XLOC_045357 (mRNA) -

Overview
NameXLOC_045357
Unique NameXLOC_045357
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000031_pilon:889285..890760-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045357 ID=XLOC_045357|Name=XLOC_045357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1476bp|location=Sequence derived from alignment at sc0000031_pilon:889285..890760- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGTTCTCTTAAATCTGATAAAAACAAGCAAAGAAATAACAAAGCCCCT TGCGGGAAGATTAAAATATTTTTCGGAAAACTGGGAGAAACTTACAACAG ACCAGTGGATATTACAAACAATCAGGGGAATGACACTAGACCTAATAAAT ATTCCAAGGCAAAAAGTCTCTCCAAAAGACATAAACATGCCAAAAGAACA GAGAGAACTTGTAGACCTGGAGATAACAGAACTTTTGAGAAAGGGAGCAA TTTACCCTGTAAAAGCAGAGACAGGCCAATTCGTGAGCACAATCTTTCTA AGGGAAAAGAAAAACGGGAAACAAAGACCAATAATAAATCTAAAGAATCT AAACTCCTACATTGTGTACGAAAAATTCAAAATGGAGGGGTTAAAACAAA TGACAGAGATGTTAAAAAAGGGAGATTTAATGGTGAAGTTGGACATGAAA GATGCCTACTTCAACCTTCCAATCCGCTCAGATTATCGGAAATTTGTGAG GTTTACCTGGAAAGGTTGCCTGTACGAGTTTGCCTGTCTCTGCTTCGGAC TTGCACCAGGCCCAAGAATATTTACAAAAATTTTGAAAGTCCCTGTTCAG TTTCTACGCAGGCTGAACATCCGGCTAGTAATTTACTTAGACGACATACT GGTCATGGGGGAAAACCTAGAAACCGTACTCCAGGCCAGGGATACGATCA TTTACCTCCTTCAAAACTTGGGGTTTGTAATAAATCAGGAGAAATCAGTG ATGGAACCTACAGTGGAAATAGAATTTTTGGGAATGTTAATAAATTCAGA GGAAATGACTATCTCCTTACCAGAGGAAAAAATAGAGAACATAGTGGGAC TCTGCCAAAAAGTTTTGCAGTCAAAGGAAATAACCCTCAGGGAACTTTCG AAACTGATAGGAAAATTGACTTCCACTTATGCGGCAGTTCTCCCTGCCCC ATTGAATTGCAAATTCTTGCAAATGAACCTAATAAAGGGCTTAAAAAATC AACTGAGCTACGAGACAACAGTCAAGTTAGATCGGCAAGGGAAATTGGAA TTAGATTGGTGGATAGAGAACCTAAAACTCCAGAACGGGAGAAAAATCAA TTTGGGCCCACCAGACCTAATAATTCAATCGGACGCGGCCAAAACAGGGG GATGGGGAGCCCATTGCCAAGGAAAAAAGACAGGGGGCCAATGGAACCAA TGGGAAAACCAGCAACACATAAACATTCAAGAAACGATAGCAGCAGAACT TGCAATAAGGACTTTTACAAAATTGAAAAAGCCCAAAAGACTGCACCTTC AGATAGACAACACAGTAGCCTTGAGTTGTATATTGAAGATGGGCAGCACC AAAAACGAGATTCTGACCCAGTATGCGAAAAGGATTTGGGATTACCTTCT AAAACACCAGATCATGATTACTGTGGAGTACCTCCCAAGTCACCTGAACA AAGAGGCGGACAGGGAATCCAGACGG

Coding sequence (CDS) from alignment at sc0000031_pilon:889285..890760-

>XLOC_045357 ID=XLOC_045357|Name=XLOC_045357|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000031_pilon:889285..890760- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGTTCTCTTAAATCTGATAAAAACAAGCAAAGAAATAACAAAGCCCCT
TGCGGGAAGATTAAAATATTTTTCGGAAAACTGGGAGAAACTTACAACAG
ACCAGTGGATATTACAAACAATCAGGGGAATGACACTAGACCTAATAAAT
ATTCCAAGGCAAAAAGTCTCTCCAAAAGACATAAACATGCCAAAAGAACA
GAGAGAACTTGTAGACCTGGAGATAACAGAACTTTTGAGAAAGGGAGCAA
TTTACCCTGTAAAAGCAGAGACAGGCCAATTCGTGAGCACAATCTTTCTA
AGGGAAAAGAAAAACGGGAAACAAAGACCAATAATAAATCTAAAGAATCT
AAACTCCTACATTGTGTACGAAAAATTCAAAATGGAGGGGTTAAAACAAA
TGACAGAGATGTTAAAAAAGGGAGATTTAATGGTGAAGTTGGACATGAAA
GATGCCTACTTCAACCTTCCAATCCGCTCAGATTATCGGAAATTTGTGAG
GTTTACCTGGAAAGGTTGCCTGTACGAGTTTGCCTGTCTCTGCTTCGGAC
TTGCACCAGGCCCAAGAATATTTACAAAAATTTTGAAAGTCCCTGTTCAG
TTTCTACGCAGGCTGAACATCCGGCTAGTAATTTACTTAGACGACATACT
GGTCATGGGGGAAAACCTAGAAACCGTACTCCAGGCCAGGGATACGATCA
TTTACCTCCTTCAAAACTTGGGGTTTGTAATAAATCAGGAGAAATCAGTG
ATGGAACCTACAGTGGAAATAGAATTTTTGGGAATGTTAATAAATTCAGA
GGAAATGACTATCTCCTTACCAGAGGAAAAAATAGAGAACATAGTGGGAC
TCTGCCAAAAAGTTTTGCAGTCAAAGGAAATAACCCTCAGGGAACTTTCG
AAACTGATAGGAAAATTGACTTCCACTTATGCGGCAGTTCTCCCTGCCCC
ATTGAATTGCAAATTCTTGCAAATGAACCTAATAAAGGGCTTAAAAAATC
AACTGAGCTACGAGACAACAGTCAAGTTAGATCGGCAAGGGAAATTGGAA
TTAGATTGGTGGATAGAGAACCTAAAACTCCAGAACGGGAGAAAAATCAA
TTTGGGCCCACCAGACCTAATAATTCAATCGGACGCGGCCAAAACAGGGG
GATGGGGAGCCCATTGCCAAGGAAAAAAGACAGGGGGCCAATGGAACCAA
TGGGAAAACCAGCAACACATAAACATTCAAGAAACGATAGCAGCAGAACT
TGCAATAAGGACTTTTACAAAATTGAAAAAGCCCAAAAGACTGCACCTTC
AGATAGACAACACAGTAGCCTTGAGTTGTATATTGAAGATGGGCAGCACC
AAAAACGAGATTCTGACCCAGTATGCGAAAAGGATTTGGGATTACCTTCT
AAAACACCAGATCATGATTACTGTGGAGTACCTCCCAAGTCACCTGAACA
AAGAGGCGGACAGGGAATCCAGACGGCCTGTTCTCTTAAATCTGATAAAA
ACAAGCAAAGAAATAACAAAGCCCCTTGCGGGAAGATTAAAATATTTTTC
GGAAAACTGGGAGAAACTTACAACAGACCAGTGGATATTACAAACAATCA
GGGGAATGACACTAGACCTAATAAATATTCCAAGGCAAAAAGTCTCTCCA
AAAGACATAAACATGCCAAAAGAACAGAGAGAACTTGTAGACCTGGAGAT
AACAGAACTTTTGAGAAAGGGAGCAATTTACCCTGTAAAAGCAGAGACAG
GCCAATTCGTGAGCACAATCTTTCTAAGGGAAAAGAAAAACGGGAAACAA
AGACCAATAATAAATCTAAAGAATCTAAACTCCTACATTGTGTACGAAAA
ATTCAAAATGGAGGGGTTAAAACAAATGACAGAGATGTTAAAAAAGGGAG
ATTTAATGGTGAAGTTGGACATGAAAGATGCCTACTTCAACCTTCCAATC
CGCTCAGATTATCGGAAATTTGTGAGGTTTACCTGGAAAGGTTGCCTGTA
CGAGTTTGCCTGTCTCTGCTTCGGACTTGCACCAGGCCCAAGAATATTTA
CAAAAATTTTGAAAGTCCCTGTTCAGTTTCTACGCAGGCTGAACATCCGG
CTAGTAATTTACTTAGACGACATACTGGTCATGGGGGAAAACCTAGAAAC
CGTACTCCAGGCCAGGGATACGATCATTTACCTCCTTCAAAACTTGGGGT
TTGTAATAAATCAGGAGAAATCAGTGATGGAACCTACAGTGGAAATAGAA
TTTTTGGGAATGTTAATAAATTCAGAGGAAATGACTATCTCCTTACCAGA
GGAAAAAATAGAGAACATAGTGGGACTCTGCCAAAAAGTTTTGCAGTCAA
AGGAAATAACCCTCAGGGAACTTTCGAAACTGATAGGAAAATTGACTTCC
ACTTATGCGGCAGTTCTCCCTGCCCCATTGAATTGCAAATTCTTGCAAAT
GAACCTAATAAAGGGCTTAAAAAATCAACTGAGCTACGAGACAACAGTCA
AGTTAGATCGGCAAGGGAAATTGGAATTAGATTGGTGGATAGAGAACCTA
AAACTCCAGAACGGGAGAAAAATCAATTTGGGCCCACCAGACCTAATAAT
TCAATCGGACGCGGCCAAAACAGGGGGATGGGGAGCCCATTGCCAAGGAA
AAAAGACAGGGGGCCAATGGAACCAATGGGAAAACCAGCAACACATAAAC
ATTCAAGAAACGATAGCAGCAGAACTTGCAATAAGGACTTTTACAAAATT
GAAAAAGCCCAAAAGACTGCACCTTCAGATAGACAACACAGTAGCCTTGA
GTTGTATATTGAAGATGGGCAGCACCAAAAACGAGATTCTGACCCAGTAT
GCGAAAAGGATTTGGGATTACCTTCTAAAACACCAGATCATGATTACTGT
GGAGTACCTCCCAAGTCACCTGAACAAAGAGGCGGACAGGGAATCCAGAC
GG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_045357XLOC_045357-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031_pilongenomesc0000031_pilon:889285..890760 -
Properties
Property NameValue
Aaloc1-1476:1477