|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000296_pilon:199862..206136+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033024 ID=XLOC_033024|Name=XLOC_033024|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6275bp|location=Sequence derived from alignment at sc0000296_pilon:199862..206136+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAACTGTTGCTGGTCGAAGAAACTCTTCAAAGTAACATGCTTTT
CATGGAAGGAGACGAAGAGATAATTGGAGAAGAGGAGATTTTATCAACAG
GACCTTTAATTGCTCTTCAGCCATCAAGTGTAGATCATTTGATTGACCCA
AATATAGAGGTAATCGAAGAAGTTATTGACCAATCTTATGTTGATGATGT
TCCGGTTATTGCACAAGAACAAGAGATTTCAACAGATGTACAGCCTCAGC
AACAACCAAACAATAAGAAAAGAAAGCTTAAAGGTAGTAAACCAAATTTC
TTAAAGAAGTCTAAGGGAGCTGATGGCGAAGAAGGAACAAGTGAAATTGA
TGTTCCCAGAAAGTGGGAGCGgaagaaaattcaaatcaaGACACTAGAAG
GAGAATTTTCTGTTACAGTTTGGGCATCAGGtataatgttgtttttattg
caGTAATTCAACAAATAGTCTAGTTCTAAAACTCTAAATAGAAGTGCATC
TAGCAGTATAGCCCTAACTCTTCCATACCGtggtgagaggtcctaaagcc
gacagcccagcctaattccgaccccccaaataactgttatgaaaaaaaat
tctatgtttacaaacattccctctccaagttgaacgataaactattgcta
gaactctcgaaacaaaacatctaacaagatagctgtaatgtcaagatgtc
aattaatgtaattaaaaagtacaagttgtaaaaataattaccttttattc
tggatcagttgctcatgtttaaaacgataacagttttgtaataaaagtga
cttgtgcgggaaaaaatacgaaacaacttggactggtttccatcaagaaa
caaacagactaaattgtaaaaatggcgcgaagttgaaaaaaggacGAATG
tggtagcactaatttgaataacaaacatcgaatcaatgaggcggcaacta
tcgacgccctctttaccacctatacagtaagtccggatgtttatttacga
aaggcccgcaatcggacagctcttcatttaagtgtactctttgacgacat
atattatctttacaagcaaggtgtcatgtaatacataataattgtaatat
acgtcgtctatttgtattcttatcctgtaatatataatataatgtaatat
acgtcgtctatatgtatccttacacaaagtcctagccccgcaatcaagcc
aagtgccagtgaaaagtaatagaaaccaggcttgattacgtaacgtttca
aaatgagcacgctcgtacacagacctcttttatatttccgtgtgctttgg
aaaatcaaaacatctcgttactttttatgatgctgctactactgttgtca
tttatgacgttgtgcatattgcaataaaaaaatatgttttgttataagaa
gcaattattgttatttggttcaattggttcaatgtatcaaatctctcagt
ttagttgacactttggtatcttcgttgcgtcacagcgaaaggtttgtttt
tattttagtttgtatctttgaaagaccccatcggctttaggctgggctgt
cggctttaggacctctcacggtactgTATGATTTTTAGGACCTTCCCCTG
GCACTCTGGTCTGGTCCCCCGGAGCAAAAAGTGCTGTTTTTTCCTTGCTC
TGGAACACCAGATGATTCTGGAGCACTTCAACAAACCACAATTTTTGGCG
ACTGGTCGGCACCAGAACTCCAGAACACCGGAACTCCGGAacggttggca
gacgatatcatactccaggatgcaagtgaaatttttcaatccgcggacct
agacgggggtttggttattatcagttagggttagggttggagctcgagag
tcacaatataaggccgaaggccttcttaggggcattcgtaccctgtgact
taCCTTAGGATCCCGTagagggatccttgtaggggcaccggtagggttgg
gagctttcttaattaaggtctgtaaattacacgctataagtatttgtgaa
tgacggCTTTCTGGTCTGTCTCGTTGGCGTaagcggttaggcattgggta
GTGCCATTGAAATTCCAAAACTTTGAAAGTTTCTCTTTGTCTTTTTAAGA
CATCCTTGATGACATTCTCACAcagtttcaaagtttttttcatgttttga
tgaaACCCAGATGGGgtgctgaaagtttgaatttcttaAGAGAGGGGTTG
CCAGTTAGAgggggggggTCACTTCCTACTTCATAAAATTATgtacaaat
tcaaaattgtttcttttcaacaaaaatatcaCGCATCTCTATAAAATTGC
CTTTAGAGTGATGGGTCGAAACCATTGCATAAAGGGGGTCGAACTGAAAC
TTCTATATAATTTCCTATGGGGaggaatcaaaatttcaaatgtatTTCCT
AAGGGTTCATACGGGTTCTCCCTTCCTAATAGAGTGGGGGGTTATATCAA
TGTATGACAAGGTTTCCACCAAAACTAACCAAAGgcaaatagaatttcta
ttgcACTAATTTCCTAATTTTGCACTGATTTTTTGCCTGACCACTTTTCT
GTCCACCCTGTATGGCTCATGTCATATGTCTAAAAGATGTAGAAGTTATT
TCTTATATCTATGTGCCTTTGAATATTTGTTTTTCACGATGTCTGCTAGT
AGTAGTAGTATCTTACAAAACTTATCTGAGAGCCATGTCAACTGAGTatc
caaaaaccttgaaaagtgccaaaatgtttaccaaaaaaccttgaaaaaac
actttaaaatgaccaaaaaaccttgaaaactttgaaaatcctgaaaaaaa
aaccgTAGACACCCTGTCAAAATAGACAAAGATCGTTTATGACCCCTGTC
TCAGATGAGGCTTTCAGGCTTTATCTAAAGATAGAGAACTAAAACAAGCT
TGACCCACTAAACTATATATTTAGCACCAGACTCTCTGACAATCTGAGAA
ATTATTTGCCCGGGAAGAGCAGCAGATTTCAGCGAAATGCTGCTTTTTGC
TCTGAAAGTGTATGGTGGAAATGGTCTGAAATGGTGcttgttttcaaact
taaacatcaattcatttgaaatattttctttatttggattattgaaaggt
taaaggtttgttttatttttattttttgatgatagcTTCACTCAATCACT
TACAATgagcttttgaaatttgtttattttgtattctGCTTGCTCTCGCA
TGATGCCGCCTTTATGGAGttttttttGGCGTCTGCTAAATGCGATTTCG
TGCACTTTCGCTCACTGTGCACacacgtattttttttaaatcagccGACT
CATGGTAGTTTCAATATTTCGACCAGTGATGCTTTCGAATATagcaaaaa
tacaaagttaaaaaaaaaaatggtagagtaattTGGGAGCTGaactgcgt
agttcatttgtttttaaattttgctgctttaatTGGTCTGTCATTTGATG
GcttgcaagtttccctccactgatgcaagttatagAACTTCATATAGAAC
TTAGCTACAGCAGATGATTTTGAttgaagttgttggaatgtttacaaagg
ctctTGACAGGCTTTTTTATACTGTCAATCTGGCtttttttAAGCCATTA
CCTTTGGGTACTTTGCCAACCTCCCCTACTGAAAGcctatttatttttga
aaaaagtttccttGGGATAACAGTTTAATGGTAAATTCTATTTattctta
taatttttatagAAGACAAAACTGAGGAACAAGATAACCCAGAAGAAACG
ATAGAAGAAATTCAATCGTCCATCATTGTTGAAGAACAAAAGGAACCCGA
ACACGTGGAACAAATAGAACAACATcaagaccagaaacaagctgaaaaga
aaaaagagaaaccagcgagcaaagttagaaaaacaagcgaaagtagaaat
aaaTCTTCTGATGGACCAAAGtaagtttcttcttttttactCTATAACTT
GGTTAGCAAAATCTTCAGAATTGTGTGGAATATTTCTTTCAAAGTAACAG
GAAGAGAATTTGGATCACTTCGaaaaaaaTTACCTATGTTAGAGACCTTT
TCAAATTTGGTAAATTGTCTTCTTTTTAAAAGTCAATAATATCTTGCAAA
ATTTATTTGTATGTCTGATGATTGGATCGTTGTAAGGCATGAAACTTGaa
gttattttattttatttttaacttcGAAATCTTGAACTAAATTCATCTTG
AGAAGTTGGTTAATAGTGATAAGGTTTGCTCTAAATTCTGTTTTCAAAGG
CTtctgaaaaatattccaaaagaAGGGAAGATTTCTTGCCAACATCCCTT
AAACAATGTGCTGTGTTCTTTTGCCTATTGAAAATTATTGGCAATTATTT
AGCGTTTGATTTTTAGTAAAGGGCAAAATGATGgatttacagatttttca
gGTTATTTCAAGAACAACTTCTGGCAGCTCTCACaaactttcactacttt
tttatttaatattatttttattaaatacatctaatttgattgaattaagc
taaaaagtctttatcttttttatttcaggaaaagcAAAAAGTCATCTAAA
CCTAAGGATGCAGCAGCCCCAGCTAAAAACATTACCTGTCAACATCCAGT
AAGttgttattgttttcatttttatcaacaGAGTACCAAATTTTAAGCTA
TTCATAATTCACTCTATGCTCAACTAGCGCTTAGCTGCCGAAATTGACAG
CGATATTGAGTTGCAAGAAAATGTACATTTAATTCATGATCTTACTGCCT
AGATCGGCAGACGACTagaaatcctaaaaaaaaatacaaaacaagtCTCA
TACCATAAAACTCTGCTCGTGGAGCTATGGTGAATAAGATGGAAATGTAA
ACACCTACATCATATTTTGATAGAAGTCTTTTTATTTGTTATTCTTGATT
TCAGGGGTGTGGAAAAGTGTTTCGAGATAATTCGGCAATGAGAAAACATC
TTCATACACATGGGCCAAGAGTTCATGTTTGCGCAGAATGTGGAAAGGTA
AAAATAATCTCCttttatatcaattttggcCGGGTTGGTCAGTTGGTAGG
ACATTCCCTGTACAATCCAAGTGTTGTGGGTTTGATCCCCGGTTACCGCC
AACTCATtgaatgagtagcttagattgggtaatttGATCTAGGCGATAAG
TTAcagggagctgagagtaggtgtgtcGCGCCACCTCAGCATTTGACCTC
CCGGCCCCAAACCTCCCTCCTTTACTTTACTTATTCCAATCGTTTCAAAC
TTTActgaaagttttccaaataCAATTATTTCAGAATTTACAATTTTAGT
GTTCATCTCATTCGggatcttttgttttaaattttgcaacTCGACTGTCA
AATTATCAGAATTTTTCCTTGAATATTTGAATATCTGTAATATCTACAAT
ACAATATGTGTAACtttttttACCAGGCCTTTGTAGAGAGCTCCAAATTG
AAACGTCACCAGTTGGTACACACAGGAGAAAAGCCTTTCCAGgtaataat
atttattttttagttaACTTAACCTCTACTTTACTTATCTATTCTACCTC
TAAGCTCGAAATTGTGGATTTCCTCGTTTTGAGTGCTAAAACATAGGGAT
GTGTAACACCAGCACACTTAGCAGAATAAACAATTGCTTTTCcataactt
tttcattttgtgtAATTTGAACgaacaacaaaaatatttaaatgagAGCC
TAGTGAATGAAAACCTTAGtacaaacaaaaatgtttcgTTTTCTGCTTTC
AGGCTGGATAGAAACTTTCAGATATTTAGATGGGTAGATGGGGTTTAGAT
TCAGTTTGTCAGTTGTTTTGGAGATTCAAAATATCCGAAAACAACAAATG
CTCAAAAACTCATAGAAGGCATATTTCATAGGGCAAAACTTTAACCGCTC
TTTATAAGACTGTTATTtaaattgttgaatttttataatttcttttagTG
TACTTTCGAAGGCTGTGGTAAACGATTCAGTTTAGATTTCAATCTACGTA
CTCATGTTCGAATACATACTGGCGACAAACCGTACGTTTGTCCTTTTGAT
TCATGCAACAAACGATTTGCACAATCTACAAACTTAAAATCACACATATT
GACTCATGCTAAATCCAATACAAATTCCAAAGGTGCTAACAATGCTAGTA
AACATCAACCGTCTATCGAGGAGAGCATACCTTTAGAATCTCAATTCTCT
TCTTCAATCaccaatgaagatgaagatgaagatgaagatcttggtgatga
agatctggtgattcaagaagaatga Coding sequence (CDS) from alignment at sc0000296_pilon:199862..206136+ >XLOC_033024 ID=XLOC_033024|Name=XLOC_033024|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000296_pilon:199862..206136+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAACTGTTGCTGGTCGAAGAAACTCTTCAAAGTAACATGCTTTT
CATGGAAGGAGACGAAGAGATAATTGGAGAAGAGGAGATTTTATCAACAG
GACCTTTAATTGCTCTTCAGCCATCAAGTGTAGATCATTTGATTGACCCA
AATATAGAGGTAATCGAAGAAGTTATTGACCAATCTTATGTTGATGATGT
TCCGGTTATTGCACAAGAACAAGAGATTTCAACAGATGTACAGCCTCAGC
AACAACCAAACAATAAGAAAAGAAAGCTTAAAGGTAGTAAACCAAATTTC
TTAAAGAAGTCTAAGGGAGCTGATGGCGAAGAAGGAACAAGTGAAATTGA
TGTTCCCAGAAAGTGGGAGCGgaagaaaattcaaatcaaGACACTAGAAG
GAGAATTTTCTGTTACAGTTTGGGCATCAGATGGCTGAACTGTTGCTGGT
CGAAGAAACTCTTCAAAGTAACATGCTTTTCATGGAAGGAGACGAAGAGA
TAATTGGAGAAGAGGAGATTTTATCAACAGGACCTTTAATTGCTCTTCAG
CCATCAAGTGTAGATCATTTGATTGACCCAAATATAGAGGTAATCGAAGA
AGTTATTGACCAATCTTATGTTGATGATGTTCCGGTTATTGCACAAGAAC
AAGAGATTTCAACAGATGTACAGCCTCAGCAACAACCAAACAATAAGAAA
AGAAAGCTTAAAGGTAGTAAACCAAATTTCTTAAAGAAGTCTAAGGGAGC
TGATGGCGAAGAAGGAACAAGTGAAATTGATGTTCCCAGAAAGTGGGAGC
GgaagaaaattcaaatcaaGACACTAGAAGGAGAATTTTCTGTTACAGTT
TGGGCATCAGAAGACAAAACTGAGGAACAAGATAACCCAGAAGAAACGAT
AGAAGAAATTCAATCGTCCATCATTGTTGAAGAACAAAAGGAACCCGAAC
ACGTGGAACAAATAGAACAACATcaagaccagaaacaagctgaaaagaaa
aaagagaaaccagcgagcaaagttagaaaaacaagcgaaagtagaaataa
aTCTTCTGATGGACCAAAAAGACAAAACTGAGGAACAAGATAACCCAGAA
GAAACGATAGAAGAAATTCAATCGTCCATCATTGTTGAAGAACAAAAGGA
ACCCGAACACGTGGAACAAATAGAACAACATcaagaccagaaacaagctg
aaaagaaaaaagagaaaccagcgagcaaagttagaaaaacaagcgaaagt
agaaataaaTCTTCTGATGGACCAAAgaaaagcAAAAAGTCATCTAAACC
TAAGGATGCAGCAGCCCCAGCTAAAAACATTACCTGTCAACATCCAgaaa
agcAAAAAGTCATCTAAACCTAAGGATGCAGCAGCCCCAGCTAAAAACAT
TACCTGTCAACATCCAGGGTGTGGAAAAGTGTTTCGAGATAATTCGGCAA
TGAGAAAACATCTTCATACACATGGGCCAAGAGTTCATGTTTGCGCAGAA
TGTGGAAAGGGGTGTGGAAAAGTGTTTCGAGATAATTCGGCAATGAGAAA
ACATCTTCATACACATGGGCCAAGAGTTCATGTTTGCGCAGAATGTGGAA
AGGCCTTTGTAGAGAGCTCCAAATTGAAACGTCACCAGTTGGTACACACA
GGAGAAAAGCCTTTCCAGGCCTTTGTAGAGAGCTCCAAATTGAAACGTCA
CCAGTTGGTACACACAGGAGAAAAGCCTTTCCAGTGTACTTTCGAAGGCT
GTGGTAAACGATTCAGTTTAGATTTCAATCTACGTACTCATGTTCGAATA
CATACTGGCGACAAACCGTACGTTTGTCCTTTTGATTCATGCAACAAACG
ATTTGCACAATCTACAAACTTAAAATCACACATATTGACTCATGCTAAAT
CCAATACAAATTCCAAAGGTGCTAACAATGCTAGTAAACATCAACCGTCT
ATCGAGGAGAGCATACCTTTAGAATCTCAATTCTCTTCTTCAATCaccaa
tgaagatgaagatgaagatgaagatcttggtgatgaagatctggtgattc
aagaagaatgaTGTACTTTCGAAGGCTGTGGTAAACGATTCAGTTTAGAT
TTCAATCTACGTACTCATGTTCGAATACATACTGGCGACAAACCGTACGT
TTGTCCTTTTGATTCATGCAACAAACGATTTGCACAATCTACAAACTTAA
AATCACACATATTGACTCATGCTAAATCCAATACAAATTCCAAAGGTGCT
AACAATGCTAGTAAACATCAACCGTCTATCGAGGAGAGCATACCTTTAGA
ATCTCAATTCTCTTCTTCAATCaccaatgaagatgaagatgaagatgaag
atcttggtgatgaagatctggtgattcaagaagaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000296_pilon | genome | sc0000296_pilon:199862..206136 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-1194:5949 |
| Aaloc | 802-867:5427 |
| Aaloc | 709-801:4905 |
| Aaloc | 640-708:4530 |
| Aaloc | 433-636:3715 |
| Aaloc | 1-429:1 |
|
