XLOC_018815 (mRNA) -

Overview
NameXLOC_018815
Unique NameXLOC_018815
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000058_pilon:1262869..1263825+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018815 ID=XLOC_018815|Name=XLOC_018815|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=957bp|location=Sequence derived from alignment at sc0000058_pilon:1262869..1263825+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCATCAAACTTGCGTATTACATTACGACGAGCGCAAGTAACACCAGC AAGACTTGCAACAATATTCAAGGTAATGATTaggcttttaaatgtttaaa taaTGTCTACGGTTGAAAGTTTGCTTTGTTTTCTTCCTTGTTAACTATCT GTTCACACAATTTTCGTATTTATCAGGCCGACCTCTGCCAACTATTAAAT CATacttttttagttcaaatattttttaccttGGACTCATTTCTGTTCAA GGATTTCTGTCAGAATTATTGaattgtaaataaaaatgaagcaagTTGGT TGAAGGCTAATTCCTTCCCCTTGTTCATTTTAGTTGAACGCAGTTGGATT GTTCATTACCGAGGATTGGGAGGATGCCCAATCGCCCCAGTCAGAATTCC CGGAGGACGGCAAGTTCCCGATCCTTGAAAATGCTCTATGTGGTGCAAAC TTCATAGTCAGAGGTGATCCCAGTGACTCAGCCAACCCAGGTCAAAACGC AGAAGGTACTGGCAGCCATACTCCAAACAAGGCTGAAGAAACACCAGGAC CGTCTTGTTTACTGGCTAGGTttaaaaaaacatcatcaacCACACTTCAA AAGTAAGATCATTTCTCGTGCCCTCTTACCGCAATAACCATTTTTCGAGG CTTTCACATTATTTTTCATAACACTAAGCTCCAGTAAAAAATGAATTAGA TTAGGCAGTACATAATGGGATATCCACATAATGTATCCGTGAAATATCTT TTTGTAGCTGAACTACTAGAACTTATGGACAGCTTTTTGTGTGCGTgggg ggggggCAGTATGGGGTCCAAGTTAAGATTAGATTTTAAATGAAAGTAGC TGATTATCCTTTACTATTTCATAGTTGATTTAACTGTTTATAATgagaaa acaaatttatttttcttcagcAAACTGTCCAGAAAACGACCAAATGCTTC AAACCTG

Coding sequence (CDS) from alignment at sc0000058_pilon:1262869..1263825+

>XLOC_018815 ID=XLOC_018815|Name=XLOC_018815|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000058_pilon:1262869..1263825+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCATCAAACTTGCGTATTACATTACGACGAGCGCAAGTAACACCAGC
AAGACTTGCAACAATATTCAAGAAAGCATCAAACTTGCGTATTACATTAC
GACGAGCGCAAGTAACACCAGCAAGACTTGCAACAATATTCAAGTTGAAC
GCAGTTGGATTGTTCATTACCGAGGATTGGGAGGATGCCCAATCGCCCCA
GTCAGAATTCCCGGAGGACGGCAAGTTCCCGATCCTTGAAAATGCTCTAT
GTGGTGCAAACTTCATAGTCAGAGGTGATCCCAGTGACTCAGCCAACCCA
GGTCAAAACGCAGAAGGTACTGGCAGCCATACTCCAAACAAGGCTGAAGA
AACACCAGGACCGTCTTGTTTACTGGCTAGGTttaaaaaaacatcatcaa
cCACACTTCAAAATTGAACGCAGTTGGATTGTTCATTACCGAGGATTGGG
AGGATGCCCAATCGCCCCAGTCAGAATTCCCGGAGGACGGCAAGTTCCCG
ATCCTTGAAAATGCTCTATGTGGTGCAAACTTCATAGTCAGAGGTGATCC
CAGTGACTCAGCCAACCCAGGTCAAAACGCAGAAGGTACTGGCAGCCATA
CTCCAAACAAGGCTGAAGAAACACCAGGACCGTCTTGTTTACTGGCTAGG
TttaaaaaaacatcatcaacCACACTTCAAAAcAAACTGTCCAGAAAACG
ACCAAATGCTTCAAACCTGcAAACTGTCCAGAAAACGACCAAATGCTTCA
AACCTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_018815XLOC_018815-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000058_pilongenomesc0000058_pilon:1262869..1263825 +
Properties
Property NameValue
Aaloc343-378:922
Aaloc73-339:334
Aaloc1-72:1