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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000166_pilon:206779..210161- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_043442 ID=XLOC_043442|Name=XLOC_043442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3383bp|location=Sequence derived from alignment at sc0000166_pilon:206779..210161- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAGTGAGAATACCCCTGAAGCGATGGCATTGATTGCTTTCATTGA
ATTCATGGTAGCAATCGTTGCTGATTGGTACACCATTGTTTTGACTGGTG
TGATTGTTCTCTTTTTCATCCCGGTTATCATACTCATCTTGTTTTATGCG
GTGGCTGTCTTTTTGTATGCCTACAAAAGGAGTAGAATGGAAGCTTACAA
GACAAAACGACATTTTGGAGAACGTTTTTGGAACAGTGCTCGGCTTTCTG
TGTGTACATTTTTATGTTTGCTGGCTAAATATTGGCATGGTAAGAGTTTT
TGCTTTTGTTTTAACTGAATGTTCTCAGTATACTGTTTTTAAGGCTAAAA
TATGAAATTTTAAATTTGATATCACTTCCGTTTAATTTTAATCTCTTCAA
TTCAAAATGACAAAAAATAATTTCTTTTAAATTAGTTAAATCAATTTTTA
ACCTTTGACCTTTTAATCTGACAATACAAATTTGCCTCTCTCAGTCCAAT
AATAATTAAGCCAATATTAAGAATTCTATGTTAATGTTTCCCATTCTAAT
TTCTTCTCCACAGCACATGAGGTTGTTGGCATGGAAAATATTCCAGATAG
GGGGCCAGCATTATTGTGTATGTACCATGGCACTCTTCCTGTAGATGTTT
ACTATTTGCTAGCTAAATTACAATTGTTCAAGAAGAGACGCTTGAAAATT
ATCGTCGACCACTTTTTGTTTAAAATGCCAGGTAATTAATAAATGTTTAA
ATGTTTAGGTTGGTTGATTTAACAAAGCAATGCAATACATTTTATAGGCC
GTCGTCAGTGTAGCCTTTAGGAATTTGTTTTTAGTTTTTTTCTGGATAGC
TGGACTTTGATACCATTGATCTTGCTTTTTTCTGCCTTTACATGTATTTC
TCAATTGACTTGACTTGTTTCAAGAATAAAAAAATATTTGTGGTATGCGG
TGTACACCTTTTAGGGATCACGTTTCTCATTTATCATATGCAATGGTGAT
ACGTACGAGAGAAATCTTTTTTGAAGAAGTATTTTATAAATGTGCTAAAA
TGACTTTTCATGGATTCTGTCACGTTTACAATTTAATTTGATCAATCTCG
TGATAAGCTAAACGTGAAATCAATCACACAGACGGGCTGTTTATTTCATA
AAAGGAATCATGTGTTTGTGATCATATATTATTGATTTTATTTACAGGCT
TGAAAAACCTGTTAGAAGTCTTCCGATGTTTTACAGGACCGGCAGCCGAA
TGCGTTCGAACTTTGAGGGTAAGTTTAAAAAAAGTTAAGCCATTGTTTGT
TAAGTCACATATTTTTGTGTGTTGAACTCATGTAACAAGACACCGACTAT
GTTGTTAGGATGACCTCTGAAATCCTTTTGGCTCTTTGAATTTCACTTAA
TGTTTGATAGTTAGAACACACATCACGAAATCTCTCGTTTTTCTTCTTGA
TGTCGTCTCAAAACAGGTCCTTATTAGACAAACTCCCAAAGTCGAGTAAA
ACATGGACTTTCAATTCCCTTTATAAAATATCACCTTTAACTTTGTTTTA
TAGAAAGGTCACTTATTAGCTATCTACCCTGGAGGTGTACGCGAAGCTTT
ATTCTCTGGTGACAATTATGAGTTGACGTGGAACAAACGAACTGGATTCG
CTAAAGTTGCGCTTGCCGCTCGATCTGTAAGTTGCCGATCTTTATTGATT
CTTTTTTTCTTTCGCTTGTTTATTTTTTGAAGTGTCACGGCATCAGGAAG
TTTTCCCTTCTTTTAACAACTATAATCCGAATAAATCAAAACAATTTTCG
TACGAATAAATACATTTTTAATAAGAACTGTACCAATACTTGGAATTGAT
TAGGTTGAAAGATATACCATAAAGATATATCATAAATTTTTTATTTCAGC
CCATCATTCCAATCTTTACAACGAACAGTCGCGATAGTTTCAAAGTTGTC
AGAACAGGGCAAGGTAAGTTATTATTGATAGTTCTTTCTAATTATAAAAT
TAATCTTTACTTCACGACACTTTATCAACCCTTGCACACCTTTTACAAAG
GATTTTTGTTCGAGTTTATCAGTGTTGAATGATGCCGAATATTTGTAACG
GGAGGTCTGTTAATCCAAAGGCTTCAGACTTTTGAGATCATAGTTACAAA
ATGATTGATAGGTATATGTACGCTAGGGTATCGTTTATCTGTACAAATTT
GGCTTAAGGAAGTAACATCCCTTACACCTTTCCTATTTCCGTATTTTTCT
TGGTACACTCGCATGTATATATTTATTACGTTTTTTTGTTTCGTTTACAG
GGTTTGCCAAGTGGTTATATGAAAAGACCAAATTCCCTTTCGTCTTATAT
TACGGTGGTTTTCCTGTTAAAATGAAGTAAGAATCTTTCGTTATGTTCGT
GTGTTGTTTACACGGTACAATGACGTAAGACCGGCACGAGAAAACAAATG
ATTTGCGCCCTTTCATTTTTTTTGCACTCATGGCGACAAGTTAATTTTGT
ACCTTTATTCTCTTTGTTGTGATTTCTTACAATTGCTTTTCAAAAACTAA
TATTTAAAGTATGATCCTCAAGTTTGCAAAGGAATGCCAGTTTTTGTCTC
CCTCTCTTTCAAAATATTTGAAGTGCTAAATATTTTTTCTTTGCAATAGG
ACTGTTATTGGACCCCCGATTGAGTACGATCCCAGTATGAAACCAGAAGA
AGTCTCTGCACTGGTAAGTTTGTTGTGTTTCTTAAATCAAAAAGTCACGA
AATTATATGTTCTCGCGTGTCAATAGCAAATATCCAGTGTTCACATTGAG
ATGGACAAGGCGTTCTTTTGAGTTCTCAACTTACAAATATTTACTTCTCA
AAAGCCCACCATCATCGATGATCACAAACATTGCATCATTGTGTAGATTT
TTATGAAGGAGGCATAAATAAAGAAAGTAGATTTTAAAAACTTTTAAAGG
GGTATACCATTTCACGTGATTGAGAAAAGGGTTTACGATTACATGTAATA
CAAAGAAAGGGACATATTTCTATTTGAAAAATTCATTTACAAAGAAGATC
GCTCATTTGTCACAGCCCTCTACCCTCTGTCTTAACCACTCAAACATTTT
GCCAATGGACAAAATTACTGAATAAAGGATTGAAAGAGGAACGCTCTCTT
CCAAATCTTAGATTCAAAAGATGCCAATCAATCTCCTCTTGAGACAGGGG
TGTCTTTTCAAAGAAAGGTGAAATGTTGATCATTCTTTTCTGTTGAATTT
ATAGTGTCAAGCAGCAGTCGAGAAATTGATTCAAGAACATCAAACGTTAC
CTGGCACTGTAGTTGGAGGTCTCAAAGATCGATGGATGCCTTCACTGAAC
AAGAAAAATAAAAAATCTGTAAAAACCGACTAA Coding sequence (CDS) from alignment at sc0000166_pilon:206779..210161- >XLOC_043442 ID=XLOC_043442|Name=XLOC_043442|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000166_pilon:206779..210161- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAGTGAGAATACCCCTGAAGCGATGGCATTGATTGCTTTCATTGA
ATTCATGGTAGCAATCGTTGCTGATTGGTACACCATTGTTTTGACTGGTG
TGATTGTTCTCTTTTTCATCCCGGTTATCATACTCATCTTGTTTTATGCG
GTGGCTGTCTTTTTGTATGCCTACAAAAGGAGTAGAATGGAAGCTTACAA
GACAAAACGACATTTTGGAGAACGTTTTTGGAACAGTGCTCGGCTTTCTG
TGTGTACATTTTTATGTTTGCTGGCTAAATATTGGCATGATGGGCAGTGA
GAATACCCCTGAAGCGATGGCATTGATTGCTTTCATTGAATTCATGGTAG
CAATCGTTGCTGATTGGTACACCATTGTTTTGACTGGTGTGATTGTTCTC
TTTTTCATCCCGGTTATCATACTCATCTTGTTTTATGCGGTGGCTGTCTT
TTTGTATGCCTACAAAAGGAGTAGAATGGAAGCTTACAAGACAAAACGAC
ATTTTGGAGAACGTTTTTGGAACAGTGCTCGGCTTTCTGTGTGTACATTT
TTATGTTTGCTGGCTAAATATTGGCATGCACATGAGGTTGTTGGCATGGA
AAATATTCCAGATAGGGGGCCAGCATTATTGTGTATGTACCATGGCACTC
TTCCTGTAGATGTTTACTATTTGCTAGCTAAATTACAATTGTTCAAGAAG
AGACGCTTGAAAATTATCGTCGACCACTTTTTGTTTAAAATGCCAGCACA
TGAGGTTGTTGGCATGGAAAATATTCCAGATAGGGGGCCAGCATTATTGT
GTATGTACCATGGCACTCTTCCTGTAGATGTTTACTATTTGCTAGCTAAA
TTACAATTGTTCAAGAAGAGACGCTTGAAAATTATCGTCGACCACTTTTT
GTTTAAAATGCCAGGCTTGAAAAACCTGTTAGAAGTCTTCCGATGTTTTA
CAGGACCGGCAGCCGAATGCGTTCGAACTTTGAGGGCTTGAAAAACCTGT
TAGAAGTCTTCCGATGTTTTACAGGACCGGCAGCCGAATGCGTTCGAACT
TTGAGGAAAGGTCACTTATTAGCTATCTACCCTGGAGGTGTACGCGAAGC
TTTATTCTCTGGTGACAATTATGAGTTGACGTGGAACAAACGAACTGGAT
TCGCTAAAGTTGCGCTTGCCGCTCGATCTAAAGGTCACTTATTAGCTATC
TACCCTGGAGGTGTACGCGAAGCTTTATTCTCTGGTGACAATTATGAGTT
GACGTGGAACAAACGAACTGGATTCGCTAAAGTTGCGCTTGCCGCTCGAT
CTCCCATCATTCCAATCTTTACAACGAACAGTCGCGATAGTTTCAAAGTT
GTCAGAACAGGGCAAGCCCATCATTCCAATCTTTACAACGAACAGTCGCG
ATAGTTTCAAAGTTGTCAGAACAGGGCAAGGGTTTGCCAAGTGGTTATAT
GAAAAGACCAAATTCCCTTTCGTCTTATATTACGGTGGTTTTCCTGTTAA
AATGAAGGTTTGCCAAGTGGTTATATGAAAAGACCAAATTCCCTTTCGTC
TTATATTACGGTGGTTTTCCTGTTAAAATGAAGACTGTTATTGGACCCCC
GATTGAGTACGATCCCAGTATGAAACCAGAAGAAGTCTCTGCACTGGACT
GTTATTGGACCCCCGATTGAGTACGATCCCAGTATGAAACCAGAAGAAGT
CTCTGCACTGTGTCAAGCAGCAGTCGAGAAATTGATTCAAGAACATCAAA
CGTTACCTGGCACTGTAGTTGGAGGTCTCAAAGATCGATGGATGCCTTCA
CTGAACAAGAAAAATAAAAAATCTGTAAAAACCGACTAATGTCAAGCAGC
AGTCGAGAAATTGATTCAAGAACATCAAACGTTACCTGGCACTGTAGTTG
GAGGTCTCAAAGATCGATGGATGCCTTCACTGAACAAGAAAAATAAAAAA
TCTGTAAAAACCGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000166_pilon | genome | sc0000166_pilon:206779..210161 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 856-984:130 |
| Aaloc | 793-855:734 |
| Aaloc | 718-789:1082 |
| Aaloc | 652-714:1485 |
| Aaloc | 529-651:1831 |
| Aaloc | 460-528:2185 |
| Aaloc | 292-456:2819 |
| Aaloc | 1-288:3384 |
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