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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000191_pilon:198120..200481- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035754 ID=XLOC_035754|Name=XLOC_035754|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2362bp|location=Sequence derived from alignment at sc0000191_pilon:198120..200481- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAAACCACCCAAAAAAGAAAAGGATCCTATCTTGGATTTAATATT
ACAGAAGTATATTCAAATTTCAAGAGATTCCATTCATGGACCTGTTGCTT
TAAAAACGGACAAAAAGTTGGTTTCGATAAATAAAGCAAGTGAAAATAAG
AAAATAATTTTTGATAAAATTCCAGATGAGGCAAAGCTTGAGTCTGCCAA
CCTTGATGGTCACAATGTGTCCTGCTTTACTGTTGGGGGCGAAAAAAGAT
TGTGCTTCACTGAGATAGTACATACTATCTTGAAAGAGGTCAATGTACAA
GAAATCTTCAAAAAGCGAGACAGTTTGTTGATATTTACATCAAAATGTAC
ACAGAAGCAGCTCGATGAACTGAAATACATGGAAGTATTACCCTGGACAA
CTACATCGTCAAATCTCATTACAGTGAGCGATGCCTTTCGACTTATTGGA
GTTCTTCAAAGTAATCTTGCCCCTAAAGCAGATCCTGTGAAAAGGACTGC
GCTTAGTTTTGAGGTGTACCATGAATGTTTTGGTGGTTGTATCGGACTTA
TTGAGCCAGAGTTATACACAAGTTTGAGTGCACCGTGTATCAGATGCACC
GAATGTAATGGTCTTTTTTCAATACAGAAATTTGTTTCACATAACCATTC
AAATTATGATGAAGTACACACGTGTCACTGGGGTTTTGACTCATCAAATT
GGCGTTCTTACATTATGCCAGTAGAGCAAAACCCTACACGAGAACTTGTG
AATTTATGGATGTCTGTGAAAAATAAATTCAACAGACCAGATCTGCATTA
TCAAACCATGGAAAAATCAGATAATAAACGCCAAGATGCAGATTTCATGG
CCTATATTAATTCACCAGCAGACAACAAAAAGGCAATGGTCTCTCCAATA
GAAAATCTACGAAACAGGGAGGCTGCATCAGCATTTAGGCCTTGGTCACC
TTCACCGAATTCGTCAAAATATCCCAACAGCTCACATAGCAAATTCCAAT
TCCCTGTACCCCAAAAACCGTCCAACAGGTGTGACAGTCACGAAAACTTG
CCGCTATCTCCTGTTTATATGAACTGTAAGCAATGTAAAACTGCTGCCGA
TGCATGCAACCGTGGTGGCAGTAGAAATGACAATGAACAGAACTGTAACT
GTAAGGACTGTACGCGCAATAAAGACTCTGTAGAAGGCTCAATACAAATG
ATACTCCAAGATTTTACAAATAAAGATAACAGGCTGACTACTGACCCTAA
AGATTTAGCAAAAGTATTAGCGAATGAACTTAAAAAACTGTCATTAAATA
ACGAGGAAAAAGTAAAGGAGATAGCAATAAGCAACCAAAGACTTCAAACT
GAATTACAACTCGTCAAGATAGAATCTTCCAAGAAGCTTTCTGAAGCTAA
AGATACAAAAATGCACATAGAACAAGAACTTGAGTTGTTGCATAGAGAAC
GGCATAAGGTATAATATCCTATAATGTGTTGTTCATTCTACTTTATTCAT
TCTTTTGATTTTTCACCTGCATCCTAGTGAATTCAATTCAATTCTCTGCA
CAAATTTTTGGTTGGCTCTAGTAATGAGAGTTTCCAATTATTATTCCATG
ATTATTTCTTGAACCATATATGCTTGAACTGAACCCAATTCTAAAGCCTG
TAAGACCATTATTGCCATTGTAATATTTTCTTATGTGATTTTTCTCTACA
GGAGATGGAAGTTTTCTCTCAATTAAAACACAACCTTGAACAAGATATAT
CGAATCAAAAGAAAACTGGCAATCCACACGAAATGGAAACATTGTATAAA
GAGTTAACACTTGCCAAAACACATTTGCAACAGGCTGAAATCGATCGAGA
AAATCTACGCAAACAACTAGAATGGTTCATGAAGAATAGGAAGAATGTCA
TGACCGATAACTGGACCCCGTTCCCAACAATGGCGCGCCAGTTTAGCGAT
TCTGAAGAAGAAGCAGAAGACTGTCGAGAGAAATCATCAAACGAGTATGT
TTTTTTCCTCTCCAACTACTTCTTTAGAATCATTTTCTTGTTTTGTACCA
GTTCTTCATCCCAAATCTTTTGAATTGTACAATATTAGGTTCATTGCCAA
TTAAGATAACAATGTACCAGTGTTTGTGAACAGGCTTGTCGAAACATTTT
AGGTTCATTGCCAATGAAAAAGTATTAATAGGGTAGGTTCCTGTATCATT
TGTAAGATCTGGAGAGACCTGGTAGATCTGGGTAGGTTGCAGTAACATTT
TTTTATATTGTGCAATTATATTTTCAATTACTTTATTTTTTCCTGTTCTA
GGGGACCATCCAGTAAATTGATGAGGCTGTCCGAAGAATCAGATATCGAA
GTGGAAAATTAG Coding sequence (CDS) from alignment at sc0000191_pilon:198120..200481- >XLOC_035754 ID=XLOC_035754|Name=XLOC_035754|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3624bp|location=Sequence derived from alignment at sc0000191_pilon:198120..200481- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCAAACCACCCAAAAAAGAAAAGGATCCTATCTTGGATTTAATATT
ACAGAAGTATATTCAAATTTCAAGAGATTCCATTCATGGACCTGTTGCTT
TAAAAACGGACAAAAAGTTGGTTTCGATAAATAAAGCAAGTGAAAATAAG
AAAATAATTTTTGATAAAATTCCAGATGAGGCAAAGCTTGAGTCTGCCAA
CCTTGATGGTCACAATGTGTCCTGCTTTACTGTTGGGGGCGAAAAAAGAT
TGTGCTTCACTGAGATAGTACATACTATCTTGAAAGAGGTCAATGTACAA
GAAATCTTCAAAAAGCGAGACAGTTTGTTGATATTTACATCAAAATGTAC
ACAGAAGCAGCTCGATGAACTGAAATACATGGAAGTATTACCCTGGACAA
CTACATCGTCAAATCTCATTACAGTGAGCGATGCCTTTCGACTTATTGGA
GTTCTTCAAAGTAATCTTGCCCCTAAAGCAGATCCTGTGAAAAGGACTGC
GCTTAGTTTTGAGGTGTACCATGAATGTTTTGGTGGTTGTATCGGACTTA
TTGAGCCAGAGTTATACACAAGTTTGAGTGCACCGTGTATCAGATGCACC
GAATGTAATGGTCTTTTTTCAATACAGAAATTTGTTTCACATAACCATTC
AAATTATGATGAAGTACACACGTGTCACTGGGGTTTTGACTCATCAAATT
GGCGTTCTTACATTATGCCAGTAGAGCAAAACCCTACACGAGAACTTGTG
AATTTATGGATGTCTGTGAAAAATAAATTCAACAGACCAGATCTGCATTA
TCAAACCATGGAAAAATCAGATAATAAACGCCAAGATGCAGATTTCATGG
CCTATATTAATTCACCAGCAGACAACAAAAAGGCAATGGTCTCTCCAATA
GAAAATCTACGAAACAGGGAGGCTGCATCAGCATTTAGGCCTTGGTCACC
TTCACCGAATTCGTCAAAATATCCCAACAGCTCACATAGCAAATTCCAAT
TCCCTGTACCCCAAAAACCGTCCAACAGGTGTGACAGTCACGAAAACTTG
CCGCTATCTCCTGTTTATATGAACTGTAAGCAATGTAAAACTGCTGCCGA
TGCATGCAACCGTGGTGGCAGTAGAAATGACAATGAACAGAACTGTAACT
GTAAGGACTGTACGCGCAATAAAGACTCTGTAGAAGGCTCAATACAAATG
ATACTCCAAGATTTTACAAATAAAGATAACAGGCTGACTACTGACCCTAA
AGATTTAGCAAAAGTATTAGCGAATGAACTTAAAAAACTGTCATTAAATA
ACGAGGAAAAAGTAAAGGAGATAGCAATAAGCAACCAAAGACTTCAAACT
GAATTACAACTCGTCAAGATAGAATCTTCCAAGAAGCTTTCTGAAGCTAA
AGATACAAAAATGCACATAGAACAAGAACTTGAGTTGTTGCATAGAGAAC
GGCATAAGATGTTCAAACCACCCAAAAAAGAAAAGGATCCTATCTTGGAT
TTAATATTACAGAAGTATATTCAAATTTCAAGAGATTCCATTCATGGACC
TGTTGCTTTAAAAACGGACAAAAAGTTGGTTTCGATAAATAAAGCAAGTG
AAAATAAGAAAATAATTTTTGATAAAATTCCAGATGAGGCAAAGCTTGAG
TCTGCCAACCTTGATGGTCACAATGTGTCCTGCTTTACTGTTGGGGGCGA
AAAAAGATTGTGCTTCACTGAGATAGTACATACTATCTTGAAAGAGGTCA
ATGTACAAGAAATCTTCAAAAAGCGAGACAGTTTGTTGATATTTACATCA
AAATGTACACAGAAGCAGCTCGATGAACTGAAATACATGGAAGTATTACC
CTGGACAACTACATCGTCAAATCTCATTACAGTGAGCGATGCCTTTCGAC
TTATTGGAGTTCTTCAAAGTAATCTTGCCCCTAAAGCAGATCCTGTGAAA
AGGACTGCGCTTAGTTTTGAGGTGTACCATGAATGTTTTGGTGGTTGTAT
CGGACTTATTGAGCCAGAGTTATACACAAGTTTGAGTGCACCGTGTATCA
GATGCACCGAATGTAATGGTCTTTTTTCAATACAGAAATTTGTTTCACAT
AACCATTCAAATTATGATGAAGTACACACGTGTCACTGGGGTTTTGACTC
ATCAAATTGGCGTTCTTACATTATGCCAGTAGAGCAAAACCCTACACGAG
AACTTGTGAATTTATGGATGTCTGTGAAAAATAAATTCAACAGACCAGAT
CTGCATTATCAAACCATGGAAAAATCAGATAATAAACGCCAAGATGCAGA
TTTCATGGCCTATATTAATTCACCAGCAGACAACAAAAAGGCAATGGTCT
CTCCAATAGAAAATCTACGAAACAGGGAGGCTGCATCAGCATTTAGGCCT
TGGTCACCTTCACCGAATTCGTCAAAATATCCCAACAGCTCACATAGCAA
ATTCCAATTCCCTGTACCCCAAAAACCGTCCAACAGGTGTGACAGTCACG
AAAACTTGCCGCTATCTCCTGTTTATATGAACTGTAAGCAATGTAAAACT
GCTGCCGATGCATGCAACCGTGGTGGCAGTAGAAATGACAATGAACAGAA
CTGTAACTGTAAGGACTGTACGCGCAATAAAGACTCTGTAGAAGGCTCAA
TACAAATGATACTCCAAGATTTTACAAATAAAGATAACAGGCTGACTACT
GACCCTAAAGATTTAGCAAAAGTATTAGCGAATGAACTTAAAAAACTGTC
ATTAAATAACGAGGAAAAAGTAAAGGAGATAGCAATAAGCAACCAAAGAC
TTCAAACTGAATTACAACTCGTCAAGATAGAATCTTCCAAGAAGCTTTCT
GAAGCTAAAGATACAAAAATGCACATAGAACAAGAACTTGAGTTGTTGCA
TAGAGAACGGCATAAGGAGATGGAAGTTTTCTCTCAATTAAAACACAACC
TTGAACAAGATATATCGAATCAAAAGAAAACTGGCAATCCACACGAAATG
GAAACATTGTATAAAGAGTTAACACTTGCCAAAACACATTTGCAACAGGC
TGAAATCGATCGAGAAAATCTACGCAAACAACTAGAATGGTTCATGAAGA
ATAGGAAGAATGTCATGACCGATAACTGGACCCCGTTCCCAACAATGGCG
CGCCAGTTTAGCGATTCTGAAGAAGAAGCAGAAGACTGTCGAGAGAAATC
ATCAAACGAGAGATGGAAGTTTTCTCTCAATTAAAACACAACCTTGAACA
AGATATATCGAATCAAAAGAAAACTGGCAATCCACACGAAATGGAAACAT
TGTATAAAGAGTTAACACTTGCCAAAACACATTTGCAACAGGCTGAAATC
GATCGAGAAAATCTACGCAAACAACTAGAATGGTTCATGAAGAATAGGAA
GAATGTCATGACCGATAACTGGACCCCGTTCCCAACAATGGCGCGCCAGT
TTAGCGATTCTGAAGAAGAAGCAGAAGACTGTCGAGAGAAATCATCAAAC
GAGGGACCATCCAGTAAATTGATGAGGCTGTCCGAAGAATCAGATATCGA
AGTGGAAAATTAGGGGACCATCCAGTAAATTGATGAGGCTGTCCGAAGAA
TCAGATATCGAAGTGGAAAATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191_pilon | genome | sc0000191_pilon:198120..200481 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1753-1812:61 |
| Aaloc | 1459-1749:662 |
| Aaloc | 1-1458:2363 |
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