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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000264_pilon:309211..315695- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014119 ID=XLOC_014119|Name=XLOC_014119|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6485bp|location=Sequence derived from alignment at sc0000264_pilon:309211..315695- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGATGATAAGTAACCGAACTAAATGTATCTCTTTTCAACACAGAAG
GAAAAATGGTTGCGCAGGGTAAAATGTTCCGAGTGTTTGCTTTTTATTCT
TTTCACATTGAATTTCAGTTTAGTAGTTAGTAGCTAGAAACTTTAAATGT
CTTATCACTTGAGTTGGTTAGTGTTTGATTTGTTCGAGGGTCACATTTAA
AATATTATGATCAAGAAGGACACGTTTTTTTATAAGATCATCCATTTTGA
GTTTTAAGCCTAATTATGTTCTTTAACCCTATTAGCCCCAAGCTTTTTTT
ATTTTTGTATCTACCACCCTCGATTATTTTTTATCTTGGAGAGCTACTCT
CGGGTGCCTAATAAACGTACATGTACGTTTATGAATTTCAACAAACATAT
TCCTCAATTTCAAGTCCCTTCTTGTGTTTCTTAAGGCTAAATATCCTTCT
TTGAATATGGAGGTTTTATCTATTTGTCAAATGAAAGCGGAATAACCATT
ATTTACCCCCTAACCGAACCTGAAAAGACCCTTCAATTAGGTTTTTACAC
CTCTATTTTCAACCCTGTATGTTTATTCGTTACTGTACGTTTATTAGGAA
CTCGAAAGTACAGTCATGAAATTTGGTACAGATGTTCATGAGACAAATTT
CCTGGAACAAAAAAAAATTTGATGACATTCGAAAACCGATGACGTCATCC
CAAAATTTCCACCTGTCGGCAAAAAGCCAAAATATATGGTTTACAAAAAT
GTCTATTACAATCGAACCAATAATGATATTTAGATTCTGTTTGAAGATTC
TGAAAGATAAAAGGCTGCCTTTTAACATAATTGCAGGTTTTGCAGTTTCC
ATAAAGATTTTATCTTAAATCTATGCTGAAGATGAGTAATTTTTTTTCAA
ATTTGATGACGTGACGTCATAAATGATGACATCATCATTTAAAAATTTTT
TTTTCTAGTTTTTCAAATTCATATTGTCAATACCTATCACGTGTCAAAAT
TTGAAGATGATTGAAGAAATAGTTCAGAAATTATCAGCACTTTAAAATTT
TGAGTTTTAAGCGATCTTAGCTGGATTTTATGTCATGTTTCACAATAAAG
TCATAAAACCTGATCTGGACAAGCTATAACCCTAAAATTTTGCACAAATA
CTCTTTAATAAGATTTTGTTAAAAGTCAGAAAGTTTCAAGTCGTTTAAAA
AGAATTTCACCGAGAAATACGCAAAAGAACACCAGCGTGGTAGATTCTAC
CCCCCCCCTGGGGCTAATAGGGTTAAATGATCTTATTTTCACCACTTTGT
TAAGAAATTAGGTATTTTGGAGTCCACGAATTTGGTTTGAATGAAAAATC
ATATTTTCTCGTTTCCAGGATGACGTTCAATCAGTTGGACACTGACGACG
AAATTACCGAGAATGACCGACTTTTAACGAAGAAAACTCGCAAACAACGA
CAATCACCTAAATCTCAACGAGATATCGAATCTCCTAACAAAGATGCCTC
AAAATGGGAACGGATTACATCAGCCATTAGAAAGAGGCTGAAAAAAGATG
GCCTTAGGATGGTCTTACTTATTATCTTGAATGGATTTTACCTCTACTTT
GGTGGAGTGGTATTCTATTTGCTGGAGACGAAACCAAAGTTTGTCGTGGA
TAAAAGGAAACACGTTGAAATGCTGTTCAACACTTTTAAGGTTAGGTTCA
TTACAAGTTCAATCTGACGTTGCGTCATGTGGGATACTCCAAATTGTCAC
AAAATACACGTTTTTTTTAGAATAAACTATATAAGAACATGAGGCTTCGA
TGGCCAAAATATTAGGAACAAGCTAAGAACATTTTAAGTCTTTTCAGACT
CTCTAACACCAGATTACTTAGGAAAATGGACAAAAAGACTCAGAAATGGT
GAAAATAAGAATATGTTAAGAACATTGTCAGGCTCAAAAATTTTGGGTGT
TCACATAAATAAAAAAACGTGTACCTCGTTATCACTTTCAAAAGAGTGGC
GCCCTCCCCTACCTTTGGGTAGATAGCTATCGAAAGAGGGGCCTCCGGGT
CGCCTCTGACTGCGGTTGGAGACTTAATTAGTATGATAGATTGATGGGGA
GCTCTACTTTACCATTCTTTTCCTTTTCGTAGAGTTTACATTTGACCGCT
GACCACATGATGATGAATATCAGCAATATTTCAACACATGACGTCAATAA
AATATCATCTGTTCTGCAAAATATTCATTCTGAATTTTCAGAAAGTGAAA
GTGAAAGCTGGACAGTCACGAATGCTGTCTTTTTTGCATCAACTGTTGTT
ACTACTATAGGTAAGTTTTCGTTGCATTTACTGTTTTTCATGTTTGGTGG
GGCGAGACCAGAAATAGGTTGCACGCATCCTCTCTGATATATCACAGTGA
ATGCGTGTAGCCTGGACCAAAAACAGAAAATTTTTAATTAGAAATGCTGT
ATTTTTTGTTTGGGAAAGCCAGACCATTTTTTTTTGTTTGGGAAAGCGAG
ACCAGCGATTTTAATTTCACTTTTGGTCTATCAAAATTTCAAAATTAATT
TTCTTCGAAAATTAAAACTTACTACAATCTGTTTCACACTTACGCGAATT
GGACATTCCATTTTATATCCATACAGGGGGTGGACGAACATTTCCAGAGG
GTTATCCGAGAAAGATTTCCAGGTGTGTTGTTTCAATTTCCAAGGGGGTA
AAAAGTTATTCTAAAATTTCCAGGGGGTAAAAGACTGATTTTAATTCGTC
CACCCTTATTTAAGATATGAGAAGAATTTTTCCAAGGGAAATTTTGCAAA
TTTTTGCCCTTTTCTAGGGGGTATCCACACATTTTCAATAATTTTCAGGT
TCGGTTTTAGGTTCGTCCACCCCCCTGTGTGGTTTTTTAATGGAACAGCC
CAATGTATCGTCCGAACTGACAAAGAAACATCATATAATTTTTCCTGTGA
AAATGTCAACAATGTCAAAGGAAAAATTATATGATCTTACATACTTTACT
TTTTCGACAATTTCCCTGCATCCACTCTTATGCTAAAGTAAAAAAATTAT
GCACCGTTGGAAAGATATCTTGGGGGAGAACGATCTAAAATATTTTAGAC
TTAGAGGAGGTTTAAATATTCTAAGAAGTGTCAGGGTTTAAGAGATTGAA
ATTGTTGAAAAATTTAGTGTCCACATACATTCGAGATGACTTTAATTCTT
TATTATTTAGAAGGATAAGCTTTTAAATTAGGTTGTCCATTGTATCTCTG
AAATTAAAAAAAATAGCTTCCTTCATTTTTTAGCAGATTCACTACTTAAC
AGAATTTTTTTTTCGTTACCTAGGTTACGGTAATATGGCGCCCGTGACAA
CAGGAGGGCGTTGGTTTTGTGTATTTTACGCCATCGTTGGCGTCCCGTTG
ACTGTCATGTTACTCGCACTTGTTGGAAAGATAATTTCGAAATACATCAA
TCACTTGTGTAACTTCATTGTCAAAACGCTGAGGGAATATCTTTATTCCA
AATATGAATATGAGCAGTAAGTTTTTCTTTTCCTATTTATAACTCCGAGG
AGGGATATCCAATAGGGTATATTCCGTAGGCGAGTGCGTTTTATTTTTGC
GCACGTGTTCTATGCGAAAATTAAGGTATGGTAACAGTGGTCTCTAATGT
TGCACTAAAGTTGTAATCTAACAGCCAATTCAATTGACTTCAAAATGTGC
CATTTTTGCCCTGATTGCCAATTATTTTGCATTCGATTGACAAAAATTTG
GCAAATGTGGCAAAATTTGAGTGCCATAAATGCCAAATAAAAAAGTTGTG
GTGAATCTGGCATTCTTGGCATTTTTGGAACTTACCTCCATACGTCTCCA
TGCAAAACACTGTTCCCACGAGACCTGTGTTCTTTTCGCTCCAATTTTGC
CACTTTTGCCAAAAAATAGAAGACCTTCCAATGCTAAAGCAAAACAGTGC
CGATCGGCAATTTGATTGGTTAAAAAATCGTTTGTTTCCAAACGCCGACA
GAAAACTGCTGACCAAGCATCACAAAACGGAAATCATAATGGCGGCGTGG
CGATGTACAAATTTGCCATAAAGCTGTGATCTTTTGACATTGAAATTGTA
GATTTGGCAAAGTTGGCGAGTATGGCAAATTTGGAAGTCGATCGAATTGG
CTGTAAATCTAAAGTTGCACTTTTGATTCCTGATCCGAACGCTGTTGTTG
GTTGGAGCTTCTCGTTATTAGAATGGCGTATCAGGCAAAATAGCTCTTTT
CATAAATTACGTCACGATCAGCGCTTACCTCTTTTTCAAAATATTGCTAT
GGTAATTGATTCGCAAAGGAGTTCATAAAACGTTACTCTATTTCTAGAAG
TAATAACTGGAGACTCAAGGGGTTAAATAACCTATGGTTTCCACTGACCT
TTATATATCCCTGGACCAAGAAATATCCGCCATCTTTGATTGGAGTTTTT
TTGGAATTGGTACCAGAGAGGAATTAACGTCTAACGCCGCTACATCGTTA
AAAGAATTTGAGAAAAAGTAGACCTAGCGCTCTTGATGCATTTACACCAC
TATCAAGTAGTGCCGCCATTAGGGTACCACTTTTCAAAAAACTCCGATCA
AAGATTTTGCTTAGCTGGAATTGGGAAGCTTGGTCCAGGGTATATAAAGG
TCAGTGATGGTTTCCAATTGGACTCAATAATATGGCTGTTTTTCGGCTTG
AAAATTGAATAATGCTGCATTCGAAGCTATTGAACTTTTCAATCCATTCT
TCTTATTCACCAGGGTTGACGAAGGAACAGAGCTTCGAGCACCAGTCTGG
TTGGCTCTTCTCTTCATGCTTTTGGTGACTTCGATATTCGCACTGATGTT
CATGAAGATGGAACAGTGGTCATTCTCCAAATCACTTTATTTCATCTTCA
TTACGTTTACCACGATTGGTTTTGGTGATATTGTACCACATAATGATAAT
GTAAGTTTTTTTCATTCCGATTTCCCCGATTTTTACCACCTACAACATAG
ATTTTTCGCTCAATTTTCTATTCTAAAACCATTTGCAAACGTGTTTTACT
GCCATTGCGATTTTGCCATGTCTTTGGCATAATTGCCATATAGAATGATT
TCACCGATTAAGCAGAGTTCGTTCGTACTGACAAACATTTCTAAGAGAGA
AACTTTATCAAAACTATTTTTGGCAACTATGGCTTGGACAAACACTCTCA
CTCTTTCATAGACCTTTATTAAGTAGACTATTGTTTCAGTTTTAAATATA
GTAAGAGGTAGAATAGCAAAGAGTCATATCACTATATTTCATTCAGAGTA
GAAATCAATTCAGGAACTCCCAAAGCTGCACTCTTAACTACACTGCTCAG
CACACTAATATTTCACCCAGAGTAGAAACTTATCCAGGAACTTTTCAAAG
TTGCACTTCTAAGTGCACTGCTTAGCGCGAGGCTCAGCGCACTAGTATTT
TAACCAGAGTAGAAATCAATTCAGGAACTTTTCAAAGCTGCACTCCTAGT
GTACTCTCTCAGAACACTAATATTTCATCCAGAGTAGAAATCAATTCAGG
AACTTTTCAAAGCTGCACTCCTAGTGTACTCTCTCAGAACACTAATATTT
CATCCAGAGTAGAAATCAATTCAGAAACTGTTCAAAGTTGCACTCCTAAG
TACTCTTCCAGCACAACTAATATTTCATCCATTAGTAGAAATCAATTCAG
GAACTGTTCAAAGTTGCACTTAAGTACACTGCTCAGCACTACTAATATTT
TGGCTGGAGTAGAAACTAATTCAAGCAGCATCAATGATTACAAACTACCA
ACACACCACAGTAAATGAAAAGTCTAGAAACTATAGCATTAATACAAACA
CCAGCAAACACTACTAAAAACATACACAAACTGAAATTCTTAATTCAGAA
AAAGAATTTAAGAAAGTACCGTATTTCTTCGAATAAACGCTACTGGCGTT
TATGAAATTTTTAGGATTTTAAAAGAGGCGTTTAATTCTGGGGGAGTTTA
AAAGAAGGGGTGTTTATTGAATAATTTTCAACCAAGGTCACTTTGATAAA
GTTAAGTGGAGATTCGAGCGGGAGGGGGGCGTTTAAAAGAAGGGGTGTTT
ATTCGAAGTAATACGGTACACTGTTTTTCTTTATCAGGCAATTTGGTTTA
ATGTCACTTTCCTTTACATTGGACTGGCTGCATTGTCCATTACCATAAAC
CTCTTGATTGCAAATATCACACATCAATATCGAAAACATAAACAAAAAAT
TAAGATTGTTCAGAAAATCGAAGAAGAACTAGAGGACTCGGACGAGGAAA
CTTTACCGGCAGACGAAAATGGTGACGTCACCGAAATGGCAGATTTTACT
AATGGTGGTAATGGTGGCGGTAAAGTGGCGGGTGATTCCCTGCGACGTTT
ATCGAATACACCCGTTGATAATAATTCGAATAACAACGAAAACAATAATG
ATAAAAATCTTCAAAACTTTGGGGATGGACTATAA Coding sequence (CDS) from alignment at sc0000264_pilon:309211..315695- >XLOC_014119 ID=XLOC_014119|Name=XLOC_014119|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000264_pilon:309211..315695- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGATGATAAGTAACCGAACTAAATGTATCTCTTTTCAACACAGAAG
GAAAAATGGTTGCGCAGGATGGCGATGATAAGTAACCGAACTAAATGTAT
CTCTTTTCAACACAGAAGGAAAAATGGTTGCGCAGGGATGACGTTCAATC
AGTTGGACACTGACGACGAAATTACCGAGAATGACCGACTTTTAACGAAG
AAAACTCGCAAACAACGACAATCACCTAAATCTCAACGAGATATCGAATC
TCCTAACAAAGATGCCTCAAAATGGGAACGGATTACATCAGCCATTAGAA
AGAGGCTGAAAAAAGATGGCCTTAGGATGGTCTTACTTATTATCTTGAAT
GGATTTTACCTCTACTTTGGTGGAGTGGTATTCTATTTGCTGGAGACGAA
ACCAAAGTTTGTCGTGGATAAAAGGAAACACGTTGAAATGCTGTTCAACA
CTTTTAAGGATGACGTTCAATCAGTTGGACACTGACGACGAAATTACCGA
GAATGACCGACTTTTAACGAAGAAAACTCGCAAACAACGACAATCACCTA
AATCTCAACGAGATATCGAATCTCCTAACAAAGATGCCTCAAAATGGGAA
CGGATTACATCAGCCATTAGAAAGAGGCTGAAAAAAGATGGCCTTAGGAT
GGTCTTACTTATTATCTTGAATGGATTTTACCTCTACTTTGGTGGAGTGG
TATTCTATTTGCTGGAGACGAAACCAAAGTTTGTCGTGGATAAAAGGAAA
CACGTTGAAATGCTGTTCAACACTTTTAAGAGTTTACATTTGACCGCTGA
CCACATGATGATGAATATCAGCAATATTTCAACACATGACGTCAATAAAA
TATCATCTGTTCTGCAAAATATTCATTCTGAATTTTCAGAAAGTGAAAGT
GAAAGCTGGACAGTCACGAATGCTGTCTTTTTTGCATCAACTGTTGTTAC
TACTATAGAGTTTACATTTGACCGCTGACCACATGATGATGAATATCAGC
AATATTTCAACACATGACGTCAATAAAATATCATCTGTTCTGCAAAATAT
TCATTCTGAATTTTCAGAAAGTGAAAGTGAAAGCTGGACAGTCACGAATG
CTGTCTTTTTTGCATCAACTGTTGTTACTACTATAGGTTACGGTAATATG
GCGCCCGTGACAACAGGAGGGCGTTGGTTTTGTGTATTTTACGCCATCGT
TGGCGTCCCGTTGACTGTCATGTTACTCGCACTTGTTGGAAAGATAATTT
CGAAATACATCAATCACTTGTGTAACTTCATTGTCAAAACGCTGAGGGAA
TATCTTTATTCCAAATATGAATATGAGCAGTTACGGTAATATGGCGCCCG
TGACAACAGGAGGGCGTTGGTTTTGTGTATTTTACGCCATCGTTGGCGTC
CCGTTGACTGTCATGTTACTCGCACTTGTTGGAAAGATAATTTCGAAATA
CATCAATCACTTGTGTAACTTCATTGTCAAAACGCTGAGGGAATATCTTT
ATTCCAAATATGAATATGAGCAGGTTGACGAAGGAACAGAGCTTCGAGCA
CCAGTCTGGTTGGCTCTTCTCTTCATGCTTTTGGTGACTTCGATATTCGC
ACTGATGTTCATGAAGATGGAACAGTGGTCATTCTCCAAATCACTTTATT
TCATCTTCATTACGTTTACCACGATTGGTTTTGGTGATATTGTACCACAT
AATGATAATGGTTGACGAAGGAACAGAGCTTCGAGCACCAGTCTGGTTGG
CTCTTCTCTTCATGCTTTTGGTGACTTCGATATTCGCACTGATGTTCATG
AAGATGGAACAGTGGTCATTCTCCAAATCACTTTATTTCATCTTCATTAC
GTTTACCACGATTGGTTTTGGTGATATTGTACCACATAATGATAATGCAA
TTTGGTTTAATGTCACTTTCCTTTACATTGGACTGGCTGCATTGTCCATT
ACCATAAACCTCTTGATTGCAAATATCACACATCAATATCGAAAACATAA
ACAAAAAATTAAGATTGTTCAGAAAATCGAAGAAGAACTAGAGGACTCGG
ACGAGGAAACTTTACCGGCAGACGAAAATGGTGACGTCACCGAAATGGCA
GATTTTACTAATGGTGGTAATGGTGGCGGTAAAGTGGCGGGTGATTCCCT
GCGACGTTTATCGAATACACCCGTTGATAATAATTCGAATAACAACGAAA
ACAATAATGATAAAAATCTTCAAAACTTTGGGGATGGACTATAAGCAATT
TGGTTTAATGTCACTTTCCTTTACATTGGACTGGCTGCATTGTCCATTAC
CATAAACCTCTTGATTGCAAATATCACACATCAATATCGAAAACATAAAC
AAAAAATTAAGATTGTTCAGAAAATCGAAGAAGAACTAGAGGACTCGGAC
GAGGAAACTTTACCGGCAGACGAAAATGGTGACGTCACCGAAATGGCAGA
TTTTACTAATGGTGGTAATGGTGGCGGTAAAGTGGCGGGTGATTCCCTGC
GACGTTTATCGAATACACCCGTTGATAATAATTCGAATAACAACGAAAAC
AATAATGATAAAAATCTTCAAAACTTTGGGGATGGACTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000264_pilon | genome | sc0000264_pilon:309211..315695 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 949-1296:349 |
| Aaloc | 763-948:1722 |
| Aaloc | 571-759:3161 |
| Aaloc | 391-567:4354 |
| Aaloc | 70-390:5117 |
| Aaloc | 1-66:6486 |
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