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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:457587..459659+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043866 ID=XLOC_043866|Name=XLOC_043866|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2073bp|location=Sequence derived from alignment at sc0000111_pilon:457587..459659+ (Clytia hemisphaerica_ch_hm2_pilon)
cCAGAATTCAGTACGATCAAGATAGTATTTTTACGAACGTTCTGCGTTTT
ATACCTCTTGATATCCGCCATTTTATTGCACATGGTTGCCATGTTCCGCC
CATGGAAACAGGAATGGGTTGGGAAGCCAAGTAATTTGTTTGAGATTTCG
ATATGGAAGATATGCAGGAAGTcgagaaaatcaacaaaatgttaTGAAGG
TGAACTGGATGATGCCCCAGGTGAAAATAATCTTATTTTGGCATTTTCAA
TGATGTACTGTACTGATCACGAAGGAAATCATCTACAGTGGATTCCCTTT
AACACGATCCTTTATAACTCAAAATTACCTTTACTCCAAATAAATTGTGC
TCCAtatgtgtgttcgagttatggagactgtaTGTATTAAGTTAACAGCT
TCTGAATTGTCTAGATCCTAATCAGCTGAAGACGGCGGTATACGAGCACT
TTTAccatcctcgattttgcggtGCAGAATAATTGTTTTTCTGAATTACT
TCCAGTCACTCtgtcgtcctcaaaagtgcaaattaaACTCAAGCTAAACT
AATTAAAACTCGTTATTGTTAACAAATGTTAGCTCAGTCCTTTTACAAAT
ACAATAGGCTGACCAGAATGACTGGAcacaacccagctggcacacaacgt
tgttttaacaacgttcaaataacgttatatggacgttatgaacgtcacat
ggacgttgttttaacgttgtgTGACGTTTGGGAACGTTATCTGGACAAAG
ATGCACGTTAGCGTGTCATATGGAGGCGATTATCaaagtacaattttttt
aattttctttcattgtCTTATAGGTTGGTTTATGGCACTTCGATGGTTTA
TCATGTTAtcagtattcatgcagtacatCTCCTTGTTGTTCACATTGGCT
AAAATCACTTTCACCAAAAACTCAACTAGTCGACAGTTCTGGATACCCGC
TTTCTTATGCTTGTTCTCAGGTAAGCGTTTTCAATTATGAATCAAGTTTT
ATGAAaaccagtagcgtagacaaggggaCGCAAAATTTGTTTTGGAGAGC
AGATTtctatgacacagtaattactCTTTATATTACGAATagataattac
tgtttcataaAATTCTGCTcgcctacacaaattttgcgcctctCTTCTAC
GCTACGCTACTGAAAGCAGTAAAACCTTTTGAGCGTCTTGTTGAATAATA
GGTGAGTCTTTTGTATGCTGCATTTTCCAGCAGAGAAGGTCAGTTTTCAT
TTTGTCTTGATTTTGATTGACTGTGGACGTGTTTtaaccacagatttctg
taaaagataaaagtgaatatcgcaaaaaaaatgctgcttttgttttcgaa
aacacGGGAgacttcttattggtcaagtgctgatattctattgtaatgtt
acgtgacctaggtaggatttcctactaCTAATCGATCAGTCACTCTATTA
TTATCGAAAGGCTAGACacataaatgggggggggggtttgtacttttacg
gtgtgacgggattggcccttttttagtacggtattacgggatttgacgaa
aaaagagacgggaaaacggtattttaaaatcagacggtgacgggatttag
gtacatttttgccctgtacaagccggtgtgacggtgttgttattttttca
attttcgggattccgggattcatcaaaaattttgacgggaaaacggtatt
tcgaacccttacaaacccccccataaatCCACTCTCTCGGTCTTCAtcca
tttatactcttttgagtTATTTCACTGtagtatttttttctcttttcata
GCTATATTCATACTATGTGGAATGTTGATGTTAGTCGGTTACCGTGAGTT
TGACTTCTTAGAAGAATCCAGAATGTATCGCATGGGGTGGCGATTTGAAG
AAGTCCGAATTGACGAGGCATGGGGCTGGCCTTACTACCTAAGTTGGGGT
AATTTTGCAATTTGTTTGGTCGGCTTTTTAGTATGTATGTACACGCATGT
CACAGATACAAAATGGAGTAAAAGTTATGAAATGTTTAACATGAGAAATA
AAGCCAAGAAACTTTTGAGGTAA Coding sequence (CDS) from alignment at sc0000111_pilon:457587..459659+ >XLOC_043866 ID=XLOC_043866|Name=XLOC_043866|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1278bp|location=Sequence derived from alignment at sc0000111_pilon:457587..459659+ (Clytia hemisphaerica_ch_hm2_pilon)
cCAGAATTCAGTACGATCAAGATAGTATTTTTACGAACGTTCTGCGTTTT
ATACCTCTTGATATCCGCCATTTTATTGCACATGGTTGCCATGTTCCGCC
CATGGAAACAGGAATGGGTTGGGAAGCCAAGTAATTTGTTTGAGATTTCG
ATATGGAAGATATGCAGGAAGTcgagaaaatcaacaaaatgttaTGAAGG
TGAACTGGATGATGCCCCAGcCAGAATTCAGTACGATCAAGATAGTATTT
TTACGAACGTTCTGCGTTTTATACCTCTTGATATCCGCCATTTTATTGCA
CATGGTTGCCATGTTCCGCCCATGGAAACAGGAATGGGTTGGGAAGCCAA
GTAATTTGTTTGAGATTTCGATATGGAAGATATGCAGGAAGTcgagaaaa
tcaacaaaatgttaTGAAGGTGAACTGGATGATGCCCCAGGTTGGTTTAT
GGCACTTCGATGGTTTATCATGTTAtcagtattcatgcagtacatCTCCT
TGTTGTTCACATTGGCTAAAATCACTTTCACCAAAAACTCAACTAGTCGA
CAGTTCTGGATACCCGCTTTCTTATGCTTGTTCTCAGGTTGGTTTATGGC
ACTTCGATGGTTTATCATGTTAtcagtattcatgcagtacatCTCCTTGT
TGTTCACATTGGCTAAAATCACTTTCACCAAAAACTCAACTAGTCGACAG
TTCTGGATACCCGCTTTCTTATGCTTGTTCTCAGCTATATTCATACTATG
TGGAATGTTGATGTTAGTCGGTTACCGTGAGTTTGACTTCTTAGAAGAAT
CCAGAATGTATCGCATGGGGTGGCGATTTGAAGAAGTCCGAATTGACGAG
GCATGGGGCTGGCCTTACTACCTAAGTTGGGGTAATTTTGCAATTTGTTT
GGTCGGCTTTTTAGTATGTATGTACACGCATGTCACAGATACAAAATGGA
GTAAAAGTTATGAAATGTTTAACATGAGAAATAAAGCCAAGAAACTTTTG
AGGTAACTATATTCATACTATGTGGAATGTTGATGTTAGTCGGTTACCGT
GAGTTTGACTTCTTAGAAGAATCCAGAATGTATCGCATGGGGTGGCGATT
TGAAGAAGTCCGAATTGACGAGGCATGGGGCTGGCCTTACTACCTAAGTT
GGGGTAATTTTGCAATTTGTTTGGTCGGCTTTTTAGTATGTATGTACACG
CATGTCACAGATACAAAATGGAGTAAAAGTTATGAAATGTTTAACATGAG
AAATAAAGCCAAGAAACTTTTGAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:457587..459659 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 370-639:1804 |
| Aaloc | 223-366:826 |
| Aaloc | 1-219:1 |
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