|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000026_pilon:501787..505120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036857 ID=XLOC_036857|Name=XLOC_036857|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3334bp|location=Sequence derived from alignment at sc0000026_pilon:501787..505120- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGAAGGGCATTGTGTTATCCATTACACTAATTTTGTTATTGGT
TATAATCGAGGCGCTCGAAACTGACCAATGTGGCCCTAAAGATTCTTATT
TTGTAAAATCGAATAAAGGCTGGGAAATTGGGACGGGATCTTGGAGTGAC
TCTTTCAAAGTCGATAATGAGATACAATGCCCCTCAAGATGTCATCGTGT
GCCTAAATGTGTTTCTGCTGCATTTTATGTGGACACCAAAATATGCCGTC
TGTCAGATACAAACCGAATGACCGTTAATGCTGCTTTGAAACTTGTACCG
GGAATTGTGTATTACGAGCGGAAACTATGTTCTTCGAAAAAGACTAGTTT
CATAGCTATCATACCGAGCGCGAAAGATTGCACAGATATAAAACGAAAGG
GTTGGAAATCGTCTGGTGTTTACGCTGTTGGAGAAGGAGAAAACCCCCGT
CAAATTCTTTGTGAAATGTCACTGTTAGACGGGGGTTGGACCGTCTTTCA
AGAACGTGTCGATGATTCAGTGTCTTTCCAACGGAACTGGGCTGACTACA
AAGAAGGCTTTGGATCGTTAGACGGTAATCTTTGGTACGGAAATGATCAG
ATTCACAATTTGACCTGGTATTCTGAGCAAGGTAATTAATTTTGTTTTCT
TAAATTGATTTGTCAAAGTAGAAATAAATTTGGTTGCAGCTACCATAGAA
AAACTCATCTCAAAATATTTTCATTGTGCAACTTGGTAGAACTTTCACAG
ATGAGATGGAGTTTTTATAAGATACTTTAATAATTGGTCATTTGTAAGTA
AAAGTAAAATAAGTAAAAAAATTAAGCGTTCTTTAGAAAAACGACCAACC
AAATCAAATAAGAGCTTGTAAAAACTCCATCTCACCCCAACTTTCAAGGT
GTGTACCACAATCGTGACATGAGCTAAACCTTGCTGTTTCTTAGTTTTTT
TGCGAGCTAAATTTTTCGTTACTTCCAATCTAACGTTTTCATGAAAACCA
CGCGGGCCGCGCGCCTTTGATAGGAAATTAGTGGTTTCATCTCCCATCCA
AATGTCTTGAGTCTTGCGACACGTGCATGGATATAATAAACGCACAGATA
TCTTAAATGTCAAAAACATAAGATAGAGCGACTCTGAGCTACTCTGTTTT
TTCCAAGCAACGGTATTTGAAGCAAAATAATCCGCCATCTCTGCTGAAAA
AAGACCATAGTAGACCATAGTTCGGTACCGGCAATTTGTTCAATCAAAAC
AAAGAACTGATAAAGGAAGCGAGAAAATGTTCTTGATTGATCAAATTGCC
GGCGCCAAACTGTGGTCTACTTTTTCAAGATCGCGGATTATTTTGCTTCT
ACCAAGGACGGAGCAGCTCTATCTATTGTTTTTTTAATACAAGATATCTG
TGGATATACCCTGTTACTCATTTTCAGTATTTTTTAATTCACAGGAAACG
AACTCTTGATAGAAATGGTAAGACCAAATAACCAAATCTATTATCTCCTG
TATGATGGATTCAAAGTGGCTGCGGAAAGTGATGACTACAGATTAACTAG
TGGCAATTACCGAAATGCGGGCATTGGAACTGTGATCAATGGATATTTTT
ATGGCTTAGGATCGCATGATCAAATGAGATTCAGTACTATCGACCGTGAT
AATGACATTAAATCGACTGAACATTGTGGACAGGTTAGTTTGTTTCGTTC
TCAACTTTGGCTACAATTTTGTATAATGTCCAGGGGGGGGGGGTAGTAGG
GTTGGCGGATGAGCGGTATGTGCGGACGGGACCTCCGAAAACCGACCCTT
AGAGACTGAGTTTTGCTGAAAAGGTTATCCTTAGAGAGACTTTTTTACAT
TTTTTTCACTCAAAATAAAAAATATTTTCTAAAATCGTGAACTTTCTACC
CTTAATGAGACTAGTTTAAGCTTACACAGCACCCCTTTTTGACTAAGTAA
CCCCTCCCGGATATAATGTATGTCTTTTCAGATGAACAGATAAAAAGTAT
ACATACTTGAAGCTGCTTGCTGACCTTGCAAGAACAGTGCAAATAATATA
CACAAGGTTCATCAAGATTGGGCTTTTTCATTAAATTTCCATACAGGTGG
ACATACCTTTTCTAGGGCAAAAAAGATTGCGAAAATTTGTCGGTACCCCG
TGGACAATAACAAAATTTGCAAAAGAACCCTTGGAAAACTTCTTTCCATA
CCTTAAATGTGAGGGTAACGAACTAAAGTCATTCTTTTACACCTTGGAAA
TTTTTAGAATAACCTTTTAACTCCTGGAAAAAATGATATACATACTTCTT
TATACCCCCTGGAAATTCTTCTTCGATTACCCCTAGGAAATGTTCGTACA
CCCCCCCTGTATGGATATAAAATGTAATGGCCCATTGTAGATATAGGCCA
TTCTTTTTAATTTTTATTCAACAATTTCAACGTCAAAGCGTTCTAAATTA
ATGGTCTTCATTATGTAATTTTAGATAGGTATTCCATTGTTCAATGTAGA
ACAATCACTTTATGTGGCGCGTGCTGTTTTGTTTTGACGATGCAATGTTT
TCGCGAGCTCAGCTTATTTTTCTCAGCTTTAAACTAATTTGGCTTCCTTT
ACATTGTCCTTATTGGAATGAGGTTAGCGAGGGATGCCCCCACAGATATC
TTATTTAAAACACCAGTCTATATTGAGCTACTCTATATTTCCCAAGCAAC
GGCAGGTGAAGCAAATCAACCCACTATCTTTGCTTAAGTAGGTCACGTTA
AGTAGGTTGGTTTTCACTGTTGAAACTTTTTTGACACTGCAATGACAAAA
TTTCAAGGTTGCGAGATAACTAAATTGTGACGTCACTTCTTTCAAGATGG
CGAATTATTTTGCTTCAGCCTCTTTAGGCGTACAAACTTTCGCGAGCAGA
AACTTTCGTGAGCAGAAACTTTCGTGAGGACGAAAAATTCGAGACATTTA
CTTTCGCGAATTTAACGGAAAAGATTTTCGCGAAAAGAGCCAAAATTCGC
GAAAATCGCGAAAGTTACTGCTCGCGAAAGTTTGTACGCCTAAAGTAGGT
CCGGAGTAGTATTGTTTTATAAAAGATATCTGTGGTTGCCCTTCCTCATT
TGTATTTTTCCGATTTTTGTTAACCTTCATGCAAACGATATCACAATTTC
TCTTTTTTAGAACCGTGGTAGTGGATTTTGGTTCAATTATTGTTTTTTTC
TCTCGCTTAACGGGATGTATGGTTCCCAATATAGCGGCTCACCATACAGA
GGAATTCATTGGACCTATTTATGTGACGGCCCGTTTTGTGAAACTCTCAT
TTCAACTCGAATGATGACTCGACGAAAACAATAA Coding sequence (CDS) from alignment at sc0000026_pilon:501787..505120- >XLOC_036857 ID=XLOC_036857|Name=XLOC_036857|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2088bp|location=Sequence derived from alignment at sc0000026_pilon:501787..505120- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGAAGGGCATTGTGTTATCCATTACACTAATTTTGTTATTGGT
TATAATCGAGGCGCTCGAAACTGACCAATGTGGCCCTAAAGATTCTTATT
TTGTAAAATCGAATAAAGGCTGGGAAATTGGGACGGGATCTTGGAGTGAC
TCTTTCAAAGTCGATAATGAGATACAATGCCCCTCAAGATGTCATCGTGT
GCCTAAATGTGTTTCTGCTGCATTTTATGTGGACACCAAAATATGCCGTC
TGTCAGATACAAACCGAATGACCGTTAATGCTGCTTTGAAACTTGTACCG
GGAATTGTGTATTACGAGCGGAAACTATGTTCTTCGAAAAAGACTAGTTT
CATAGCTATCATACCGAGCGCGAAAGATTGCACAGATATAAAACGAAAGG
GTTGGAAATCGTCTGGTGTTTACGCTGTTGGAGAAGGAGAAAACCCCCGT
CAAATTCTTTGTGAAATGTCACTGTTAGACGGGGGTTGGACCGTCTTTCA
AGAACGTGTCGATGATTCAGTGTCTTTCCAACGGAACTGGGCTGACTACA
AAGAAGGCTTTGGATCGTTAGACGGTAATCTTTGGTACGGAAATGATCAG
ATTCACAATTTGACCTGGTATTCTGAGCAAGATGATGAAGAAGGGCATTG
TGTTATCCATTACACTAATTTTGTTATTGGTTATAATCGAGGCGCTCGAA
ACTGACCAATGTGGCCCTAAAGATTCTTATTTTGTAAAATCGAATAAAGG
CTGGGAAATTGGGACGGGATCTTGGAGTGACTCTTTCAAAGTCGATAATG
AGATACAATGCCCCTCAAGATGTCATCGTGTGCCTAAATGTGTTTCTGCT
GCATTTTATGTGGACACCAAAATATGCCGTCTGTCAGATACAAACCGAAT
GACCGTTAATGCTGCTTTGAAACTTGTACCGGGAATTGTGTATTACGAGC
GGAAACTATGTTCTTCGAAAAAGACTAGTTTCATAGCTATCATACCGAGC
GCGAAAGATTGCACAGATATAAAACGAAAGGGTTGGAAATCGTCTGGTGT
TTACGCTGTTGGAGAAGGAGAAAACCCCCGTCAAATTCTTTGTGAAATGT
CACTGTTAGACGGGGGTTGGACCGTCTTTCAAGAACGTGTCGATGATTCA
GTGTCTTTCCAACGGAACTGGGCTGACTACAAAGAAGGCTTTGGATCGTT
AGACGGTAATCTTTGGTACGGAAATGATCAGATTCACAATTTGACCTGGT
ATTCTGAGCAAGGAAACGAACTCTTGATAGAAATGGTAAGACCAAATAAC
CAAATCTATTATCTCCTGTATGATGGATTCAAAGTGGCTGCGGAAAGTGA
TGACTACAGATTAACTAGTGGCAATTACCGAAATGCGGGCATTGGAACTG
TGATCAATGGATATTTTTATGGCTTAGGATCGCATGATCAAATGAGATTC
AGTACTATCGACCGTGATAATGACATTAAATCGACTGAACATTGTGGACA
GGAAACGAACTCTTGATAGAAATGGTAAGACCAAATAACCAAATCTATTA
TCTCCTGTATGATGGATTCAAAGTGGCTGCGGAAAGTGATGACTACAGAT
TAACTAGTGGCAATTACCGAAATGCGGGCATTGGAACTGTGATCAATGGA
TATTTTTATGGCTTAGGATCGCATGATCAAATGAGATTCAGTACTATCGA
CCGTGATAATGACATTAAATCGACTGAACATTGTGGACAGAACCGTGGTA
GTGGATTTTGGTTCAATTATTGTTTTTTTCTCTCGCTTAACGGGATGTAT
GGTTCCCAATATAGCGGCTCACCATACAGAGGAATTCATTGGACCTATTT
ATGTGACGGCCCGTTTTGTGAAACTCTCATTTCAACTCGAATGATGACTC
GACGAAAACAATAAAACCGTGGTAGTGGATTTTGGTTCAATTATTGTTTT
TTTCTCTCGCTTAACGGGATGTATGGTTCCCAATATAGCGGCTCACCATA
CAGAGGAATTCATTGGACCTATTTATGTGACGGCCCGTTTTGTGAAACTC
TCATTTCAACTCGAATGATGACTCGACGAAAACAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000026_pilon | genome | sc0000026_pilon:501787..505120 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 871-1044:175 |
| Aaloc | 634-870:1889 |
| Aaloc | 1-630:3335 |
|
