACAAATTTCTCA AGCTAAAAACGATACCATCACCTTTTCGTTGTTGGAAAAACTTTTGCTTT TCCTTATCAAAGATCTTACCGATTTTAACCATGCGCCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000416_pilon | genome | sc0000416_pilon:23397..28817 + |
Properties
| Property Name | Value |
| Aaloc | 1558-2994:3985 |
| Aaloc | 1-1557:1 |
|