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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000041_pilon:835039..838387+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040601 ID=XLOC_040601|Name=XLOC_040601|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3349bp|location=Sequence derived from alignment at sc0000041_pilon:835039..838387+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGGATGATTTGAAAGAAGATGATCCACTCTTAGACACAGATGAAGAAGA
TGAGGATTTTATTCCTGATGACGacgacgatgatgatgatgaagactACG
TTCCAGATGGTATGTTCCTCTAcacattctttttataagcaacaaAGTTG
CTAAGAGGCTCGAGCCCTGAAATTAGCCAAATTTTTTAGTATTGCAAATG
ATAGGCCATGACCCAATAAACATAATATCATAGTGTCCTAGTAGGTTGAT
TCCCctcccttgaaaatttcttttttgattttttgctcataACATAATAC
TGCTTCTATTCATGTTATCTCGTCCctatatacaaagaaaaatgtaaatt
gTCACCACCTCGAATATAAAACACTATAACATGTTTTTAGCTTGAAGTTG
AACAGatatgttttatgttttatgtttgACACCAGAGAACAGAAAAtctt
ttcctcagatttttttCTCCCCACCCTTGACTTTTTGGAGCTATCTTCCC
CCTCCTTTtgattgccccccccccctagaatttTGAATGAACCCTTTtcc
cattttctgaaaaaaaactcccccccccctttttaaaagGGGGGAGGACA
CtgaatatggtataatatcaggggtggtttttttCAGGACATTCCGATTC
GGACCCAGACTTTGGTTCAAAGAAACGAAAGCGCAAAACTTCTTCGTCTT
CATCACCAAAGAAACGAACTCGAAGTTCTTCCTCTGCCGCTGCCAAAAAG
TCACcaggaagaaaaagaaaaagttcttCCAAATCTCCAGCCAAGAAAAC
TCCTGCGAAGAAATCACCagccaaaaagaagaaaaccacAAGAGGTTCAG
CCAAAGCAGCTCCTTTGTCACCCTCGCTTAGAAGGTGAGAAAACTGCTTC
TCAAACAAGTGCAAATTGTATTTGCAAGATTTTAGGTCTGGTTCTTAGag
caaataattttattttaatctaAGAAAGCAAGTTTTCGATTACGTCTGag
ggcgacccaaaggctcccttttctctagctgtgtACCCttaggtagggga
gggtgccactcctTTCACTGGATCGCTCTTTATTTTAATACTAGATCGTG
GAAGTAGAAGAACAACCATAGAAAAAGAGTTATGACAATGtttttttCAA
CACAGTTTAGATTGTCTAATTTCATATGTCCCAGCCAGttgggaattttt
ttcattgttccTTTTTTATTGTACACTAGGAGTTCACGTAGCTCGCGCGG
ACGGATAGTTTCGTACGCGGACGCGGACATATCAGAGGAAGAACACTTGC
AAGATTTGGAGGCGTCTAGTGACTCTGAAGATGAAGTGAAACAGATAAAG
AAAGCGAAGAGAGAGTCTGCACGaaaaaaaCATGTGGATGACTTGTGGTC
GTCCTTCAAAACTGATACTGCTGACGCTGGTTCgaagaggaggacgcgag
gagcaaagaaggaagaggagaagaagcagacagagaaagaggaagaaaaa
gaggaagataacaaaacacagagtaaagacacaaagaaaagcgaagCGTC
AAAGCAGGAAACTTCTAAGGACGAACCCtcgaaaaaagaagaagaaattt
cagAGCCACCAAAAGATGAAGTTAAGGAGGGTGAAGCAAAGGAGGGCGAA
GCAAAGGAGGGCGAAGGAGAGTCGAAAGAAGCACTTTCTaaaacgaaaac
tgaaaatgaacagtcgaaaacagaagatgataaacagaaaaacggcgata
aaaaagaagaagtgagtaaggaggagagcaaggaaaagaaaaaggaagat
aaaggtgaaaacaaggaaacaacagaggagaaaactgactccaatcaaaa
aagcgaaaaaccaaaaagctccgaacaagtcagcgaaagcacaaaggaag
cgaaacaagaaagTGCCAGCGCAAAGGGCTCCAAACCGGAGGAGGCCAAG
ACTGAGGAAAGGAAGCCTTCTGAAACGCCTTCCACCACGACCGCCACCGC
CACTCCTTCAACAACGCCATCTGAAAACAAACCCATCTCCTCAACTTCTT
CTTCTACCGCCAACAGCATTGCCAATAACAATGAAATAGTGAGTCttgtt
ttgtaacttttttaccAGTGCCCTGCAAAGAGGAGGGTGAtgattttcat
tcttttttcttgCAGAAAATGAAGACCGAGCTAATGTCAACTATTTTAGC
AGCGAGTGGTTTTGAAGGTTTGCTAACTCATACAATTTCTTTTCGCACTT
TCAGAAACCAACTCTACCAAAAGGTGTAGCAGCTGCTTCAAATAGTCTCC
CGAAAGGTTTAGGGTGAGAGATAACTTCTAATTTATCAGTCTAGCATGCT
CGACTACTAATTCATACATGTAAAAGATAAGCAAAACATAATGGAAGGAA
CAAATTTTACTgtatacaaactgatattatatTATCCCATAACATATTTC
ATGTTATCATATAGCACCCATATTATacggattataaacgactcaaGTCT
ACTAACTTTTCATTgtgaataaaagttttgactGTCGCTGATCAATTGAT
TTTATGATTATATTGTATTTAATTCAATTTAATTCTGTCTTTTGTAGcta
ttcttttaaaattctttaaaggTACCTTTAAATTTTACCAAGGATTTTTA
CAAATACTCCTTTTCTCTTTTACAGTGCATTTCAGAAAGGTGGTGGCTTG
TCCTCCATCGTTGGAAGtatgaaagagaaaaagaagacaAGCATCTTGGT
TAGTTCGTGTTATTAATCATTTCGTAATTATTTCAATTTCCCAAACCATC
CAATAAGAAATATTTATAAACACCCACCTCTTCCAAATTGAGTTTATTTT
CCTTGGggtttaagattttttcagcaaaaattgtattttgcgaACAAACT
TTCTTGGTAGACGCCTTAAGATAAGTCTTTTACCTCCCTTCTCTTCCCTT
CTTGCAGGACCAATCAAAGAGCGATTGGAACAGTTTTAAGAATGATGAAG
GACTGGAAGATGAACTGAAAGCGAATCGAAATGCTGGGTAAGTTTCCTAT
CAACCATTTGTTCACTATTTTGACTAATCCGACCTTAAAAGCCACATCAA
GTTTTACGATATAAATTTCTAGCATCTGATATCTCTTAAAGACACGAAAC
TGAAAGTCCTTCGAATGACCAATGCATCACAAAAAAGGGGAAATCAGTAA
ATCATTGTCTTTATCTACCATTGACGCACTAAACAAATTgatctaatttt
ttttgaaggtaTTTGGACAAGCAAGAATTTCTTCAACGAGTTGATTACAA
ACAGTGGGAAAACGAACGTGAAATGAGGCTGTATACAAACCACAAATAA Coding sequence (CDS) from alignment at sc0000041_pilon:835039..838387+ >XLOC_040601 ID=XLOC_040601|Name=XLOC_040601|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2976bp|location=Sequence derived from alignment at sc0000041_pilon:835039..838387+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGGATGATTTGAAAGAAGATGATCCACTCTTAGACACAGATGAAGAAGA
TGAGGATTTTATTCCTGATGACGacgacgatgatgatgatgaagactACG
TTCCAGATGaTGGATGATTTGAAAGAAGATGATCCACTCTTAGACACAGA
TGAAGAAGATGAGGATTTTATTCCTGATGACGacgacgatgatgatgatg
aagactACGTTCCAGATGGACATTCCGATTCGGACCCAGACTTTGGTTCA
AAGAAACGAAAGCGCAAAACTTCTTCGTCTTCATCACCAAAGAAACGAAC
TCGAAGTTCTTCCTCTGCCGCTGCCAAAAAGTCACcaggaagaaaaagaa
aaagttcttCCAAATCTCCAGCCAAGAAAACTCCTGCGAAGAAATCACCa
gccaaaaagaagaaaaccacAAGAGGTTCAGCCAAAGCAGCTCCTTTGTC
ACCCTCGCTTAGAAGGACATTCCGATTCGGACCCAGACTTTGGTTCAAAG
AAACGAAAGCGCAAAACTTCTTCGTCTTCATCACCAAAGAAACGAACTCG
AAGTTCTTCCTCTGCCGCTGCCAAAAAGTCACcaggaagaaaaagaaaaa
gttcttCCAAATCTCCAGCCAAGAAAACTCCTGCGAAGAAATCACCagcc
aaaaagaagaaaaccacAAGAGGTTCAGCCAAAGCAGCTCCTTTGTCACC
CTCGCTTAGAAGGAGTTCACGTAGCTCGCGCGGACGGATAGTTTCGTACG
CGGACGCGGACATATCAGAGGAAGAACACTTGCAAGATTTGGAGGCGTCT
AGTGACTCTGAAGATGAAGTGAAACAGATAAAGAAAGCGAAGAGAGAGTC
TGCACGaaaaaaaCATGTGGATGACTTGTGGTCGTCCTTCAAAACTGATA
CTGCTGACGCTGGTTCgaagaggaggacgcgaggagcaaagaaggaagag
gagaagaagcagacagagaaagaggaagaaaaagaggaagataacaaaac
acagagtaaagacacaaagaaaagcgaagCGTCAAAGCAGGAAACTTCTA
AGGACGAACCCtcgaaaaaagaagaagaaatttcagAGCCACCAAAAGAT
GAAGGAGTTCACGTAGCTCGCGCGGACGGATAGTTTCGTACGCGGACGCG
GACATATCAGAGGAAGAACACTTGCAAGATTTGGAGGCGTCTAGTGACTC
TGAAGATGAAGTGAAACAGATAAAGAAAGCGAAGAGAGAGTCTGCACGaa
aaaaaCATGTGGATGACTTGTGGTCGTCCTTCAAAACTGATACTGCTGAC
GCTGGTTCgaagaggaggacgcgaggagcaaagaaggaagaggagaagaa
gcagacagagaaagaggaagaaaaagaggaagataacaaaacacagagta
aagacacaaagaaaagcgaagCGTCAAAGCAGGAAACTTCTAAGGACGAA
CCCtcgaaaaaagaagaagaaatttcagAGCCACCAAAAGATGAAGCAAA
GGAGGGCGAAGGAGAGTCGAAAGAAGCACTTTCTaaaacgaaaactgaaa
atgaacagtcgaaaacagaagatgataaacagaaaaacggcgataaaaaa
gaagaagtgagtaaggaggagagcaaggaaaagaaaaaggaagataaagg
tgaaaacaaggaaacaacagaggagaaaactgactccaatcaaaaaagcg
aaaaaccaaaaagctccgaacaagtcagcgaaagcacaaaggaagcgaaa
caagaaagTGCCAGCGCAAAGGGCTCCAAACCGGAGGAGGCCAAGACTGA
GGAAAGGAAGCCTTCTGAAACGCCTTCCACCACGACCGCCACCGCCACTC
CTTCAACAACGCCATCTGAAAACAAACCCATCTCCTCAACTTCTTCTTCT
ACCGCCAACAGCATTGCCAATAACAATGAAATACAAAGGAGGGCGAAGGA
GAGTCGAAAGAAGCACTTTCTaaaacgaaaactgaaaatgaacagtcgaa
aacagaagatgataaacagaaaaacggcgataaaaaagaagaagtgagta
aggaggagagcaaggaaaagaaaaaggaagataaaggtgaaaacaaggaa
acaacagaggagaaaactgactccaatcaaaaaagcgaaaaaccaaaaag
ctccgaacaagtcagcgaaagcacaaaggaagcgaaacaagaaagTGCCA
GCGCAAAGGGCTCCAAACCGGAGGAGGCCAAGACTGAGGAAAGGAAGCCT
TCTGAAACGCCTTCCACCACGACCGCCACCGCCACTCCTTCAACAACGCC
ATCTGAAAACAAACCCATCTCCTCAACTTCTTCTTCTACCGCCAACAGCA
TTGCCAATAACAATGAAATAAAACCAACTCTACCAAAAGGTGTAGCAGCT
GCTTCAAATAGTCTCCCGAAAGGTTTAGGAAACCAACTCTACCAAAAGGT
GTAGCAGCTGCTTCAAATAGTCTCCCGAAAGGTTTAGGTGCATTTCAGAA
AGGTGGTGGCTTGTCCTCCATCGTTGGAAGtatgaaagagaaaaagaaga
caAGCATCTTGTGCATTTCAGAAAGGTGGTGGCTTGTCCTCCATCGTTGG
AAGtatgaaagagaaaaagaagacaAGCATCTTGGACCAATCAAAGAGCG
ATTGGAACAGTTTTAAGAATGATGAAGGACTGGAAGATGAACTGAAAGCG
AATCGAAATGCTGGGACCAATCAAAGAGCGATTGGAACAGTTTTAAGAAT
GATGAAGGACTGGAAGATGAACTGAAAGCGAATCGAAATGCTGGgtaTTT
GGACAAGCAAGAATTTCTTCAACGAGTTGATTACAAACAGTGGGAAAACG
AACGTGAAATGAGGCTGTATACAAACCACAAATAAgtaTTTGGACAAGCA
AGAATTTCTTCAACGAGTTGATTACAAACAGTGGGAAAACGAACGTGAAA
TGAGGCTGTATACAAACCACAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041_pilon | genome | sc0000041_pilon:835039..838387 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1399-1488:3260 |
| Aaloc | 1318-1395:2958 |
| Aaloc | 1246-1317:2677 |
| Aaloc | 1186-1242:2255 |
| Aaloc | 751-1185:1654 |
| Aaloc | 358-747:1231 |
| Aaloc | 112-354:640 |
| Aaloc | 1-108:1 |
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