XLOC_036222 (mRNA) -

Overview
NameXLOC_036222
Unique NameXLOC_036222
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000182_pilon:565549..566079+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036222 ID=XLOC_036222|Name=XLOC_036222|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=531bp|location=Sequence derived from alignment at sc0000182_pilon:565549..566079+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGTGGGAACTAAAAATCTTTACCTTCAACCGGGTTATCATGCACTACG TTCAGTTAAGACTACCAATGGCAAATTTATTAATTTACATCTGAAAATTA TCAACGTGGATAATCAGCCTAAGTATTGTGCATTCACAGAGGAAGACCCA GTGATGAGTTTTGAATCCCATATTCCAAAAGAATGTGTTTCACAAGCGTT GGATGGTGTTAAAGCTATCAAGTCGAAAAAGAACTGGTCTGCAATTGAAT ATTTTGGACTCCAAAAATCTGAAGTGCAACAAAAACTGACAGCAGAATGT GACAAGCTTCTTCAAGATTTGCAGCCAGGTGAAATaagtgatgatgatga tgatgatgacaatGAAAAGGATACTAATGATCAAATTAATGAAGCACCTC TACTTCTAAATGTTCTAAATATTAGGAAACGCAATGCTGGACCGACTAGT TCCTTATGCCCAAAAGCCATCAAGGCTCGTAATGAAATCATCCACAATCT TGTCAGATACACTTCATTTGGAGACGTAAAA

Coding sequence (CDS) from alignment at sc0000182_pilon:565549..566079+

>XLOC_036222 ID=XLOC_036222|Name=XLOC_036222|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=954bp|location=Sequence derived from alignment at sc0000182_pilon:565549..566079+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGTGGGAACTAAAAATCTTTACCTTCAACCGGGTTATCATGCACTACG
TTCAGTTAAGACTACCAATGGCAAATTTATTAATTTACATCTGAAAATTA
TCAACGTGGATAATCAGCCTAAGTATTGTGCATTCACAGAGGAAGACCCA
GTGATGAGTTTTGAATCCCATATTCCAAAAGAATGTGTTTCACAAGCGTT
GGATGGTGTTAAAGCTATCAAGTCGAAAAAGAACTGGTCTGCAATTGAAT
ATTTTGGACTCCAAAAATCTGAAGTGCAACAAAAACTGACAGCAGAATAA
AGTGGGAACTAAAAATCTTTACCTTCAACCGGGTTATCATGCACTACGTT
CAGTTAAGACTACCAATGGCAAATTTATTAATTTACATCTGAAAATTATC
AACGTGGATAATCAGCCTAAGTATTGTGCATTCACAGAGGAAGACCCAGT
GATGAGTTTTGAATCCCATATTCCAAAAGAATGTGTTTCACAAGCGTTGG
ATGGTGTTAAAGCTATCAAGTCGAAAAAGAACTGGTCTGCAATTGAATAT
TTTGGACTCCAAAAATCTGAAGTGCAACAAAAACTGACAGCAGAATatga
tgacaatGAAAAGGATACTAATGATCAAATTAATGAAGCACCTCTACTTC
TAAATGTTCTAAATATTAGGAAACGCAATGCTGGACCGACTAGTTCCTTA
TGCCCAAAAGCCATCAAGGCTCGTAATGAAATCATCCACAATCTTGTCAG
ATACACTTCATTTGGAGACGTAAAAatgatgacaatGAAAAGGATACTAA
TGATCAAATTAATGAAGCACCTCTACTTCTAAATGTTCTAAATATTAGGA
AACGCAATGCTGGACCGACTAGTTCCTTATGCCCAAAAGCCATCAAGGCT
CGTAATGAAATCATCCACAATCTTGTCAGATACACTTCATTTGGAGACGT
AAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036222XLOC_036222-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000182_pilongenomesc0000182_pilon:565549..566079 +
Properties
Property NameValue
Aaloc499-675:355
Aaloc319-495:121
Aaloc295-315:100
Aaloc244-282:61
Aaloc187-243:1