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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000377_pilon:96508..100010- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_009533 ID=XLOC_009533|Name=XLOC_009533|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3503bp|location=Sequence derived from alignment at sc0000377_pilon:96508..100010- (Clytia hemisphaerica_ch_hm2_pilon)
GCTGCTGTTCAACAAAAGAAATTAAAAGAGAACACACAAACAACAGATGC
ACTTGCAACAACAAACACACGAAAAACTTTACTAAAGCCTGAAGATGTTA
CAACAATTATTGCAACCCCTGCTCTTGACGCACAAGAGTCCCTTAACGCC
GCCACTACGGCCAGTACCAGTGACCATAAAATATCCCCTTTACTATCACA
ATCAGAATTAAGTTTGACGGCCACGGCACCAGTGAGTACGGCCACGATCA
ATGATGGGCCGAAGCGACTCCATGTGACTAATTTACCGTTTAAAGTTCGT
GATACAGAATTGAGAAATATGTTTGCTGTAAGTTGTTTTTTCTACGCTAG
GAACTAAAAAACGCATTGCAGGAAGAAGCCAGTAGCCTGGATTCGTACGT
ATGTAGTATTAAGTATTATAATGAGTTAAAGTTAAAGTTGACTGGACTGA
TTTAATCCCGTATTTTAAAGAATAATACAGTTTAAACACAAGGAACTTGT
TATGGGATTTATAGAAAATTGCTCTCTCCTGTGTCCTATTCTTCTCTTTT
AAAATATACGGATCGGTCTTAGACGCAGAGATTATTTACAATGAACGTGG
AAGCAAAGGTTTTGGTTTTGTTACCATGGAAACAAGCGAGGATGCTTCAA
AAGCGAAAGAAGCTCTACACGGAAAAGAAATTGACGGGCGAAAAATTGAG
GTGAGAAAATGTTGTATTTTGTCCATTCTTTTAATGGAAATTTTTTCCTG
GACAGTTTTACGTCATCTTCTTTTTAAACATTTTTGACATAACTGGCGTT
TGAAAAGTGCCCTCAACTTTGCGCCTACTCTTACACTTAGAATAGGCAGG
GCGAAAAGTGAGCCGTCTAAACTAGAGCTAAGATGAGGGAGTGACCTTAA
GCGCTAGTTTAGATGGCCACCTTTCTACCCTACCTAATATGGTTTTTAGA
GTAGGCAGAAAGTGGGCACAAAGTTGATAGTTAAAATCTTTGCTTGGAAA
ATATAAAAAAAAGTCATTGCATTGGCGTCAAACGAGGGCAATGCATTGAC
TTTAGACAGCCCACTTTATGCCCACCTTAATTCACAATTAGAAAAGGCAG
GGCGAAAAGTGGTCCGTCTAAACTAGAGCTTAGAGATATTGGAAGATTCG
AAAATTCTGACGAAAGATTCCAGTAACTGTTATTAATCAGTATTTTCTTA
TCTTTTACTCAGGTCAACAAAGCAACTCCTAGGACTAACACTTCGAAAGG
TAATGTTTGCTCATGTAGGTTAAAATGTATCGAAAACGAACCGTCCATTA
TTTGTGCATTTAAACAATCTATAATATACTGTCTGTCGGCTTTAAAGAAG
AAGTCTGTAAAATACTTGACCGATGATTGCGACTAAAGACTACATTTCAT
TTAAAGTTACAATACACTTTTATTTTATGAGAATATAAAGCTTTGGTTAT
AGAATAAATTTACACCTATTCTTGCCACAAATTCCAGAAACTACTAAGAA
AATACTACGGTTTCGATTTCATTTCTGAAAATGAAACAAAACAAAGAACG
TCGAGGCCTTGATTTTATTAGTAAAATAAGTACAATAATCTTGTTCAGAA
TTTACAGGCTGGCACACAAAAAGCCTTTATTTCTCGTATTTCATTACATA
CTGATTTATATTTCTTTTGAACAGTAACCCCCCGATTGCGAAACAAGTCG
CCGATCGCTGCAACCACAGCCACCCCTGGTCTTCTCCAACCCACCGGTGC
TGGTCATCTAAACGGTGTCATTCGTCCGATTACCATGGCAACTCAGGCAG
CTGCCTACCCTGCAGCCTGGAATCCAGCGTAAGTAGTTTTTTTCTTGCTT
GACTACAAGTTTAAGTACTGTCATATTTTTTAAATCTAAAATAATAAGTT
TTGTAAATTAATAGGAATGAAGTTTTTAAATTTGGCTGAGTTGTTTTTTC
TGAGAAAAATAAATTTCAAACAGCCAAATGCGAAATTATGGGACAAAAGC
AATAGCTTGAAACCCCCTTGTCAAGAAATATTTCACTTGAAAACTATTTA
CACTTTAATCTTTTTTTTCTGTTTTTAGTTCGTTGACCGCCCTTTCTACA
CCCTCCATACCGACTACCTTTCAACTACCGCCCTCTCCTCACCAACTTCT
TTCATCCGCTATTTCAACCGGAACAATGCCGGGTACTGCAAATCCAATGT
TTTCGAGGTAAGAAATCCATTTTTGGTGTATACTCTCTTTCTGCTAAATC
AATGTGTCTGCATAACTTTGGGGCAAACACCCCTGTCTCAGTGTCCCGGT
GGAACATTTTCCCACATTTAGGATAAAAGTTTTTTTCCGAAATCTCACTG
TAGTAGAGGGCATTTTGTACCTAACTCGAGATATTGAGCTTCAAAAAGCG
CAAAATTTGGACAAAATAGCTGTTTCTGGCTAAAAAACACGGTTTTCAAG
GGTTAATATCTCGAGTTAGGTACAGAAATCACCTATACTTGCAATATATC
TCTAATCTTAATTTTTTGAGAGCTTTCCAAAAATATACAATAGGTCTCCG
TTTTCTCGAGCTAAAATTTTCATTAATTTTTAACCCTATGATTTTTGCCT
GAGACCGTCATATTTGTCCGAAAATCACACCAAAGTGTCCGAATAAAAAT
TGGAAACATCGTAATTTCGATTCCCCTACCCCTTAGCTTTCCAAAAATAT
ATAACAAGTGCTTCTAACAAAACAATCGAGCGATTCCAAAAAATCGAACA
AAATTCCCTCTACTACTGGGAATAGACAATTTTAAAGTACATTTTATTCC
ATTGAACTTCGAATAGGGATGAAATCCCACCAGATCTTTGACACGGTGGT
AAAGGCATGGTATATCTCAAGACAAAACGGTCTTTTTCCATCAGAATGCC
TTTGTTTTAAACGATTCCTTTTCAATAAAAACTCAAGTATCAAATTGATA
AGTCTTCCAAATGGGTGAAAGAAGACGATTTTTCATGGATTTATCAACAA
AAACATACCTAGACCTTGTGTAGTAAATCCCTATTGTTTGATTGAATTCT
TTTTGATTACTTTTCAGCTTCCCATCACCGTTTTACCCCACTCCCGTAAG
TATTAATAAACATTTTATTGCATTTTAGAAAATATGAATCTATTTATATT
CGAATTAAAATTTCGAAAAAATATACATATGATTGGTTTCGTAAGGAGCT
TTTACTTTATACTACTTGTAGATAGAGTGTCCATTTTATGCTTTTCCCTG
ATGCATAAATGGAATGTTAATTTCCCTATGTTTGCAAATTTTCTCGGAAA
TACATCGTGTATTCCCTAGTACCGATGGAAAAAAACAAACTTATTTCTAA
CCCTCCTTTTTCTTTTCACAGGAACAATACGCACAATATTACAACTATAT
CACAGGAGGTTCAAGTGTACCCGTCACACCCAACACAAATCAAACTGGTC
CGATCCGAGCTGCCCCTAATACTAATATGTTCCATCGATTTCAACCATAT
TGA Coding sequence (CDS) from alignment at sc0000377_pilon:96508..100010- >XLOC_009533 ID=XLOC_009533|Name=XLOC_009533|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1908bp|location=Sequence derived from alignment at sc0000377_pilon:96508..100010- (Clytia hemisphaerica_ch_hm2_pilon)
GCTGCTGTTCAACAAAAGAAATTAAAAGAGAACACACAAACAACAGATGC
ACTTGCAACAACAAACACACGAAAAACTTTACTAAAGCCTGAAGATGTTA
CAACAATTATTGCAACCCCTGCTCTTGACGCACAAGAGTCCCTTAACGCC
GCCACTACGGCCAGTACCAGTGACCATAAAATATCCCCTTTACTATCACA
ATCAGAATTAAGTTTGACGGCCACGGCACCAGTGAGTACGGCCACGATCA
ATGATGGGCCGAAGCGACTCCATGTGACTAATTTACCGTTTAAAGTTCGT
GATACAGAATTGAGAAATATGTTTGCTGCTGCTGTTCAACAAAAGAAATT
AAAAGAGAACACACAAACAACAGATGCACTTGCAACAACAAACACACGAA
AAACTTTACTAAAGCCTGAAGATGTTACAACAATTATTGCAACCCCTGCT
CTTGACGCACAAGAGTCCCTTAACGCCGCCACTACGGCCAGTACCAGTGA
CCATAAAATATCCCCTTTACTATCACAATCAGAATTAAGTTTGACGGCCA
CGGCACCAGTGAGTACGGCCACGATCAATGATGGGCCGAAGCGACTCCAT
GTGACTAATTTACCGTTTAAAGTTCGTGATACAGAATTGAGAAATATGTT
TGCTATATACGGATCGGTCTTAGACGCAGAGATTATTTACAATGAACGTG
GAAGCAAAGGTTTTGGTTTTGTTACCATGGAAACAAGCGAGGATGCTTCA
AAAGCGAAAGAAGCTCTACACGGAAAAGAAATTGACGGGCGAAAAATTGA
GATATACGGATCGGTCTTAGACGCAGAGATTATTTACAATGAACGTGGAA
GCAAAGGTTTTGGTTTTGTTACCATGGAAACAAGCGAGGATGCTTCAAAA
GCGAAAGAAGCTCTACACGGAAAAGAAATTGACGGGCGAAAAATTGAGGT
CAACAAAGCAACTCCTAGGACTAACACTTCGAAAGGTCAACAAAGCAACT
CCTAGGACTAACACTTCGAAAGTAACCCCCCGATTGCGAAACAAGTCGCC
GATCGCTGCAACCACAGCCACCCCTGGTCTTCTCCAACCCACCGGTGCTG
GTCATCTAAACGGTGTCATTCGTCCGATTACCATGGCAACTCAGGCAGCT
GCCTACCCTGCAGCCTGGAATCCAGCTAACCCCCCGATTGCGAAACAAGT
CGCCGATCGCTGCAACCACAGCCACCCCTGGTCTTCTCCAACCCACCGGT
GCTGGTCATCTAAACGGTGTCATTCGTCCGATTACCATGGCAACTCAGGC
AGCTGCCTACCCTGCAGCCTGGAATCCAGCTTCGTTGACCGCCCTTTCTA
CACCCTCCATACCGACTACCTTTCAACTACCGCCCTCTCCTCACCAACTT
CTTTCATCCGCTATTTCAACCGGAACAATGCCGGGTACTGCAAATCCAAT
GTTTTCGAGTTCGTTGACCGCCCTTTCTACACCCTCCATACCGACTACCT
TTCAACTACCGCCCTCTCCTCACCAACTTCTTTCATCCGCTATTTCAACC
GGAACAATGCCGGGTACTGCAAATCCAATGTTTTCGAGCTTCCCATCACC
GTTTTACCCCACTCCCCTTCCCATCACCGTTTTACCCCACTCCCGAACAA
TACGCACAATATTACAACTATATCACAGGAGGTTCAAGTGTACCCGTCAC
ACCCAACACAAATCAAACTGGTCCGATCCGAGCTGCCCCTAATACTAATA
TGTTCCATCGATTTCAACCATATTGAGAACAATACGCACAATATTACAAC
TATATCACAGGAGGTTCAAGTGTACCCGTCACACCCAACACAAATCAAAC
TGGTCCGATCCGAGCTGCCCCTAATACTAATATGTTCCATCGATTTCAAC
CATATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000377_pilon | genome | sc0000377_pilon:96508..100010 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 883-1014:133 |
| Aaloc | 856-882:436 |
| Aaloc | 727-852:1425 |
| Aaloc | 574-723:1828 |
| Aaloc | 535-570:2292 |
| Aaloc | 388-534:2951 |
| Aaloc | 61-387:3504 |
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