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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:820496..821653- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038954 ID=XLOC_038954|Name=XLOC_038954|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1158bp|location=Sequence derived from alignment at sc0000049_pilon:820496..821653- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCATGTAACACTGATATTCATGATATCAACATGTGTTTATTTTAC
AGCTTCCAATGGTGTTGTGCAAAATTTCAACGACTTTTCAATGTTAGGGT
GTTCAGAATTCAGGAACGTCACCTTCATAACCTTTCATGAGGATTATTTT
GTTAATACTTTCCATGCTACTTTTAATCACCATTTCTTCTTGCAAGGATT
AAACGATTTGCTTGACAAAGAAGCATGTTTTATGGTGAACTACTTCGACG
GTTTTGACATCGTGAGATTGAGAAAGAACTATAATATCAATCAATTTCAA
TTTCGAACAAAATATCGTCAACATATTGACTACAATCGATATGAGAACGA
ACAGCGTAGAATCGCAGAACTAATAAAGCAGCTTTACGATGAGAAAATCT
TGGGAAATGACGAAAACATCAAACAAACTATTGTCTTTATGGTAGGTGTT
AACAGTTATGCTTATGAAATAGTCAAATATCTTGAGTTACTGCAGGAAGA
GAGACAATGGGCAGTTATTATTTTTAGGACTTACACTGACTATGAACCAA
TAAATTGGCTTCCATTAAATCGAAATATCGAAACACAGGAAAGACTTTAT
AATCGTCCTGAAATGCAGTACCCAGACATTAAGACACTATTCGATGTCAT
AAAAAATCCGGACTTTGATGTTTATGATATGACGTACCGTTGGGTCATGT
CTAAGACAAATTTTTTCACTGATGATTGCATGAAGAAGATTCGAAAGATA
TTCGTCACTGTTGATTCTATGAAATTTACATATGTTCCAATGGCATCGGC
CATTTTGAGAAAAGTAAATGACCATCGTTCTAAAGTAAACCAAGAACCAT
TAGAAATTCATTTTTCTTCTTACTGGGAAGGCTTGAAACAATTATCAGAC
GGGCATTTGAGTAAAACTGAGTTTAAATGGCAAAACCATCCCCTTAACAA
GGAAAAGAACAAAAGATATGTTCACATCCTTATTTTAACCGGGCAAGAAT
CGTTGACATGTCCACAATTTATTGAAAAGCAAGACTTATACTACCGGCAA
TTTTTAGCAAAGAGGATAGAGAAATGTTTCGGTGATGTCAACGCTAAAAC
TTTTGAGACTGGCGAGGAGCTGTTCGAACATATAAATGATGATTTGTGCA
AAAAATGA Coding sequence (CDS) from alignment at sc0000049_pilon:820496..821653- >XLOC_038954 ID=XLOC_038954|Name=XLOC_038954|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000049_pilon:820496..821653- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCATGTAACACTGATATTCATGATATCAACATGTGTTTATTTTAC
AGCTTCCAATGGTGTTGTGCAAAATTTCAACGACTTTTCAATGTTAGGGT
GTTCAGAATTCAGGAACGTCACCTTCATAACCTTTCATGAGGATTATTTT
GTTAATACTTTCCATGCTACTTTTAATCACCATTTCTTCTTGCAAGGATT
AAACGATTTGCTTGACAAAGAAGCATGTTTTATGGTGAACTACTTCGACG
GTTTTGACATCGTGAGATTGAGAAAGAACTATAATATCAATCAATTTCAA
TTTCGAACAAAATATCGTCAACATATTGACTACAATCGATATGAGAACGA
ACAGCGTAGAATCGCAGAACTAATAAAGCAGCTTTACGATGAGAAAATCT
TGGGAAATGACGAAAACATCAAACAAACTATTGTCTTTATGGTAGGTGTT
AACAGTTATGCTTATGAAATAGTCAAATATCTTGAGTTACTGCAGGAAGA
GAGACAATGGGCAGTTATTATTTTTAGGACTTACACTGACTATGAACCAA
TAAATTGGCTTCCATTAAATCGAAATATCGAAACACAGGAAAGACTTTAT
AATCGTCCTGAAATGCAGTACCCAGACATTAAGACACTATTCGATGTCAT
AAAAAATCCGGACTTTGATGTTTATGATATGACGTACCGTTGGGTCATGT
CTAAGACAAATTTTTTCACTGATGATTGCATGAAGAAGATTCGAAAGATA
TTCGTCACTGTTGATTCTATGAAATTTACATATGTTCCAATGGCATCGGC
CATTTTGAGAAAAGTAAATGACCATCGTTCTAAAGTAAACCAAGAACCAT
TAGAAATTCATTTTTCTTCTTACTGGGAAGGCTTGAAACAATTATCAGAC
GGGCATTTGAGTAAAACTGAGTTTAAATGGCAAAACCATCCCCTTAACAA
GGAAAAGAACAAAAGATATGTTCACATCCTTATTTTAACCGGGCAAGAAT
CGTTGACATGTCCACAATTTATTGAAAAGCAAGACTTATACTACCGGCAA
TTTTTAGCAAAGAGGATAGAGAAATGTTTCGGTGATGTCAACGCTAAAAC
TTTTGAGACTGGCGAGGAGCTGTTCGAACATATAAATGATGATTTGTGCA
AAAAATGAATGTTTCATGTAACACTGATATTCATGATATCAACATGTGTT
TATTTTACAGCTTCCAATGGTGTTGTGCAAAATTTCAACGACTTTTCAAT
GTTAGGGTGTTCAGAATTCAGGAACGTCACCTTCATAACCTTTCATGAGG
ATTATTTTGTTAATACTTTCCATGCTACTTTTAATCACCATTTCTTCTTG
CAAGGATTAAACGATTTGCTTGACAAAGAAGCATGTTTTATGGTGAACTA
CTTCGACGGTTTTGACATCGTGAGATTGAGAAAGAACTATAATATCAATC
AATTTCAATTTCGAACAAAATATCGTCAACATATTGACTACAATCGATAT
GAGAACGAACAGCGTAGAATCGCAGAACTAATAAAGCAGCTTTACGATGA
GAAAATCTTGGGAAATGACGAAAACATCAAACAAACTATTGTCTTTATGG
TAGGTGTTAACAGTTATGCTTATGAAATAGTCAAATATCTTGAGTTACTG
CAGGAAGAGAGACAATGGGCAGTTATTATTTTTAGGACTTACACTGACTA
TGAACCAATAAATTGGCTTCCATTAAATCGAAATATCGAAACACAGGAAA
GACTTTATAATCGTCCTGAAATGCAGTACCCAGACATTAAGACACTATTC
GATGTCATAAAAAATCCGGACTTTGATGTTTATGATATGACGTACCGTTG
GGTCATGTCTAAGACAAATTTTTTCACTGATGATTGCATGAAGAAGATTC
GAAAGATATTCGTCACTGTTGATTCTATGAAATTTACATATGTTCCAATG
GCATCGGCCATTTTGAGAAAAGTAAATGACCATCGTTCTAAAGTAAACCA
AGAACCATTAGAAATTCATTTTTCTTCTTACTGGGAAGGCTTGAAACAAT
TATCAGACGGGCATTTGAGTAAAACTGAGTTTAAATGGCAAAACCATCCC
CTTAACAAGGAAAAGAACAAAAGATATGTTCACATCCTTATTTTAACCGG
GCAAGAATCGTTGACATGTCCACAATTTATTGAAAAGCAAGACTTATACT
ACCGGCAATTTTTAGCAAAGAGGATAGAGAAATGTTTCGGTGATGTCAAC
GCTAAAACTTTTGAGACTGGCGAGGAGCTGTTCGAACATATAAATGATGA
TTTGTGCAAAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:820496..821653 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 439-1143:706 |
| Aaloc | 313-435:829 |
| Aaloc | 145-312:1009 |
| Aaloc | 1-144:1159 |
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