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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000264_pilon:134403..138465- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018979 ID=XLOC_018979|Name=XLOC_018979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4063bp|location=Sequence derived from alignment at sc0000264_pilon:134403..138465- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAGCAGACAATTCAAGAAGTTCAATATCGGAGTATCGGGGTCGGG
AGGTATTCAATTCCAAGTCCAACAGAAGAAGATCAGAAGAAATCGGGAGA
ACCCGCACAAAAGGTTTGTTCTCTTTAAAAAGTTGGCTCGGAAATGTTTA
GACCGAGGGATTAACAAGGCTAACAAATACTTGAAGGATGTTGATATCTT
AAGCAATCTTTTAGGAAAATTTCAAAATCCGTAAAATTCCAGCAAAGAAA
CTTGGGCTCAAGCTAATGCTTAGTATATGCTTAAACCGGCTTAAACTCGT
GCTTAAACATATAACATATGTCAGTCATTTTGACTGGGTGTCCCCATTAC
ACAGTGGAGTTGCATACTTTTCCTCTCTGGAGTGTATTGTAAAGCTGGAA
CTTCAACTTCTTCCAGGTTCAAAAGACAGCTGTTTCACCTACAAGCGCTA
AATCACCCGACAGACAATACAAGAAGTTTCATTTTGACCCATCCACAGGT
ACGTTTCTAAAAAGGAGCTTCAGTTCCGAAAGGTTGAAATTCCGGTAATT
AAATCTTTTCCAATATAGAGGTTTTTCATGTTTGGCTAGGCGACGTGATT
TCCACCATTATGGAGACGAACTTTCGATTTGCGTGATGGATCTCTTTGGC
AGTCCCTTATAATACATCTAATTATGAATGTTGACATATATTTAAAGTTA
TTTCCTGGAGCCGGGTTAACTAGTATAATGGGTTTGTTCAAGCAAAGTGA
AGTTCAGAGGAAAGATTGACGTTGTCAAGACTCTTTTTTAACACACATTT
GAGGAAAATGAGATTGATCTTTGTAACACTAGCGAATTCTCAAGGTGTGG
AAAATGTCATCTTTAATCATCTTTTGTTTAAAATTTCACAGGCTCATCGG
CTGTTACCGTTAAACTTGAAGCACCAAAATCACCAACAAGTTACGGAAGC
TCTCCGGTATCACCGAAATCACCATGGTCTGGCGGATCCGGTAGTGTTAG
TCCAAATTATGATGCACCTAAATATAAAACTGAAGTAGTAGAAGAAGTCA
CTTTCGATACGTCAAAATATGCACCAGTTGAGATCGTTGAAGAAGTTGTC
ATCCCCTCATCTCATCTTCAAGTCGAGGCTGACCGGCCCCGTCTTCATTC
AGTTGAAGATGAATTTGATGAAGCATCATCTAAAAGTGTTCATGATAAAT
TGAAATTATTTGAAGATGGTAAGTAAGACATGATCGCCGACCCCGGGGGG
GGGGGTACTAGGGTTGATGAATGAGGGGTATGTGCGGACGGGACTTCCGA
AAACCGACCCTTAGAGAGACCAAATTTTAGTGAAAAAGTGCCCCTTAGAG
AGACTTTCTCGAAAATTTTTCTCTGATTTTCAAAAATTTTCTCTGATTTT
CAAACATTTCCTACCCTTAGTGAGACTTTTTTGTAATTTTTTCTCTCAAA
TCAAAATTTTTTTTCTAAAAATCGTGATTTTCCCACCCTTAGAGAGACTA
CTTTGAAATTTCCTGATTATTGTAACCCTTACAGAGACTTTGAAAGGTGA
AAAACCCGACCCTTACCGTCCGCACATACCCAGCACCTATTTTTGCCTAA
GTACCCCCCCCCCGGGTCGCCGACATGATCATTTTCGATTTCTTTGATGA
TGTCGGAATTTGCCGACATGGGCACTTTCCATTTCTTTGCCGCAAAAGGT
TTTGTATTAGATGGTTTGAAATGAAAAAAGATAATAGCTAAAAGCTTTTC
TATGTTGAAAAATGGGCTCTTCCAGAAAAAATCCGTTCATGGGGGTGGAG
GATGAATTGTCCAGGGGTATTGAAAAAATACCAAAAAATTGCAATGTCCA
GGGGGTAAATTCCAATGTCCAGGGGTAATTTTTTGTGTCCACGGGGTTGA
TTTGATGTTTGTCCAGGGGTATAACCCGTGTCCAGGGGGTTAAAAATCAA
AATTTCCAGGGGTAATTCATGAAAAAAATAATATATCCTCCACCCCCCAT
GAACGGATTTTTTCTGGAAGAGCCAAATCTTTGTCTTCATTTTCTTTCAA
AATACTACTTTTCCTCTTCCAGCGGCGCATCTACCGACTGGTGCACCCAA
GAAGGAACCAACGCCACATCGACCACGATCAAGGGCCAATTCACTTGAAA
ACATTCTTGAAAAGCAGAGGGTATGTCAATTTCTTCTAATTCCTTGATTT
GGTCTCATTATATCTAATGAATCATTTCTAAACCCAATTTTAAGGGTTTT
TAGGATATTACAAAAGATAAGTAATCGCTCAGACATTTAATTGCGGTAGC
GTTTTTCATCAAATTACATAACTTCAACCAAGACTAAGATAGCTGTTTCT
GCAACGGGCTGGATCACGTTTTTGCGGTCTGCTGAGATATCTTGATAAAC
GAGTTCCAAATGAACTTTCTATCATCTCAGATCCTATTTTTGATGAATTA
TTTTCATTCTGCCTGGGTCAAACGCGCACGTTACAAAACCAATTTCATAA
GATTTGACACCAGTTCAAAGGAACCATTTTAATTCTGAAAACGCTTAGAC
GCATTTCATATTTTTATCATTTTTTTTGTTTGAAGTTGATCAGAAACTTA
CATATTGATTTGTGTGTGTGTTTTGTTTTTAATAAACGTAAAATTTTGAA
GCAAAAACCAAGGCCATGCGATCCTATGAATTTCTCGATTTGTCTCCAGT
TTCCTGATATCTGAAAAGGCTGAAAAGCGTTTATTGACGTGACTACAACT
TGCTGAACCCCAATCTAACCAGCACAAAAGGCTTCTAGAATATAAATCTA
TTGGTGGATATCAGGAGTTTTGAATGTATTTTTATATTGATTTTTCTGGA
AAACTATATTCTCAGTTATCTTTTGTTAAGATTAAGTGTTTAATTTTGCT
TGCTATTTTGTATAGGAAGTCATTTCTCAAAATTAATTCCTCGAAGGGCT
GTTATTATGGTTGTTGGGAGTTTCCTGTCCCGTAAAAGATTAACCATCGA
ATTAAAATCACCTAATTACATCATTTCAATCTATTATCCAGCCAATTCCC
ACTACCCAAATTTCACCCTATTTCAGGGGATAAGGTTTTCAGGTCAAATT
ATCAAAATTTGAATACTTAGAAATGCTTCTTTATCATAAGAAAATATTTC
CAGCTAGAAGCGCTCTAGATCCTCAACTGGTCAAAATTACATTTCTGGAC
ATTTTAAAAAGACAACAAACTCAATCGAAAATTTTTAGTTTGTCAGTAAA
AGAAGCTTTTTCAATCAAAAAAAGAAAAGAAAAGATGTATAAAATATTTT
GAACCACAAAAAAATGTTGATCTCATTTGTAAACTTATGACTTGCCAAAC
TGTACTTAAAAAGTTTTTACATAGAATCAAAATCGTAAATTGACACAGCG
TGAAAATGTGTCAATTTTCGGCCTCTTTTCGCCACAAGTTAATGTACTGT
AAATCATTTAAGCTTTCTCATCTCCGGCACACCGGCACATCATCCCGAGC
GCCACTAGTTACAGCAGAACAAGGTAGGGGCGTACGGTATTTCGGAATGC
TGAAATAGTTTCAGTATCGGAAATCCATGAATTTTTGTTCCGGAATTTCG
GTATTATAAAGTTTTTATCCCCCTTTTTCGGAATTCATACATGAAAAATC
AAATTTGATGAAAAATTAGTCAAAACGAGGAAAAATACCTAAAGAGATCA
GTATCGAAATTGCAAGTAGTTTTTTACGGAATCTCGGAAATTTTAGCAAA
ATTATTCGGTATTTCGGAAATCGCAAACACCGCACGCCTCCCGCAAAAAG
ACCAAGACTTTTTTAGATTAGGAAGCAGCTTCAATATGTTTGTAAATCAT
AAAGTCGACGAATAACACTTTTTCGCCCAGCAAAAGCAGCGGAAAGATTC
TTGCGCAAGAAATGAATTACTGGTAAGGAGAGAATCAACCTGCGGTACCA
TGAGCCCCCAACAAACCTGAAATTCACGTCATTGCACCACAAAAAACTCT
CCTCCATCACGCCATCACGCTAATCGCTTCGGGGCCACTACCGCGGCCAA
TTATATGACCCAT Coding sequence (CDS) from alignment at sc0000264_pilon:134403..138465- >XLOC_018979 ID=XLOC_018979|Name=XLOC_018979|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1606bp|location=Sequence derived from alignment at sc0000264_pilon:134403..138465- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAGCAGACAATTCAAGAAGTTCAATATCGGAGTATCGGGGTCGGG
AGGTATTCAATTCCAAGTCCAACAGAAGAAGATCAGAAGAAATCGGGAGA
ACCCGCACAAAAGATGGCGAGCAGACAATTCAAGAAGTTCAATATCGGAG
TATCGGGGTCGGGAGGTATTCAATTCCAAGTCCAACAGAAGAAGATCAGA
AGAAATCGGGAGAACCCGCACAAAAGGTTCAAAAGACAGCTGTTTCACCT
ACAAGCGCTAAATCACCCGACAGACAATACAAGAAGTTTCATTTTGACCC
ATCCACAGGTTCAAAAGACAGCTGTTTCACCTACAAGCGCTAAATCACCC
GACAGACAATACAAGAAGTTTCATTTTGACCCATCCACAGGCTCATCGGC
TGTTACCGTTAAACTTGAAGCACCAAAATCACCAACAAGTTACGGAAGCT
CTCCGGTATCACCGAAATCACCATGGTCTGGCGGATCCGGTAGTGTTAGT
CCAAATTATGATGCACCTAAATATAAAACTGAAGTAGTAGAAGAAGTCAC
TTTCGATACGTCAAAATATGCACCAGTTGAGATCGTTGAAGAAGTTGTCA
TCCCCTCATCTCATCTTCAAGTCGAGGCTGACCGGCCCCGTCTTCATTCA
GTTGAAGATGAATTTGATGAAGCATCATCTAAAAGTGTTCATGATAAATT
GAAATTATTTGAAGATGGCTCATCGGCTGTTACCGTTAAACTTGAAGCAC
CAAAATCACCAACAAGTTACGGAAGCTCTCCGGTATCACCGAAATCACCA
TGGTCTGGCGGATCCGGTAGTGTTAGTCCAAATTATGATGCACCTAAATA
TAAAACTGAAGTAGTAGAAGAAGTCACTTTCGATACGTCAAAATATGCAC
CAGTTGAGATCGTTGAAGAAGTTGTCATCCCCTCATCTCATCTTCAAGTC
GAGGCTGACCGGCCCCGTCTTCATTCAGTTGAAGATGAATTTGATGAAGC
ATCATCTAAAAGTGTTCATGATAAATTGAAATTATTTGAAGATGCGGCGC
ATCTACCGACTGGTGCACCCAAGAAGGAACCAACGCCACATCGACCACGA
TCAAGGGCCAATTCACTTGAAAACATTCTTGAAAAGCAGAGGCGGCGCAT
CTACCGACTGGTGCACCCAAGAAGGAACCAACGCCACATCGACCACGATC
AAGGGCCAATTCACTTGAAAACATTCTTGAAAAGCAGAGGCAAAAGCAGC
GGAAAGATTCTTGCGCAAGAAATGAATTACTGGTAAGGAGAGAATCAACC
TGCGGTACCATGAGCCCCCAACAAACCTGAAATTCACGTCATTGCACCAC
AAAAAACTCTCCTCCATCACGCCATCACGCTAATCGCTTCGGGGCCACTA
CCGCGGCCAATTATATGACCCATCAAAAGCAGCGGAAAGATTCTTGCGCA
AGAAATGAATTACTGGTAAGGAGAGAATCAACCTGCGGTACCATGAGCCC
CCAACAAACCTGAAATTCACGTCATTGCACCACAAAAAACTCTCCTCCAT
CACGCCATCACGCTAATCGCTTCGGGGCCACTACCGCGGCCAATTATATG
ACCCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000264_pilon | genome | sc0000264_pilon:134403..138465 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 727-810:85 |
| Aaloc | 625-723:184 |
| Aaloc | 529-624:1990 |
| Aaloc | 202-525:3171 |
| Aaloc | 118-198:3648 |
| Aaloc | 76-117:3993 |
| Aaloc | 61-69:4002 |
| Aaloc | 1-60:4064 |
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