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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000847_pilon:6512..10126- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038810 ID=XLOC_038810|Name=XLOC_038810|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3615bp|location=Sequence derived from alignment at sc0000847_pilon:6512..10126- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATTGGATATCAGTTAAAAGAGGTCAAGAAAATGTTGGAGCAGT
CAAGAATTATTGCGAATCTGTTGTTTTTGTCAGGTTTTATGGACAGACGA
ATAGTATGAAGGTAAGAAAGCATTCATTGTGGTTGAATTTGCCATTTTGC
CGAAATCAGCCTTGGGTTGATGTATTTCAGGGTTGCAAAATCCTATTGAC
TTTTGAACTGTTAGGTATTAATGACAAACCAGCGTTTATGCTGAAAAATA
CTTTTTTTGTTAAATACGGGACTGGGCCCAGGTTTCTTTCCAGATCCATA
ACCATATTTTTTTTTGTTTAATTAGGGTCCTCAAGACCATGAAGAAGTGG
ACGGCCCTGATCATCACCCCAAAACACAACTCGGACACATTCTCAATAAA
CTCGATCAAGAAATTCGAAAAGCATCTGCTGCACATCAACTCGAAATAAC
AGATGAATTCAAAGAGCTTTTGCGGGATGTTGCTAAATCCAGGGTGTGCA
CAAAAGAATGCGAAAATGAAGAAGAATGTCATAACAGGTTATTGGGAGAT
GCAGAGAAATTTGTTGAAATATATAAGAAACGTGGATGTAAGATTTTTAA
ATACTAAAATTGTCGAGATGAACCTTGCTTTGACCTTCCACGTTTTGTAC
CATGTTGAGACAATGTGCAAACGTTTTTAAACTCTTTTGCTGAAAGGAAC
CCTAAAGGGATCGGGTTCGAATGATGAATGACGTCAAATGTTTAAAGTCT
TTGAATTGACATACTTATGGATAGTTAAGGCCGGTCTCCACTTGCGCGCG
CTTCGATCGCACTTTTTCGAGCAAAGCTTCCACGCTATTGGTCAAAAGAA
AAATGAAGCAACTCCATTGGCGCGATCTGACGTAACGGTTGAAAAAAGTT
GAAATGTGTTCAACTTTTTTTTCCAGCGCGCGCTACATTTTTATGACGTA
ATCTTTTTTCCAAGCAAAAACGATTGAAGTCAAAAAGTGCGATCGCAGCG
CGCGCAAGTGGAGACCGGCCTTTACTACAAACATTTTTGATGTCATTAAA
CCTGTAAAACTCAAATCGAAATCCCTTGTGGCAATAAGTCAATGAGATAT
AACTGAAGGCTAGAGTCGATTCTCTCTTGAGCGATTTGAAGCCACATTTT
CCTTCTTCGCGTGCTTTTCGTACAAACGAAGGAACGTTCGGAAGTAACAT
TTCTGCCAGAATTCGTAAAAAATATAAAGCGAAAACAAAAGAGTGCTAAA
TTCCATCAGTCATTGCGATGCACATCTTAACGCATCACTTTTTCCTCCTT
TTTGAGGCCTCCTCATTCTAGCCTTCGTCGGGTATACTTTAATGGTCAGG
CTTCATAAATATTTTGAGCAAACATTTTGAAATATTTTTCAGGTGAATCG
GAAGTTCTTCATCAAGACCATTCATTTTATTGGGGAACGCGACAGCAAAT
GTTGTTTGGCAAAGTGATCGTTGATTGGCTACCTGAACACATCGAGACAA
AAACTCCACCTATGGATCCGATCTTTGGAACGCTGTTGAACCCTACTGGA
GGTAATTTATTCTTCTTTATCGACCCCGCTTTCTTAGCCGACCCTAATAA
TGTGTTGTATGCCTAATAAAAACTGGTATAACGCAAGTGGAAATATATTT
ATAATGAGGTATTTATAAAGAAAAAGGGTCTTAGTAGACGAAATTTACAA
ATTAATCAAAAAGTAATTTCAGCTAACCCTTCGTTAGCTGGCCATAGTTT
GAAATCACTTGCATTGAAAATGTCCTGTTTTGTTTGAACCCTATTCGTAC
TAGGGGGGGAGCTGTTTCTGTTCGGGGGTTAATAAAAAAAGAGCTTTTGG
CATGAAATTATCTGTAAATTCTTAACTGAGGCAAACGTTTGATATTAATT
GAGATCGACAGTATAAACTGAAAATTTATTTGAAGTGGACTTTAAATTAG
CTTTTATTTTTGAACTCGATTATATGGCCAGTTTTTTGCCGTGTCTAATT
CAAATATATAAAATCGGCAAAAACGAGGCAAAAGTTTGATATTAATTGAG
ATCGACAGTATAAAATGAAAATTCATTTGAAGTGGACTTTAAATAAGCTT
TTATTTTGAACTCAACTTTAAATAAATTGAGGAAACCCCTATTTAAACAA
AAGAAACAAAGAAGTTTGGTGTCTTTTCACATGAAAACATTATTGTTTGA
ATTAAGATCGACAAAAAAGAAGGCCGTTTAAACCAGTGCCGATCTTTTGC
CGCTCTTTTTAATTAAGTTCAGCAAAATTTGCCGTGTTCAATTGTTAAGG
TCGACCTCAAATCAAAATTTGATTTATACAGCCGCTCTTTTGCCGCACTC
AATTAGACTTTTTTTAGTTTTTTTGATGAAGTTATTTGAATTAGACACGG
CAAAAAACCGGCCATATAAACTACGCCTAAAAATAAAAAAATTTGACACT
TAAAGAATTTCACACCTTGAGCATGATTACATTTCTGACAGTAAGGTGTC
ACAAAAATTGACACATTACCAATACAATTTGTTTTTTATGTCAAATATAT
CGTTTAAACCGTAATTTATTGAATATTTAGTATAGAATAATCATTTGTTA
GAAAACAATATAACAATAGCGTTCAGTTTGAGGTCGTTGTTGTTATTTTC
TGCCCGCGTAGTTTGATTATTCGCCCGATAGTGTCATTTGGGCCCGAATT
TGGGCAGAATTTATGACAAAAACGAACGAAAACTTTACGCTATTACTATT
ATTATCCATTTTGGACATTCAAACAGTGTTTTTTTCTAGCGTCAGCCAAG
TTTTTTCGCTTCAATGCAATGTCTTCAACAAGTTTTGAGTGCCCTTGCGA
GCGGGCGGCAAATGAACAAGAAGTGTTTTTTTCTGACGTTAGTTAAGTCT
CACCGCTTCAATGCAACAACTTCAATCCAATTCCGAGCGGGCTGCAAATC
ACGTTACTGCCCATAACCGGGCGGTTAATGATATTTCAGCCCTCTGAAGC
CTGACGCGGTAATGAAAATTTGAGTCACTTTCATTACCGCCCGCCGATTG
AATCTTTAATGGCTTACTTAATGACCGCTATATGGATAAAAATAGCTATT
TGTAAGAACAAAGGAAACTTTCGATTTTTGCTCACTTTGAGCATGATGAG
TGACGTCATCAAAAAATTTTCAAATTTCATCCACAATGATCCTCTAGATC
AAAAGTTACAGGAACAGCTCCGCCCTAGTTTTGAACCGCCCCAAAAGCCT
ACTATGAATAGCAAATTCAAGAGCTTTCCGAAATGTTTTCGGAGACCCGC
GAACAAGATTTTAAATTTAATGATTCCGGTGTTCTAATTATTTCAGGGCG
AGTTGGGCCAGGGGACACTGGCTGGATGCACGATACTTTATTCGATGATT
TGGGACCTTTTGCATATCATTCAGCTGTTCATGATGGTTTCGGATATTTG
AAAACAAACCATAATTCTGGTCCTGGATATTGTTATTTGAACAAAGGAAT
TTTTGGTGATTGGAGTCCTTTTGGAGGACAAGCTTTTGGGCTTGGATTTT
GGACAGAGATCTGTGACAGAGAATGCCCTGCCAAAGCTCCAGTAGAAAGC
TTTATTTTTAAATAA Coding sequence (CDS) from alignment at sc0000847_pilon:6512..10126- >XLOC_038810 ID=XLOC_038810|Name=XLOC_038810|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1602bp|location=Sequence derived from alignment at sc0000847_pilon:6512..10126- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATTGGATATCAGTTAAAAGAGGTCAAGAAAATGTTGGAGCAGT
CAAGAATTATTGCGAATCTGTTGTTTTTGTCAGGTTTTATGGACAGACGA
ATAGTATGAAGATGGGAAATTGGATATCAGTTAAAAGAGGTCAAGAAAAT
GTTGGAGCAGTCAAGAATTATTGCGAATCTGTTGTTTTTGTCAGGTTTTA
TGGACAGACGAATAGTATGAAGGGTCCTCAAGACCATGAAGAAGTGGACG
GCCCTGATCATCACCCCAAAACACAACTCGGACACATTCTCAATAAACTC
GATCAAGAAATTCGAAAAGCATCTGCTGCACATCAACTCGAAATAACAGA
TGAATTCAAAGAGCTTTTGCGGGATGTTGCTAAATCCAGGGTGTGCACAA
AAGAATGCGAAAATGAAGAAGAATGTCATAACAGGTTATTGGGAGATGCA
GAGAAATTTGTTGAAATATATAAGAAACGTGGATGGTCCTCAAGACCATG
AAGAAGTGGACGGCCCTGATCATCACCCCAAAACACAACTCGGACACATT
CTCAATAAACTCGATCAAGAAATTCGAAAAGCATCTGCTGCACATCAACT
CGAAATAACAGATGAATTCAAAGAGCTTTTGCGGGATGTTGCTAAATCCA
GGGTGTGCACAAAAGAATGCGAAAATGAAGAAGAATGTCATAACAGGTTA
TTGGGAGATGCAGAGAAATTTGTTGAAATATATAAGAAACGTGGATGTGA
ATCGGAAGTTCTTCATCAAGACCATTCATTTTATTGGGGAACGCGACAGC
AAATGTTGTTTGGCAAAGTGATCGTTGATTGGCTACCTGAACACATCGAG
ACAAAAACTCCACCTATGGATCCGATCTTTGGAACGCTGTTGAACCCTAC
TGGAGGTGAATCGGAAGTTCTTCATCAAGACCATTCATTTTATTGGGGAA
CGCGACAGCAAATGTTGTTTGGCAAAGTGATCGTTGATTGGCTACCTGAA
CACATCGAGACAAAAACTCCACCTATGGATCCGATCTTTGGAACGCTGTT
GAACCCTACTGGAGGGCGAGTTGGGCCAGGGGACACTGGCTGGATGCACG
ATACTTTATTCGATGATTTGGGACCTTTTGCATATCATTCAGCTGTTCAT
GATGGTTTCGGATATTTGAAAACAAACCATAATTCTGGTCCTGGATATTG
TTATTTGAACAAAGGAATTTTTGGTGATTGGAGTCCTTTTGGAGGACAAG
CTTTTGGGCTTGGATTTTGGACAGAGATCTGTGACAGAGAATGCCCTGCC
AAAGCTCCAGTAGAAAGCTTTATTTTTAAATAAGGCGAGTTGGGCCAGGG
GACACTGGCTGGATGCACGATACTTTATTCGATGATTTGGGACCTTTTGC
ATATCATTCAGCTGTTCATGATGGTTTCGGATATTTGAAAACAAACCATA
ATTCTGGTCCTGGATATTGTTATTTGAACAAAGGAATTTTTGGTGATTGG
AGTCCTTTTGGAGGACAAGCTTTTGGGCTTGGATTTTGGACAGAGATCTG
TGACAGAGAATGCCCTGCCAAAGCTCCAGTAGAAAGCTTTATTTTTAAAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000847_pilon | genome | sc0000847_pilon:6512..10126 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 535-801:268 |
| Aaloc | 376-531:2222 |
| Aaloc | 112-372:3291 |
| Aaloc | 1-111:3616 |
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