XLOC_035540 (mRNA) -

Overview
NameXLOC_035540
Unique NameXLOC_035540
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000002_pilon:2002560..2003101+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035540 ID=XLOC_035540|Name=XLOC_035540|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=542bp|location=Sequence derived from alignment at sc0000002_pilon:2002560..2003101+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTAGAAGAAGAAAAGATATGGCAGTTAAAAATTTGAACTTACCAGC GTTCCCGACGCTCGACTTGGGAGAAGTTGATACAATATCTTCAAGATGGA AGAAATATAAACAACGCTTTGAACTTTTGTGTACGGCGATAGGAGTTACA GAAGAAAAACAGAAACTTGCAATGTTTTTAACTTATGTAGGAGATGAAAC CTACGAAGTGTACGAGAATGTCAAGCCGAGTGACACAGGATTCAATACAA CTATTGAGGCTCTCGATAATCATTTCACACCGCAAACAAACACCAGCTAT GAGACATTTGTtttcagaaatttaaaacaaatgGACGGAGAAGGTTTGAA TGAATTCTACATAAGACTCCGTGAACAAGCCCCAAAATGTGGATTCGAAA ATACAGATTGAACATCAAACAACAAATCGAACTTTCAACAAACATAGAGA AGTTGAGATTATACAGTTTCCAACATCCAAATAAAACTTTACACGAATTA TTGACAATCGGTCGAACCTACGAAGCCACTACAAAACAAATA

Coding sequence (CDS) from alignment at sc0000002_pilon:2002560..2003101+

>XLOC_035540 ID=XLOC_035540|Name=XLOC_035540|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1084bp|location=Sequence derived from alignment at sc0000002_pilon:2002560..2003101+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTAGAAGAAGAAAAGATATGGCAGTTAAAAATTTGAACTTACCAGC
GTTCCCGACGCTCGACTTGGGAGAAGTTGATACAATATCTTCAAGATGGA
AGAAATATAAACAACGCTTTGAACTTTTGTGTACGGCGATAGGAGTTACA
GAAGAAAAACAGAAACTTGCAATGTTTTTAACTTATGTAGGAGATGAAAC
CTACGAAGTGTACGAGAATGTCAAGCCGAGTGACACAGGATTCAATACAA
CTATTGAGGCTCTCGATAATCATTTCACACCGCAAACAAACACCAGCTAT
GAGACATTTGTtttcagaaatttaaaacaaatgGACGGAGAAGGTTTGAA
TGAATTCTACATAAGACTCCGTGAACAAGCCCCAAAATGTGGATTCGAAA
ATACAGATTGAACATCAAACAACAAATCGAACTTTCAACAAACATAGAGA
AGTTGAGATTATACAGTTTCCAACATCCAAATAAAACTTTACACGAATTA
TTGACAATCGGTCGAACCTACGAAGCCACTACAAAACAAATAATGCCTAG
AAGAAGAAAAGATATGGCAGTTAAAAATTTGAACTTACCAGCGTTCCCGA
CGCTCGACTTGGGAGAAGTTGATACAATATCTTCAAGATGGAAGAAATAT
AAACAACGCTTTGAACTTTTGTGTACGGCGATAGGAGTTACAGAAGAAAA
ACAGAAACTTGCAATGTTTTTAACTTATGTAGGAGATGAAACCTACGAAG
TGTACGAGAATGTCAAGCCGAGTGACACAGGATTCAATACAACTATTGAG
GCTCTCGATAATCATTTCACACCGCAAACAAACACCAGCTATGAGACATT
TGTtttcagaaatttaaaacaaatgGACGGAGAAGGTTTGAATGAATTCT
ACATAAGACTCCGTGAACAAGCCCCAAAATGTGGATTCGAAAATACAGAT
TGAACATCAAACAACAAATCGAACTTTCAACAAACATAGAGAAGTTGAGA
TTATACAGTTTCCAACATCCAAATAAAACTTTACACGAATTATTGACAAT
CGGTCGAACCTACGAAGCCACTACAAAACAAATA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035540XLOC_035540-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002_pilongenomesc0000002_pilon:2002560..2003101 +
Properties
Property NameValue
Aaloc403-537:408
Aaloc1-402:1