TCONS_00014933 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014933
Unique NameTCONS_00014933
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1081

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014933 ID=TCONS_00014933|Name=TCONS_00014933|organism=Clytia hemisphaerica|type=transcript|length=1081bp
CCNCAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAAATTACA
AAGCCCTGCTCATCAAAAAACAGTACTGACAATGCATGGACGAGAATTAT
TCGAAGTTGTGGAGGCTcccttgaaaaatatattgatGTGTTATTTAGAA
AGCTCAAACTCAACGAAACCCACAACTTCCAACCAGCACACGTGGCTCAT
CATTGACTTcatggaaagatattttatttGGATACTTCTGCTTCTCATGG
TTGTAACGAATCTGGTCAGATGGCAAACCACTCATCTCACTCGCTCGCAT
TTGCTAGAAATATTTCTCTTACAACCAtgtTACATGCTGTTACCATTGCT
TCCAACAATTTACCCCCTTCTTTGGACTTTCACTGGTTTTTATGGAAGTG
CAAGACTACTCACATTGTTCAAGTCCTCGACAAAGCTTCCAGATACAAGT
AATGACTCAGAAGATGTCAGACTACAACATTTACATTGTGGTGAAGTACT
TGGTGTGTTTCGAGATATTGCAATGAACGCTTCGCCACACAACGTTCCCA
GAACTATCAACCTTGTTCAGAGTGTTGGCTCCATCACTACTTTTTCATGT
ATTGACAAAGAAGGCGTATTATGTTACCCGCAACCCACACCGGAGaagtt
gtttttcttcaaagaacATTCAAAGGTAAAGCGATCAGAAGAGATGGACG
ATCTTGTTCATGTCGATTCCTTGTTGTGCGATGAAGAAGACAAAACTGAA
ATCCAACCCTTCAAACAGGCTCCTGAACTGCGAGaTAACGCTGGTGAAAG
TGAACACCACTGTGTTCTTCTCAATGACATCGAAATCATGTCTCTGTCAC
ATAACTCAAGTTGTCCGTCGGGTATTCAATTTGATGACGTTGATTGGAAG
GAGCAAATGTCTTTTCTCCGAACCATAGTAAGTACTTCCAATTATGAGAG
AATTCATTTATTTAAACATCACAATCTAAATTAGATCGATTATAACTTTT
CAACAAGTCATACCGTCatatgatttttattttgatgcaaTTGTTGTCTA
AAAATTCAGTACGTCATCAAAGAAGTCATTA
Run BLAST on NCBI

protein sequence of TCONS_00014933-protein

>TCONS_00014933-protein ID=TCONS_00014933-protein|Name=TCONS_00014933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
XQPVLLESGDVFMPKLQSPAHQKTVLTMHGRELFEVVEAPLKNILMCYLE
SSNSTKPTTSNQHTWLIIDFMERYFIWILLLLMVVTNLVRWQTTHLTRSH
LLEIFLLQPCYMLLPLLPTIYPLLWTFTGFYGSARLLTLFKSSTKLPDTS
NDSEDVRLQHLHCGEVLGVFRDIAMNASPHNVPRTINLVQSVGSITTFSC
IDKEGVLCYPQPTPEKLFFFKEHSKVKRSEEMDDLVHVDSLLCDEEDKTE
IQPFKQAPELRDNAGESEHHCVLLNDIEIMSLSHNSSCPSGIQFDDVDWK
EQMSFLRTIVSTSNYERIHLFKHHNLN
Run BLAST on NCBI

transcript from alignment at sc0000201:181193..186591+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014933 ID=TCONS_00014933|Name=TCONS_00014933|organism=Clytia hemisphaerica|type=transcript|length=5399bp|location=Sequence derived from alignment at sc0000201:181193..186591+ (Clytia hemisphaerica)
CCNCAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAAATTACA
AAGCCCTGCTCATCAAAAAACAGTACTGACAATGCATGGACGAGAATTAT
TCGAAGTTGTGGAGGCTcccttgaaaaatatattgatgTAAGTTTTTAAT
GTTATTGAAACCAATTAAGATGACTGCAACAGTCATACTACCGAACCAAG
AAAACTAAATACCAAAAGATATTAATTTCATCTGTTTCAGGTGTTATTTA
GAAAGCTCAAACTCAACGAAACCCACAACTTCCAACCAGCACACGTGGCT
CATCATTGACTTcatggaaagatattttatttGGATACTACTGGTAAATA
Naccctgacaccccctgtataatacaatatactatcaagcaaactgccaa
atataccccaacaccccccttacatagtacaatatactatccataaaact
accaaatatacccctacaccccttcataaaataaaagttttaagCCAAAA
GACTTGNcatggaaagatattttatttGGATACTTCTGGTAAATGATTCT
CTACTTCTTTTATTAGATATTGTCTGGCTTTGTCTACTCTTTGAAATAAT
TGAAAGTTATCCAAAGTTCTAATCTGCGTAATAAACATGGAAGTTTACTT
GTCCTTTATCACCGGCAATTGTCAATTTCTTTCAATGATCTCCCAGTATA
AAAACTTGGAAAACCTGAGGATAATAAGAATTGTGCTCAAATGTAGCTCC
ATGGTGATAAGAAACTACTTTGAATTTAACTTGATATTGATTACTGGGGG
AGGGAGTTTTGTTTGCCATTGGTCAAGCAAATCTATAAGCACAGCAATGT
AATTTAACATGAAACTTAAATATACATTTGCAGCTTCTCATGGTTGTAAC
GAATCTGGTCAGATGGCAAACCACTCATCTCACTCGCTCGCATTTGCTAG
AAATATTTCTCTTACAACCAGTATGtatttgatctttctttttcttcgaa
tttatcttaaaatttccaagCTAAAAATCCCAAATAAAAGAACTTGGTCA
TTCATGACATTAAACTCTCAGAGTCCACGCTTGGCTAACCAGGGGGCATG
GCCCTCACTGTCGTCGACGCAAACCAAGCTTGCGCCTCACCTAGTTATAC
CAGATCATAGTTGGGTcgtatttttatttcatttttatgcaATATATTAT
TtcctttctatttattttagtgtTACATGCTGTTACCATTGCTTCCAACA
ATTTACCCCCTTCTTTGGACTTTCACTGGTTTTTATGGAAGTGCAAGACT
ACTCACATTGTTCAAGTCCTCGACAAAGGTTTTTTTGTTAATAGATCTTT
ACTTACAATGAATTGGTATTTATTGTATGTTCGATTCgtcaagaaattat
ttttgatcaatttaaaaataaaatcgatGATAACTCTTTGACTTTTGGGA
GACAAACGCCTTTGATAGTGATTTTGTATTAATTTGGTTTATTATTATCT
TTGCAGCTTCCAGATACAAGTAATGACTCAGAAGATGTCAGAGTAAGCTT
TTCACGATCcatctttttattttcacaaTGAGATATCTCTTACTCTTTCC
TTGATTGATGAACTAAACAATGATGACAACAGCCTCTTACATCAAACTGA
TGTGACAGATTTATTGATCATTACTACCAATAAactcattttttttgcat
tctattTACATCCAGCTACAACATTTACATTGTGGTGAAGTACTTGGTGT
GTTTCGAGATATTGCAATGAACGCTTCGCCACACAACGTTCCCAGAACTA
TCAACCTTGTTCAGAGTGTTGGCTCCATCACTGTATGTCTCACAAATTGA
AATTTACTTTTGATGACGTTCTAATTTTCATCTGAATTGCAGGGATTTTC
CCTTATTTGCAGGAAAATCAGTTTTATCCTTTTAATTCTAATGTCTCAGG
ATATCTAGAAATTAAGAAATTTaagcaaaacatttttaaagctCATTGCA
TCGCATAACTCATATCTAAAAATATCTTGACCACTATTGGATGTCGAAGT
CTGTGCTATGATTCAAAGCAAATTAAGGGCCATTTCaagtcgatttttga
attttaagagaATAATTTGTATAAAACTTTAGAATAATGTCTTTGACTAA
TCTAGACTAATTCCATAAAGATGGTAAAAAACGACATTataaacgtcaaa
aaaatgtcaatctcccctttttgaaaaaagtactACATCCTAGTAATGGG
CAATTAATTTGGGATAAGAAACAGACAAAAttctgttttaaaattttgcg
aTGAAATAATatccaaaaacattattttctgtttgaatttccgtattact
tcgaataaacgccccctttttttaaacgccccctcaaataaaagcttcct
tcttttaaacgcctccCCTCTAGATTGGGTGTTTGTTTGAAGCAAGTAGC
CTTGAGGGAGTATTATATGGAGGATTGTGTTGAAAATCTGATAATCCTCA
TTTCAAAAGTATTCATTTTCtttgtatcatttttttttcatcgcgATTGA
CCTATAAGTTATTTGACACATTTGATTCAATTTCCCTAACAAAAATTTAC
AGCAAGTTGTAAATATATGTTAATTAAAATTAGGGTCCTACCAAATAAGG
TTAGAGGTTTAggaaaagaatcaaaaagctaACCGATGGACGGCGGGGGC
agagaaattgcccaaaaaagggatgttccaccagtgtaATTTTAGGAGAT
TAAGGAGAGGCAAAATCATCTTTTAGAGAAGGTCTAACGATTCTTGAGGC
TTTATTTTATTTCCTGTCCCTGTTGATTATGCTAGACGACCATTCAGTCA
TATGTTTCATGTTGACTGACCTTTCATGCTGAATATCTCTTTTCAATTGT
AGACTTTTTCATGTATTGACAAAGAAGGCGTATTATGTTACCCGCAACCC
ACACCGGAGaagttgtttttcttcaaagaacATTCAAAGGTAAAGCGATC
AGAAGAGATGGACGATCTTGTTCATGTCGATTCCTTGTTGTGCGATGAAG
AAGACAAAACTGAAATCCAACCCTTCAAACAGGCTCCTGAACTGCGAGGT
ATGAACAGCTCTATATGTTTCCTACAGTCGATTAAATCTAAGGAAGTGTG
CTTCCtctagcaattaaagttgagcGCGAGTATTTATTGACCCTTAGATT
ATCAACGGCCATAATTTAACGGTGCTTAACAAGCTGCAATTTCTGCCGTT
GATTTTATTCTACTTTTGACTCTACGGGAATTAACATCGGTCGGAGTTTT
AAAGGTCGGGAAATGTCGACAGACACTTGAGAACGAGATGTTGAAAATTC
CAGCTAGccattatttacataaatcTATCAAAGCTTTGCTTTATTGGAAG
TAGCAGTACTCTTGGTTTGAACTGACGAATCGGTGTTGGTTGTAGTTGGT
GGTTCTTCTTAGTTGAGTTTTCCTTTTGAGCTTTCAAAATTGGATCTTAT
TTACGTTGTATTTATTTCTTAACTTTTAAGTGGAGCTTCTCCACTattct
tcttttcttcagaTAACGCTGGTGAAAGTGAACACCACTGTGTTCTTCTC
AATGACATCGAAATCATGTCTCTGTCACATAACTCAAGTGTGAGTACATT
CTAATCATAATGCTCATTCCATCACGACACGTTTTATACAATGAAGATTT
AGACTGAAAATTTACAAACACGTAGTCGGCCTGAGAATTGGCAGTTTTGA
cgaaatttgcttaaaatatCTATATAAATTCTCAGTTACTCTGTAGTCAA
TGTAAATACTTTTCATCACACCGAAATTGTATTGAAGATTTACTCGATCG
GGGAGCCAATTTTTATGATACACAAGAGAGTTATATTTTATATTCTCTTT
TTCTAGAGTCCATTTTGAAAAAGCCTATAAGATTTTAATCTGAACTTTCA
TAGACTGGGCCAAAATTAAGAtgcttaagagccattttctgtaagaaTCA
GGCAGGTCGAGGAAGTGATATCCtcagattttgccaatttttggatattt
tgctcaaatacatgaaaataacatcctgtaaaaatttttttgaaaaatcc
tctTTCGTTCCCAAGATATGGGCCtttaaaatttgggccaatttgcccag
aaaagtgcacttttgataaatctttgacttcaagagcaattttagacatg
atcaagcttaagattcatttcaaaacatattttcctggaagaaatccatg
ggtactttgaaaaaatggcattttgagaaaaaatttttgacccCACGGCT
AGAAATCATTGCCTGAAATCAcaacatttctaattttgaatagattttga
GAGCAATTAGCTGGCTTGGCCACAAGTGTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattgatatttttgtat
atttctgaagtctttatggtcatctttaactttcaattaaaattttcatg
tgaCACTTAAGGCCACGCCCTAAAATGGCGGTTGAACATAGCTTTTCGct
caatttttagtattttcaatgagcttttaaagccaTGGCCCTAAGTTTCA
CCtctgaaacaaaccatttttagTTAGTGTTTTGGCCATATTACCCAATC
CTAAAATCAAACCCATGTGCTCCAATACCATTTTTGCACAATTTATcttc
gaaaatctttttaagtcaTCAATTTTTCCCTTAGCAACGCATTGTTTTTC
CCTAGCAACCAGGCATCCAGCTTGATCAAAATTTTAGGGCAAATTAGGGT
CGCAGAGACAGAAATAGCAGACCCCAACAGGTAAGTACCCATGGATTTCT
TCcaggaaaatatgttttgaaatgaatcttaagcttgatcatgtctaaaa
ttgctcttaaagtcaaagatttatcaaaagtgcacttttttgggcaaatt
ggcccaaattttaaaGGCGGCCATATCTTGGGAACGAAAAAagattcttc
aaaaaaaaattcacaggatgttattttaatgtatttgagcaaaatatcca
aaactgattttttacagaaaatggctcttaaattTTTCCTCACTTTTCCA
ATTTCATTTTATAACGCCATCTTTTGTAGTGTCCGTCGGGTATTCAATTT
GATGACGTTGATTGGAAGGAGCAAATGTCTTTTCTCCGAACCATAGTAAG
TACTTCCAATTATGAGAGAATTCATTTATTTAAACATCACAATCTAAATT
AGATCGATTATAACTTTTCAACAAGTCATACCGTCatatgatttttattt
tgatgcaaTTGTTGTCTAAAAATTCAGTACGTCATCAAAGAAGTCATTA

Coding sequence (CDS) from alignment at sc0000201:181193..186591+

>TCONS_00014933 ID=TCONS_00014933|Name=TCONS_00014933|organism=Clytia hemisphaerica|type=CDS|length=9840bp|location=Sequence derived from alignment at sc0000201:181193..186591+ (Clytia hemisphaerica)
CCNCAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAAATTACA
AAGCCCTGCTCATCAAAAAACAGTACTGACAATGCATGGACGAGAATTAT
TCGAAGTTGTGGAGGCTcccttgaaaaatatattgatGTGTTATTTAGAA
AGCTCAAACTCAACGAAACCCACAACTTCCAACCAGCACACGTGGCTCAT
CATTGACTTcatggaaagatattttatttGGATACTTCTGCTTCTCATGG
TTGTAACGAATCTGGTCAGATGGCAAACCACTCATCTCACTCGCTCGCAT
TTGCTAGAAATATTTCTCTTACAACCAtgtTACATGCTGTTACCATTGCT
TCCAACAATTTACCCCCTTCTTTGGACTTTCACTGGTTTTTATGGAAGTG
CAAGACTACTCACATTGTTCAAGTCCTCGACAAAGCTTCCAGATACAAGT
AATGACTCAGAAGATGTCAGACTACAACATTTACATTGTGGTGAAGTACT
TGGTGTGTTTCGAGATATTGCAATGAACGCTTCGCCACACAACGTTCCCA
GAACTATCAACCTTGTTCAGAGTGTTGGCTCCATCACTACTTTTTCATGT
ATTGACAAAGAAGGCGTATTATGTTACCCGCAACCCACACCGGAGaagtt
gtttttcttcaaagaacATTCAAAGGTAAAGCGATCAGAAGAGATGGACG
ATCTTGTTCATGTCGATTCCTTGTTGTGCGATGAAGAAGACAAAACTGAA
ATCCAACCCTTCAAACAGGCTCCTGAACTGCGAGaTAACGCTGGTGAAAG
TGAACACCACTGTGTTCTTCTCAATGACATCGAAATCATGTCTCTGTCAC
ATAACTCAAGTTGTCCGTCGGGTATTCAATTTGATGACGTTGATTGGAAG
GAGCAAATGTCTTTTCTCCGAACCATAGTAAGTACTTCCAATTATGAGAG
AATTCATTTATTTAAACATCACAATCTAAATTAGCCNCAGCCAGTGTTAT
TAGAATCTGGAGATGTTTTTATGCCCAAATTACAAAGCCCTGCTCATCAA
AAAACAGTACTGACAATGCATGGACGAGAATTATTCGAAGTTGTGGAGGC
TcccttgaaaaatatattgatGTGTTATTTAGAAAGCTCAAACTCAACGA
AACCCACAACTTCCAACCAGCACACGTGGCTCATCATTGACTTcatggaa
agatattttatttGGATACTTCTGCTTCTCATGGTTGTAACGAATCTGGT
CAGATGGCAAACCACTCATCTCACTCGCTCGCATTTGCTAGAAATATTTC
TCTTACAACCAtgtTACATGCTGTTACCATTGCTTCCAACAATTTACCCC
CTTCTTTGGACTTTCACTGGTTTTTATGGAAGTGCAAGACTACTCACATT
GTTCAAGTCCTCGACAAAGCTTCCAGATACAAGTAATGACTCAGAAGATG
TCAGACTACAACATTTACATTGTGGTGAAGTACTTGGTGTGTTTCGAGAT
ATTGCAATGAACGCTTCGCCACACAACGTTCCCAGAACTATCAACCTTGT
TCAGAGTGTTGGCTCCATCACTACTTTTTCATGTATTGACAAAGAAGGCG
TATTATGTTACCCGCAACCCACACCGGAGaagttgtttttcttcaaagaa
cATTCAAAGGTAAAGCGATCAGAAGAGATGGACGATCTTGTTCATGTCGA
TTCCTTGTTGTGCGATGAAGAAGACAAAACTGAAATCCAACCCTTCAAAC
AGGCTCCTGAACTGCGAGaTAACGCTGGTGAAAGTGAACACCACTGTGTT
CTTCTCAATGACATCGAAATCATGTCTCTGTCACATAACTCAAGTTGTCC
GTCGGGTATTCAATTTGATGACGTTGATTGGAAGGAGCAAATGTCTTTTC
TCCGAACCATAGTAAGTACTTCCAATTATGAGAGAATTCATTTATTTAAA
CATCACAATCTAAATTAGCCNCAGCCAGTGTTATTAGAATCTGGAGATGT
TTTTATGCCCAAATTACAAAGCCCTGCTCATCAAAAAACAGTACTGACAA
TGCATGGACGAGAATTATTCGAAGTTGTGGAGGCTcccttgaaaaatata
ttgatGTGTTATTTAGAAAGCTCAAACTCAACGAAACCCACAACTTCCAA
CCAGCACACGTGGCTCATCATTGACTTcatggaaagatattttatttGGA
TACTTCTGCTTCTCATGGTTGTAACGAATCTGGTCAGATGGCAAACCACT
CATCTCACTCGCTCGCATTTGCTAGAAATATTTCTCTTACAACCAtgtTA
CATGCTGTTACCATTGCTTCCAACAATTTACCCCCTTCTTTGGACTTTCA
CTGGTTTTTATGGAAGTGCAAGACTACTCACATTGTTCAAGTCCTCGACA
AAGCTTCCAGATACAAGTAATGACTCAGAAGATGTCAGACTACAACATTT
ACATTGTGGTGAAGTACTTGGTGTGTTTCGAGATATTGCAATGAACGCTT
CGCCACACAACGTTCCCAGAACTATCAACCTTGTTCAGAGTGTTGGCTCC
ATCACTACTTTTTCATGTATTGACAAAGAAGGCGTATTATGTTACCCGCA
ACCCACACCGGAGaagttgtttttcttcaaagaacATTCAAAGGTAAAGC
GATCAGAAGAGATGGACGATCTTGTTCATGTCGATTCCTTGTTGTGCGAT
GAAGAAGACAAAACTGAAATCCAACCCTTCAAACAGGCTCCTGAACTGCG
AGaTAACGCTGGTGAAAGTGAACACCACTGTGTTCTTCTCAATGACATCG
AAATCATGTCTCTGTCACATAACTCAAGTTGTCCGTCGGGTATTCAATTT
GATGACGTTGATTGGAAGGAGCAAATGTCTTTTCTCCGAACCATAGTAAG
TACTTCCAATTATGAGAGAATTCATTTATTTAAACATCACAATCTAAATT
AGCCNCAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAAATTA
CAAAGCCCTGCTCATCAAAAAACAGTACTGACAATGCATGGACGAGAATT
ATTCGAAGTTGTGGAGGCTcccttgaaaaatatattgatGTGTTATTTAG
AAAGCTCAAACTCAACGAAACCCACAACTTCCAACCAGCACACGTGGCTC
ATCATTGACTTcatggaaagatattttatttGGATACTTCTGCTTCTCAT
GGTTGTAACGAATCTGGTCAGATGGCAAACCACTCATCTCACTCGCTCGC
ATTTGCTAGAAATATTTCTCTTACAACCAtgtTACATGCTGTTACCATTG
CTTCCAACAATTTACCCCCTTCTTTGGACTTTCACTGGTTTTTATGGAAG
TGCAAGACTACTCACATTGTTCAAGTCCTCGACAAAGCTTCCAGATACAA
GTAATGACTCAGAAGATGTCAGACTACAACATTTACATTGTGGTGAAGTA
CTTGGTGTGTTTCGAGATATTGCAATGAACGCTTCGCCACACAACGTTCC
CAGAACTATCAACCTTGTTCAGAGTGTTGGCTCCATCACTACTTTTTCAT
GTATTGACAAAGAAGGCGTATTATGTTACCCGCAACCCACACCGGAGaag
ttgtttttcttcaaagaacATTCAAAGGTAAAGCGATCAGAAGAGATGGA
CGATCTTGTTCATGTCGATTCCTTGTTGTGCGATGAAGAAGACAAAACTG
AAATCCAACCCTTCAAACAGGCTCCTGAACTGCGAGaTAACGCTGGTGAA
AGTGAACACCACTGTGTTCTTCTCAATGACATCGAAATCATGTCTCTGTC
ACATAACTCAAGTTGTCCGTCGGGTATTCAATTTGATGACGTTGATTGGA
AGGAGCAAATGTCTTTTCTCCGAACCATAGTAAGTACTTCCAATTATGAG
AGAATTCATTTATTTAAACATCACAATCTAAATTAGCCNCAGCCAGTGTT
ATTAGAATCTGGAGATGTTTTTATGCCCAAATTACAAAGCCCTGCTCATC
AAAAAACAGTACTGACAATGCATGGACGAGAATTATTCGAAGTTGTGGAG
GCTcccttgaaaaatatattgatGTGTTATTTAGAAAGCTCAAACTCAAC
GAAACCCACAACTTCCAACCAGCACACGTGGCTCATCATTGACTTcatgg
aaagatattttatttGGATACTTCTGCTTCTCATGGTTGTAACGAATCTG
GTCAGATGGCAAACCACTCATCTCACTCGCTCGCATTTGCTAGAAATATT
TCTCTTACAACCAtgtTACATGCTGTTACCATTGCTTCCAACAATTTACC
CCCTTCTTTGGACTTTCACTGGTTTTTATGGAAGTGCAAGACTACTCACA
TTGTTCAAGTCCTCGACAAAGCTTCCAGATACAAGTAATGACTCAGAAGA
TGTCAGACTACAACATTTACATTGTGGTGAAGTACTTGGTGTGTTTCGAG
ATATTGCAATGAACGCTTCGCCACACAACGTTCCCAGAACTATCAACCTT
GTTCAGAGTGTTGGCTCCATCACTACTTTTTCATGTATTGACAAAGAAGG
CGTATTATGTTACCCGCAACCCACACCGGAGaagttgtttttcttcaaag
aacATTCAAAGGTAAAGCGATCAGAAGAGATGGACGATCTTGTTCATGTC
GATTCCTTGTTGTGCGATGAAGAAGACAAAACTGAAATCCAACCCTTCAA
ACAGGCTCCTGAACTGCGAGaTAACGCTGGTGAAAGTGAACACCACTGTG
TTCTTCTCAATGACATCGAAATCATGTCTCTGTCACATAACTCAAGTTGT
CCGTCGGGTATTCAATTTGATGACGTTGATTGGAAGGAGCAAATGTCTTT
TCTCCGAACCATAGTAAGTACTTCCAATTATGAGAGAATTCATTTATTTA
AACATCACAATCTAAATTAGCCNCAGCCAGTGTTATTAGAATCTGGAGAT
GTTTTTATGCCCAAATTACAAAGCCCTGCTCATCAAAAAACAGTACTGAC
AATGCATGGACGAGAATTATTCGAAGTTGTGGAGGCTcccttgaaaaata
tattgatGTGTTATTTAGAAAGCTCAAACTCAACGAAACCCACAACTTCC
AACCAGCACACGTGGCTCATCATTGACTTcatggaaagatattttatttG
GATACTTCTGCTTCTCATGGTTGTAACGAATCTGGTCAGATGGCAAACCA
CTCATCTCACTCGCTCGCATTTGCTAGAAATATTTCTCTTACAACCAtgt
TACATGCTGTTACCATTGCTTCCAACAATTTACCCCCTTCTTTGGACTTT
CACTGGTTTTTATGGAAGTGCAAGACTACTCACATTGTTCAAGTCCTCGA
CAAAGCTTCCAGATACAAGTAATGACTCAGAAGATGTCAGACTACAACAT
TTACATTGTGGTGAAGTACTTGGTGTGTTTCGAGATATTGCAATGAACGC
TTCGCCACACAACGTTCCCAGAACTATCAACCTTGTTCAGAGTGTTGGCT
CCATCACTACTTTTTCATGTATTGACAAAGAAGGCGTATTATGTTACCCG
CAACCCACACCGGAGaagttgtttttcttcaaagaacATTCAAAGGTAAA
GCGATCAGAAGAGATGGACGATCTTGTTCATGTCGATTCCTTGTTGTGCG
ATGAAGAAGACAAAACTGAAATCCAACCCTTCAAACAGGCTCCTGAACTG
CGAGaTAACGCTGGTGAAAGTGAACACCACTGTGTTCTTCTCAATGACAT
CGAAATCATGTCTCTGTCACATAACTCAAGTTGTCCGTCGGGTATTCAAT
TTGATGACGTTGATTGGAAGGAGCAAATGTCTTTTCTCCGAACCATAGTA
AGTACTTCCAATTATGAGAGAATTCATTTATTTAAACATCACAATCTAAA
TTAGCCNCAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAAAT
TACAAAGCCCTGCTCATCAAAAAACAGTACTGACAATGCATGGACGAGAA
TTATTCGAAGTTGTGGAGGCTcccttgaaaaatatattgatGTGTTATTT
AGAAAGCTCAAACTCAACGAAACCCACAACTTCCAACCAGCACACGTGGC
TCATCATTGACTTcatggaaagatattttatttGGATACTTCTGCTTCTC
ATGGTTGTAACGAATCTGGTCAGATGGCAAACCACTCATCTCACTCGCTC
GCATTTGCTAGAAATATTTCTCTTACAACCAtgtTACATGCTGTTACCAT
TGCTTCCAACAATTTACCCCCTTCTTTGGACTTTCACTGGTTTTTATGGA
AGTGCAAGACTACTCACATTGTTCAAGTCCTCGACAAAGCTTCCAGATAC
AAGTAATGACTCAGAAGATGTCAGACTACAACATTTACATTGTGGTGAAG
TACTTGGTGTGTTTCGAGATATTGCAATGAACGCTTCGCCACACAACGTT
CCCAGAACTATCAACCTTGTTCAGAGTGTTGGCTCCATCACTACTTTTTC
ATGTATTGACAAAGAAGGCGTATTATGTTACCCGCAACCCACACCGGAGa
agttgtttttcttcaaagaacATTCAAAGGTAAAGCGATCAGAAGAGATG
GACGATCTTGTTCATGTCGATTCCTTGTTGTGCGATGAAGAAGACAAAAC
TGAAATCCAACCCTTCAAACAGGCTCCTGAACTGCGAGaTAACGCTGGTG
AAAGTGAACACCACTGTGTTCTTCTCAATGACATCGAAATCATGTCTCTG
TCACATAACTCAAGTTGTCCGTCGGGTATTCAATTTGATGACGTTGATTG
GAAGGAGCAAATGTCTTTTCTCCGAACCATAGTAAGTACTTCCAATTATG
AGAGAATTCATTTATTTAAACATCACAATCTAAATTAGCCNCAGCCAGTG
TTATTAGAATCTGGAGATGTTTTTATGCCCAAATTACAAAGCCCTGCTCA
TCAAAAAACAGTACTGACAATGCATGGACGAGAATTATTCGAAGTTGTGG
AGGCTcccttgaaaaatatattgatGTGTTATTTAGAAAGCTCAAACTCA
ACGAAACCCACAACTTCCAACCAGCACACGTGGCTCATCATTGACTTcat
ggaaagatattttatttGGATACTTCTGCTTCTCATGGTTGTAACGAATC
TGGTCAGATGGCAAACCACTCATCTCACTCGCTCGCATTTGCTAGAAATA
TTTCTCTTACAACCAtgtTACATGCTGTTACCATTGCTTCCAACAATTTA
CCCCCTTCTTTGGACTTTCACTGGTTTTTATGGAAGTGCAAGACTACTCA
CATTGTTCAAGTCCTCGACAAAGCTTCCAGATACAAGTAATGACTCAGAA
GATGTCAGACTACAACATTTACATTGTGGTGAAGTACTTGGTGTGTTTCG
AGATATTGCAATGAACGCTTCGCCACACAACGTTCCCAGAACTATCAACC
TTGTTCAGAGTGTTGGCTCCATCACTACTTTTTCATGTATTGACAAAGAA
GGCGTATTATGTTACCCGCAACCCACACCGGAGaagttgtttttcttcaa
agaacATTCAAAGGTAAAGCGATCAGAAGAGATGGACGATCTTGTTCATG
TCGATTCCTTGTTGTGCGATGAAGAAGACAAAACTGAAATCCAACCCTTC
AAACAGGCTCCTGAACTGCGAGaTAACGCTGGTGAAAGTGAACACCACTG
TGTTCTTCTCAATGACATCGAAATCATGTCTCTGTCACATAACTCAAGTT
GTCCGTCGGGTATTCAATTTGATGACGTTGATTGGAAGGAGCAAATGTCT
TTTCTCCGAACCATAGTAAGTACTTCCAATTATGAGAGAATTCATTTATT
TAAACATCACAATCTAAATTAGCCNCAGCCAGTGTTATTAGAATCTGGAG
ATGTTTTTATGCCCAAATTACAAAGCCCTGCTCATCAAAAAACAGTACTG
ACAATGCATGGACGAGAATTATTCGAAGTTGTGGAGGCTcccttgaaaaa
tatattgatGTGTTATTTAGAAAGCTCAAACTCAACGAAACCCACAACTT
CCAACCAGCACACGTGGCTCATCATTGACTTcatggaaagatattttatt
tGGATACTTCTGCTTCTCATGGTTGTAACGAATCTGGTCAGATGGCAAAC
CACTCATCTCACTCGCTCGCATTTGCTAGAAATATTTCTCTTACAACCAt
gtTACATGCTGTTACCATTGCTTCCAACAATTTACCCCCTTCTTTGGACT
TTCACTGGTTTTTATGGAAGTGCAAGACTACTCACATTGTTCAAGTCCTC
GACAAAGCTTCCAGATACAAGTAATGACTCAGAAGATGTCAGACTACAAC
ATTTACATTGTGGTGAAGTACTTGGTGTGTTTCGAGATATTGCAATGAAC
GCTTCGCCACACAACGTTCCCAGAACTATCAACCTTGTTCAGAGTGTTGG
CTCCATCACTACTTTTTCATGTATTGACAAAGAAGGCGTATTATGTTACC
CGCAACCCACACCGGAGaagttgtttttcttcaaagaacATTCAAAGGTA
AAGCGATCAGAAGAGATGGACGATCTTGTTCATGTCGATTCCTTGTTGTG
CGATGAAGAAGACAAAACTGAAATCCAACCCTTCAAACAGGCTCCTGAAC
TGCGAGaTAACGCTGGTGAAAGTGAACACCACTGTGTTCTTCTCAATGAC
ATCGAAATCATGTCTCTGTCACATAACTCAAGTTGTCCGTCGGGTATTCA
ATTTGATGACGTTGATTGGAAGGAGCAAATGTCTTTTCTCCGAACCATAG
TAAGTACTTCCAATTATGAGAGAATTCATTTATTTAAACATCACAATCTA
AATTAGCCNCAGCCAGTGTTATTAGAATCTGGAGATGTTTTTATGCCCAA
ATTACAAAGCCCTGCTCATCAAAAAACAGTACTGACAATGCATGGACGAG
AATTATTCGAAGTTGTGGAGGCTcccttgaaaaatatattgatGTGTTAT
TTAGAAAGCTCAAACTCAACGAAACCCACAACTTCCAACCAGCACACGTG
GCTCATCATTGACTTcatggaaagatattttatttGGATACTTCTGCTTC
TCATGGTTGTAACGAATCTGGTCAGATGGCAAACCACTCATCTCACTCGC
TCGCATTTGCTAGAAATATTTCTCTTACAACCAtgtTACATGCTGTTACC
ATTGCTTCCAACAATTTACCCCCTTCTTTGGACTTTCACTGGTTTTTATG
GAAGTGCAAGACTACTCACATTGTTCAAGTCCTCGACAAAGCTTCCAGAT
ACAAGTAATGACTCAGAAGATGTCAGACTACAACATTTACATTGTGGTGA
AGTACTTGGTGTGTTTCGAGATATTGCAATGAACGCTTCGCCACACAACG
TTCCCAGAACTATCAACCTTGTTCAGAGTGTTGGCTCCATCACTACTTTT
TCATGTATTGACAAAGAAGGCGTATTATGTTACCCGCAACCCACACCGGA
GaagttgtttttcttcaaagaacATTCAAAGGTAAAGCGATCAGAAGAGA
TGGACGATCTTGTTCATGTCGATTCCTTGTTGTGCGATGAAGAAGACAAA
ACTGAAATCCAACCCTTCAAACAGGCTCCTGAACTGCGAGaTAACGCTGG
TGAAAGTGAACACCACTGTGTTCTTCTCAATGACATCGAAATCATGTCTC
TGTCACATAACTCAAGTTGTCCGTCGGGTATTCAATTTGATGACGTTGAT
TGGAAGGAGCAAATGTCTTTTCTCCGAACCATAGTAAGTACTTCCAATTA
TGAGAGAATTCATTTATTTAAACATCACAATCTAAATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008350XLOC_008350Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014933-proteinTCONS_00014933-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014933-exon-sc0000201-1491911889:181193..181329TCONS_00014933-exon-sc0000201-1491911889:181193..181329Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:181193..181329TCONS_00014933-exon-sc0000201-1510915933:181193..181329Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:181193..181329TCONS_00014933-exon-sc0000201-1575043694:181193..181329Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:181433..181505TCONS_00014933-exon-sc0000201-1491911889:181433..181505Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:181433..181505TCONS_00014933-exon-sc0000201-1510915933:181433..181505Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:181433..181505TCONS_00014933-exon-sc0000201-1575043694:181433..181505Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:181701..181730TCONS_00014933-exon-sc0000201-1491911889:181701..181730Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:181701..181730TCONS_00014933-exon-sc0000201-1510915933:181701..181730Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:181701..181730TCONS_00014933-exon-sc0000201-1575043694:181701..181730Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:182076..182162TCONS_00014933-exon-sc0000201-1491911889:182076..182162Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:182076..182162TCONS_00014933-exon-sc0000201-1510915933:182076..182162Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:182076..182162TCONS_00014933-exon-sc0000201-1575043694:182076..182162Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:182413..182520TCONS_00014933-exon-sc0000201-1491911889:182413..182520Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:182413..182520TCONS_00014933-exon-sc0000201-1510915933:182413..182520Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:182413..182520TCONS_00014933-exon-sc0000201-1575043694:182413..182520Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:182699..182734TCONS_00014933-exon-sc0000201-1491911889:182699..182734Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:182699..182734TCONS_00014933-exon-sc0000201-1510915933:182699..182734Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:182699..182734TCONS_00014933-exon-sc0000201-1575043694:182699..182734Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:182908..183024TCONS_00014933-exon-sc0000201-1491911889:182908..183024Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:182908..183024TCONS_00014933-exon-sc0000201-1510915933:182908..183024Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:182908..183024TCONS_00014933-exon-sc0000201-1575043694:182908..183024Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:184095..184290TCONS_00014933-exon-sc0000201-1491911889:184095..184290Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:184095..184290TCONS_00014933-exon-sc0000201-1510915933:184095..184290Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:184095..184290TCONS_00014933-exon-sc0000201-1575043694:184095..184290Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:184755..184831TCONS_00014933-exon-sc0000201-1491911889:184755..184831Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:184755..184831TCONS_00014933-exon-sc0000201-1510915933:184755..184831Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:184755..184831TCONS_00014933-exon-sc0000201-1575043694:184755..184831Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1491911889:186372..186591TCONS_00014933-exon-sc0000201-1491911889:186372..186591Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1510915933:186372..186591TCONS_00014933-exon-sc0000201-1510915933:186372..186591Clytia hemisphaericaexon
TCONS_00014933-exon-sc0000201-1575043694:186372..186591TCONS_00014933-exon-sc0000201-1575043694:186372..186591Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:181193..186591 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.88374	6.26159	10.903	11.4007	3.3526	2.88153	6.65967	5.13813	5.73135	7.65278	6.88243	6.84828	3.91893	4.08019	8.33983	9.59473	7.57452	10.3947	5.62244	5.43091	5.46785	4.83518	5.92445	6.6161	4.0589	4.95257	3.40306	2.50061	4.15451	4.50884
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014933 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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