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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000285_pilon:84428..87453- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011688 ID=XLOC_011688|Name=XLOC_011688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3026bp|location=Sequence derived from alignment at sc0000285_pilon:84428..87453- (Clytia hemisphaerica_ch_hm2_pilon)
CAGACTGAATGTGTTGCTAAGCATATTGAAATAATGGACTTCAACGTTAC
CTTTTTTGTCATGTCAGCCGATAGAGAAAGAGTGGAAAAACGGCTGAGAA
GAAGCCAAGTGACAGTGGAAAGGCTGTCAAGAATGTTTGGTGTAAGTATT
TACACGTGACTTCCTTTTGATATTTTGGTTTTGGAATAATTTTTCTTCCT
CGCTGGAGATGAAAGTACCGTCGGGATATTTTTGTACAATGTTTTCGAGA
CTCTATCGCAAGGCCAGAAAAAGCACGAAGTTAGTCTTAAAAAAAGAGGA
CTTCGGAGTAACTAAAACAAATCTTTTTAGCTAATAGCAAAAATACTGTG
TCCCTTTAAAATTTTTACAAAGCTTTTTTTCACGTGCACATTTCTTTATA
AACAAGGCTTGACTGTAAAATCATTTATCTCTTACGCATTCAGTATGATT
TTCTAATATACATGTGTGAAAACTTAAATCTTTAATTTTTTTTCCAGTTC
ACGCGTGAATCACTGTATGTCACTGAGGAATACAATGGAACGTCCGAATT
CCCAGATGCCGAAGGAAGTTTTGCGTTTCTCGAAGAAACAATCTATAAAG
TAGAGGGTGAAAGACTACATCAACAAGCAGCACAGCCAACCCCTGCTCAG
CCCGCTCAGCCTGCTGACGTAGCAGAAGACTTTGGAGCATTTAGACAATT
TAACTTGCCACCTGGGTAAGTTATTTTTATTAACAGCAAGGCCGTGCCTT
AAGGGAAGAAATTTTCGTGAGAAGATATTTTGGCGGAATGTACTTTTGCG
AATTAAAGGAAATTCATTTTATTTTCCTAATAGGTACAAGCTAATATGAT
GAATTTCGCGGAAAAAATTTTCGCGATTGCCCAAATTTTATATTTTGCGG
AATTTATTTTCGCGAATTTCCTATTTCAAAAGAATTCGTGGAATTTTCGC
TAAAAAGGTGCAAATTCGCGAAAATAGCTTCTCGCGAAAATTTCTTCCCT
TATGGTAAGAGGGGGAGGGGGGCTAACGCTTATAGTGACAGGGTATTGAC
ACGGGTATTGAGACCACGAGGGCCATACATGGTTTCACCCGAGGGGGCGA
TAATTTGAAGTTTTATCTCTCTAGATAAAAAACTTTTTTTCAAAATACCA
TTTTTGAAAGATTTATGGACAGGAAGTAAGTTTTGAAGCTACATTAAGCT
AGTTCACTGCTATTCATACTTATTTTTTAAGAAAAACTTTAAACGGGAAA
ATACGAGCTGGAAACATTTTGAGATTCATTTCTGCATCAACAATCTTTAA
TTTATACATTTTTCGTTTTATTCAGGCCCTCCAGAAAAAGGCCAAAATCA
TCGATTGTTTTCTTTCTGAAAGTATTCCTTGGAAAGCTTGAGGGCAAGAA
AATTGGTAAGGAAAAAATATTTGTTTTCGGGGAGAAATAAACCTAATGAA
AGTGACCTTTAAAAATTGAACACTTAAGTTGAACATTTCATAAATTGTTT
TTGCAATATCAACACTGTTAATCTTTAATCATTCAGTTCCAGGAAGCTTA
ATGACATAATTCATGTCCCTATTGTATTACGAGCTTTACGCTTGGTTTTC
GACCAGAAATTTCTTAAAATCTTCTTATTACCGAATAGACTGAATATCTT
TCTTTTCTTATTTTCAGACTCAAAAAGAATGCAGCTCGTACGCATCACGG
ACGAAAACTCTAACGTGGCCAAAATTACCGAGATGGTGAGAGAGGTGTTT
GATGATGAGTCTCTAGTACTTGTCGAGGCAAACGGTTGTCCGTTCGAGGA
TTCAGCGGTTACAAGAGGTATTTAACTTTTTTCTATGTTGTCTCTTTTAA
ATCTTTACACAGGCATAAGAAAAACCTATAATGAGTCTTGCTCCACATTT
CTCTATCCATTACAAAAATTCATTTTCATTTGCATCTTACATGTAAAATC
ATATACATATGTAAAATCACACCGTGTATTTCTAGCTTTAAGAATATTTT
AGGATGAGTTTTCGACAAAAAAGTTAAGAATATACATTATGAAATGAAAA
AAAAATTAAAGAATTCTTATAAAAAAGCACGTTTGTAAGGTTTATATGTA
TACTTATGGTGCAATTTGGGATATGTCAAAAACTTTTTCTGGTTTTGTTT
ACAAAACTTTTGCATTATATAAAATCATAAGTAGGAATTTTTCTACTTGT
GTGTAAAATCATATATGATTTTATGAAAGCGGCTTCAGCCAATCAGATTG
AGTCTTTACTTATGGCAAGCGAGGGGAGAAAAAAATCGCCTGAAACAGAA
AGAATACGTAATTTTTATTTATTAAAAAATATTTTAAAAAGCGTGTAGCA
ACCAAACCCTTATTCACTTTTGATACACGATTTTACTTTTATAAAAATAT
CTTCTATGAGAATATCAAGTCGTGATTTAGGATTTAGAACAACAGGTTTA
TTGTTTAGAAATAAGACCCATAACAAAAAAGCACTACTGTATGCTGATAA
GAAATAAAGCGTGAAACAATAGTCGTATCCTCGTTGTCTATTAAAGTTTC
TTTTGTAATTTTCTCCAGAATTCGTCTACTGGAAAGTGAGTGCCAGAAAA
GTCTACGCGGTCCCACGTGAAGAACTCGATCGAAGAAATGAACGGGCAAA
TGGATCAAATTCGACAAGCCAGGTTGACGAGCAACGACAACAACAGCTTC
ATATGGACCTCACTTCAAAGATATCTGGGATGGAGCTCAATATCCAAAAT
GGAATCGAAAGAAGTACACAGCAACTGCAAGAATCAATTTCCACAATAAG
GCTTGTTGGGCCACTCAAAGATGCGTTACGATGCCTTTATTGCAGAGGTA
CCTCCAGACCCCCAGTGATCTACGGGCTCTGTTGTGGTCAAGTTATTGGT
TGTGGAGAGTGTCATTTACACTACGATGGCGAGACGTGTATTCATTGTAG
GAGTAATGAGTTTTCGACCATTCAACTACGCTTTTTTGATGCATTACTCG
AAATAATGCACCAACTCAACATGTGA Coding sequence (CDS) from alignment at sc0000285_pilon:84428..87453- >XLOC_011688 ID=XLOC_011688|Name=XLOC_011688|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2094bp|location=Sequence derived from alignment at sc0000285_pilon:84428..87453- (Clytia hemisphaerica_ch_hm2_pilon)
CAGACTGAATGTGTTGCTAAGCATATTGAAATAATGGACTTCAACGTTAC
CTTTTTTGTCATGTCAGCCGATAGAGAAAGAGTGGAAAAACGGCTGAGAA
GAAGCCAAGTGACAGTGGAAAGGCTGTCAAGAATGTTTGGTCAGACTGAA
TGTGTTGCTAAGCATATTGAAATAATGGACTTCAACGTTACCTTTTTTGT
CATGTCAGCCGATAGAGAAAGAGTGGAAAAACGGCTGAGAAGAAGCCAAG
TGACAGTGGAAAGGCTGTCAAGAATGTTTGGTTTCACGCGTGAATCACTG
TATGTCACTGAGGAATACAATGGAACGTCCGAATTCCCAGATGCCGAAGG
AAGTTTTGCGTTTCTCGAAGAAACAATCTATAAAGTAGAGGGTGAAAGAC
TACATCAACAAGCAGCACAGCCAACCCCTGCTCAGCCCGCTCAGCCTGCT
GACGTAGCAGAAGACTTTGGAGCATTTAGACAATTTAACTTGCCACCTGG
TTCACGCGTGAATCACTGTATGTCACTGAGGAATACAATGGAACGTCCGA
ATTCCCAGATGCCGAAGGAAGTTTTGCGTTTCTCGAAGAAACAATCTATA
AAGTAGAGGGTGAAAGACTACATCAACAAGCAGCACAGCCAACCCCTGCT
CAGCCCGCTCAGCCTGCTGACGTAGCAGAAGACTTTGGAGCATTTAGACA
ATTTAACTTGCCACCTGGGCCCTCCAGAAAAAGGCCAAAATCATCGATTG
TTTTCTTTCTGAAAGTATTCCTTGGAAAGCTTGAGGGCAAGAAAATTGGC
CCTCCAGAAAAAGGCCAAAATCATCGATTGTTTTCTTTCTGAAAGTATTC
CTTGGAAAGCTTGAGGGCAAGAAAATTGACTCAAAAAGAATGCAGCTCGT
ACGCATCACGGACGAAAACTCTAACGTGGCCAAAATTACCGAGATGGTGA
GAGAGGTGTTTGATGATGAGTCTCTAGTACTTGTCGAGGCAAACGGTTGT
CCGTTCGAGGATTCAGCGGTTACAAGAGACTCAAAAAGAATGCAGCTCGT
ACGCATCACGGACGAAAACTCTAACGTGGCCAAAATTACCGAGATGGTGA
GAGAGGTGTTTGATGATGAGTCTCTAGTACTTGTCGAGGCAAACGGTTGT
CCGTTCGAGGATTCAGCGGTTACAAGAGAATTCGTCTACTGGAAAGTGAG
TGCCAGAAAAGTCTACGCGGTCCCACGTGAAGAACTCGATCGAAGAAATG
AACGGGCAAATGGATCAAATTCGACAAGCCAGGTTGACGAGCAACGACAA
CAACAGCTTCATATGGACCTCACTTCAAAGATATCTGGGATGGAGCTCAA
TATCCAAAATGGAATCGAAAGAAGTACACAGCAACTGCAAGAATCAATTT
CCACAATAAGGCTTGTTGGGCCACTCAAAGATGCGTTACGATGCCTTTAT
TGCAGAGGTACCTCCAGACCCCCAGTGATCTACGGGCTCTGTTGTGGTCA
AGTTATTGGTTGTGGAGAGTGTCATTTACACTACGATGGCGAGACGTGTA
TTCATTGTAGGAGTAATGAGTTTTCGACCATTCAACTACGCTTTTTTGAT
GCATTACTCGAAATAATGCACCAACTCAACATGTGAAATTCGTCTACTGG
AAAGTGAGTGCCAGAAAAGTCTACGCGGTCCCACGTGAAGAACTCGATCG
AAGAAATGAACGGGCAAATGGATCAAATTCGACAAGCCAGGTTGACGAGC
AACGACAACAACAGCTTCATATGGACCTCACTTCAAAGATATCTGGGATG
GAGCTCAATATCCAAAATGGAATCGAAAGAAGTACACAGCAACTGCAAGA
ATCAATTTCCACAATAAGGCTTGTTGGGCCACTCAAAGATGCGTTACGAT
GCCTTTATTGCAGAGGTACCTCCAGACCCCCAGTGATCTACGGGCTCTGT
TGTGGTCAAGTTATTGGTTGTGGAGAGTGTCATTTACACTACGATGGCGA
GACGTGTATTCATTGTAGGAGTAATGAGTTTTCGACCATTCAACTACGCT
TTTTTGATGCATTACTCGAAATAATGCACCAACTCAACATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000285_pilon | genome | sc0000285_pilon:84428..87453 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 592-1047:457 |
| Aaloc | 442-588:1358 |
| Aaloc | 361-438:1701 |
| Aaloc | 142-357:2530 |
| Aaloc | 1-141:3027 |
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