|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000322_pilon:318959..322387+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006433 ID=XLOC_006433|Name=XLOC_006433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3429bp|location=Sequence derived from alignment at sc0000322_pilon:318959..322387+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGACAATGATGAGGAAGAGCCTAAAAAGAAAGGTAACGCTCTGCC
ACTGTGGGGTAACACACACTCTATGAACATCAACAATCTCATTGTCACTA
ATATCTTGGCCAGTCCCTACTTCAAGAATGAACTGTTcaagttaaaaact
tttcatgaaGTGATTGATGAGATTTACTACAAGGTCAGTttgttattgtt
tcatttttttcttcttccaatAAATGCATTACTGCATCTTCTCATCTCCT
ATTGGAAAGCAAGTACTGGAAAATGCAATTTATTAACAGgatgtttattt
ttattatgaaGTGCAAATAAATTAAGTGGTTAATACTTAATAATGTCCTC
GTACTTTTAAAAAGCTCTTACTAAACCTTTCAATGATTTATGACCAATTA
TTTTCCCATTCTTTTGGAAATGAACCTTCGAGTATATTCATGAAATAACT
TAGCTTTTCAACAAATTCTAGTCCTGAATAAAAAAGAATTGACCCTTTTC
TTTTCTCACTGAAATAATGTCTAATCCGTTGTTCTGTTCCTTTATTTCTC
GTGCAGGTTGAACATTTGGAGCCGTGGGAGCGTGGTAGTAGAAAGACACA
TGGACAAGTCGGAATGTGTGGTGGTGTACGAGGTGTTGGTGCTGGAGGGA
TCGTATCTAGTGGTTTTTGTCTCCTATACAAACTCTTCACCCTTAAATTG
ACAGAGAAACAATTACTACAACTCATCAACCATAGAGATTCGCCATACAT
TCGCGGTCTCGGATTCATGTTTATACGGTATTGTCAACACCCCAACACGT
TTTGGGACTGGTACGAGTCCTATCTTGAAGATGATGAGGAAGTAGATCCG
AAGGCAGGTACgccattttttttctccatgtGTTTCTGTTGGAAAGAGCT
aagcttttgtttttttagaaatacATGCTGATAAAGTATAATAGTATAAG
GGGACGGTAGAAAGCGAATCAAGTTTAGATATTGAATAAATCATGCTCTG
TCTTTTTAAATGCCTTAGTTTTATTCTGCTATATTAACTATTGTTTGTTA
CAATCGCTTGCTTTATGCTGactattcaatttttttattcatttgttttt
tttctctcccAAGTAACCAGTTTGATTTTGGAAATGTCGTAAAACCGCAA
ATAAGAAAGCAAAACATTTATTGTTAAAACACAGTTTCAAGATTTTCCAA
ACTTGCTTAAAAATCGTATTTTACAAGATTCAGGGCAGGATTAAATACAC
AGGGATTAAATCATTATTCATGAATTTTCTTTACTGTTCAATCACAGtga
atttcaaagttttactcACGTAAAACCTTATTCTCGCAAAAAGCAACATG
AGTTAGTTATGTTTTGCCAGGACTACATGCAGTGcagatttcatttattt
tcatttatttaggCCTTTTAAAATCTTCACTGTGACGATTCTCAAAAAGA
AAAGCCATTTAAGTAACATAAacgaaccaaataaaaaatcttttaatcat
TTATTTTAACCTAAAAGTCTGCCAGGTCACTTTTTTCATGATGAGGTTGT
TTTGCTGTTGGCGTTACTCGAGGGTAACTAAAACTCAATTTCGCAAAGGT
TAGAATGCATTAAGCACAGTCAATATCAGTGTTAAAAAGTCGCTCCGTTT
CAGACGGTTTTCCGTCTCAGCAAAGTGTATAAAGAGAGGCTTTTCTGTCT
CAAAACTCTATAATTCACCAAAGTTCCAAGAATATTTGCTTATTGGCTGT
GTAAAATCTATTTCCGTCTCAGACGCAAAACCTAGACTACTGCGATATGA
TGAACAccagattttttttgaaaaatagaactTGCTCTCCCAAGTTATAT
GAGTCTGGCTACAAAATTGGTGAATTTTGCAATAGTTTCTATCAGTTTTT
TGAAACCTACGGTGAATATTTCCGATCCATACAGAAACCTTTTTCTCGTC
CGTCCTCATTACCTTGCACGAAGAAAGTACtttttttGAAACAGTATTGA
AGTAcaaaagaatgaagaaagaagTAAAACGAGATTTGAGGTACCTCTTC
TGATGTTCATTTTCTTTCACCAATAGCTAGTCCTGTAGAACTTTGTCGAA
AATAGAGTCAACCTTTTGTTGATAGAATAATGAACTTCAAATATAATCCT
TGATAACCTATTATCTTCTCATCATGATGATTTTAATTATCTTTTCTAGG
CGGAGGCTCTCAGATGACAATCGGTCAAATGATTCGTAGTTTCCTATTGA
AACCGGACTGGTACGGCACCTTATTCCCTCGTATACCGGTCCCCATCCAC
AAAGATATCAATGCACGCCTTCAAGAGATGAACTTGGATGACGAAAGGAA
AGTGTATGCAAATGAAGGGGCGGATGAAGAGGGAGCTGAAGCAGgctatg
aaaatgaagatggcGCCAAAGGTTTGTCttctgttatatttttctttact
ttcctCATCATTCTCCAGTTGAGTTGTTTGCTTTCGTCTATTTTCAACCC
TACGTATTGTCCAATGAGATCCTTAGCACTTTTTgagacgagatggagtt
tttacaagctcttatttgatttggttggtcgttaacaagtaataaaacaa
ttttgttactttttctaaagaacgcgtcatttttattacttcaaatgacc
aattattaaagtactatcgggtacctaatagtcgggggggattggaataa
gcggggaggggttggaaaaaatgtcaaaacttaataagcggaggggttgg
aataaaaatttttgaaaaggaggctaatacagcagaattaggacaaaaga
gggaactttcaaaaacattttccaaaaattaataagcgggggggggggcg
gaatAAGAGTGTCCTgggtggaaactttttgaaaaattaattagcgggag
GGGACGGCTAcaaggtacccgagagtatcttataaaaactccatctcatc
tgttaATTTTAAAGTGCATTTGCGACAATGAGCTCTTAAATCGCTGAATA
CTTCAACATAACCCCCCAAAAAGAAAGCAAACTATTGTTagtttctcttc
tttctttatgATAGATGATGCTGAACGTCACTCACGACAAGACGAAGGTT
CGTCAAGTAAATCACGTGACCGCGATCGCGATCGTCGATCTTCTAGTCGC
CGAAGAAGTCGTTCTCGTGAACGTGAAAGCAAGAGAAGTCGATCGCGTGA
TCGCAAAAGAAGTCACAGTCGCGATCGTAAGAGAAGTCGGAGTCGGGAAC
GTAGTCATGGACGTCATCGGGATCGTGACAGGAGCCATAGCGATCGTGAT
TCACGCAAGAGAGATGGTGATAAAGATAGACATTCTCATAAGAAACATTC
ACGCGACCGATCGCGAGATCGTGGTGGTCGACGTGATGAGAAACGAAGGA
GTCGGAGTCGTGAAAGAAGCCGACGTTaa Coding sequence (CDS) from alignment at sc0000322_pilon:318959..322387+ >XLOC_006433 ID=XLOC_006433|Name=XLOC_006433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2142bp|location=Sequence derived from alignment at sc0000322_pilon:318959..322387+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGACAATGATGAGGAAGAGCCTAAAAAGAAAGGTAACGCTCTGCC
ACTGTGGGGTAACACACACTCTATGAACATCAACAATCTCATTGTCACTA
ATATCTTGGCCAGTCCCTACTTCAAGAATGAACTGTTcaagttaaaaact
tttcatgaaGTGATTGATGAGATTTACTACAAGATGGCTGACAATGATGA
GGAAGAGCCTAAAAAGAAAGGTAACGCTCTGCCACTGTGGGGTAACACAC
ACTCTATGAACATCAACAATCTCATTGTCACTAATATCTTGGCCAGTCCC
TACTTCAAGAATGAACTGTTcaagttaaaaacttttcatgaaGTGATTGA
TGAGATTTACTACAAGGTTGAACATTTGGAGCCGTGGGAGCGTGGTAGTA
GAAAGACACATGGACAAGTCGGAATGTGTGGTGGTGTACGAGGTGTTGGT
GCTGGAGGGATCGTATCTAGTGGTTTTTGTCTCCTATACAAACTCTTCAC
CCTTAAATTGACAGAGAAACAATTACTACAACTCATCAACCATAGAGATT
CGCCATACATTCGCGGTCTCGGATTCATGTTTATACGGTATTGTCAACAC
CCCAACACGTTTTGGGACTGGTACGAGTCCTATCTTGAAGATGATGAGGA
AGTAGATCCGAAGGCAGGTTGAACATTTGGAGCCGTGGGAGCGTGGTAGT
AGAAAGACACATGGACAAGTCGGAATGTGTGGTGGTGTACGAGGTGTTGG
TGCTGGAGGGATCGTATCTAGTGGTTTTTGTCTCCTATACAAACTCTTCA
CCCTTAAATTGACAGAGAAACAATTACTACAACTCATCAACCATAGAGAT
TCGCCATACATTCGCGGTCTCGGATTCATGTTTATACGGTATTGTCAACA
CCCCAACACGTTTTGGGACTGGTACGAGTCCTATCTTGAAGATGATGAGG
AAGTAGATCCGAAGGCAGGCGGAGGCTCTCAGATGACAATCGGTCAAATG
ATTCGTAGTTTCCTATTGAAACCGGACTGGTACGGCACCTTATTCCCTCG
TATACCGGTCCCCATCCACAAAGATATCAATGCACGCCTTCAAGAGATGA
ACTTGGATGACGAAAGGAAAGTGTATGCAAATGAAGGGGCGGATGAAGAG
GGAGCTGAAGCAGgctatgaaaatgaagatggcGCCAAAGGCGGAGGCTC
TCAGATGACAATCGGTCAAATGATTCGTAGTTTCCTATTGAAACCGGACT
GGTACGGCACCTTATTCCCTCGTATACCGGTCCCCATCCACAAAGATATC
AATGCACGCCTTCAAGAGATGAACTTGGATGACGAAAGGAAAGTGTATGC
AAATGAAGGGGCGGATGAAGAGGGAGCTGAAGCAGgctatgaaaatgaag
atggcGCCAAAGATGATGCTGAACGTCACTCACGACAAGACGAAGGTTCG
TCAAGTAAATCACGTGACCGCGATCGCGATCGTCGATCTTCTAGTCGCCG
AAGAAGTCGTTCTCGTGAACGTGAAAGCAAGAGAAGTCGATCGCGTGATC
GCAAAAGAAGTCACAGTCGCGATCGTAAGAGAAGTCGGAGTCGGGAACGT
AGTCATGGACGTCATCGGGATCGTGACAGGAGCCATAGCGATCGTGATTC
ACGCAAGAGAGATGGTGATAAAGATAGACATTCTCATAAGAAACATTCAC
GCGACCGATCGCGAGATCGTGGTGGTCGACGTGATGAGAAACGAAGGAGT
CGGAGTCGTGAAAGAAGCCGACGTTaaATGATGCTGAACGTCACTCACGA
CAAGACGAAGGTTCGTCAAGTAAATCACGTGACCGCGATCGCGATCGTCG
ATCTTCTAGTCGCCGAAGAAGTCGTTCTCGTGAACGTGAAAGCAAGAGAA
GTCGATCGCGTGATCGCAAAAGAAGTCACAGTCGCGATCGTAAGAGAAGT
CGGAGTCGGGAACGTAGTCATGGACGTCATCGGGATCGTGACAGGAGCCA
TAGCGATCGTGATTCACGCAAGAGAGATGGTGATAAAGATAGACATTCTC
ATAAGAAACATTCACGCGACCGATCGCGAGATCGTGGTGGTCGACGTGAT
GAGAAACGAAGGAGTCGGAGTCGTGAAAGAAGCCGACGTTaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000322_pilon | genome | sc0000322_pilon:318959..322387 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-1068:3079 |
| Aaloc | 709-717:3067 |
| Aaloc | 487-705:2202 |
| Aaloc | 184-483:557 |
| Aaloc | 1-183:1 |
|
