|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000263_pilon:461032..463184+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025120 ID=XLOC_025120|Name=XLOC_025120|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2153bp|location=Sequence derived from alignment at sc0000263_pilon:461032..463184+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGATGTTAAAAAAGAAGTCGAAAACTTGGTCAAACAAAACCCACCATC
TCATCCAACAATAAAATGGCTTTTCGGATTAGTTCTATCGGAGCTCGGTG
AAAAAGGCGAACGCTCGTTTTTCGAAAAACTCTATTCGATCAAAGATGAC
CCTGTTCTTCAAGATACTGTGATTCTCAGTTCCATCAACTTTCTCACCAA
TGTCCAAAAGAAAATGCATCAGGAGATTGACGTCCtttttttCTCGTGGA
CCAAGAAATTAATCATAGGCGTTGAAATCAAACGGACGCTGACTATAAAA
GCTTTTCACCAGTTGGATAAATACCATAAATTGATAGAAGAGAGGTTGAG
TGATCAATTGGGACAAGGCTGGACGTATCATCCAGTCATTTTGGTTGAAA
AGGACGACCTTTCTTTTAACAATCAACATTATATTGACCAAGAAACAGAT
TTGAAATGTTGGTTATCCAACTTGCTGGCAAAATATCCGACTGTTCCCTC
TGAAATACCTTTCATCCCAGCAGTAAATCAAGTTAAAGACCTCCTAAGAA
TCGTTGTGTTTGCCATTCATGCTTCAAAAACAGCACCCATTACCAGATCA
AACTGGGTAGAGTATATCTCGAAAGCCATCGATACCGTCTGCACTACTGA
CAACATACTCTTTTACAGTCAGCGTCAACTTCCCATCATGAAGACAGACA
CTTCTGAATTCAATAAGATCCTCTTTTATGCCCCTTACGGATGCGGCAAG
TCTTTCATCCTTCAGGAGAAAGCAAAACAATTGAGTGAAATGACGGAATA
CAAAGGACGTGTTATGTATGTCATTCAGAGGGAATATCATTTAGAAACCC
TTCTTGAGTGGAGATTGAAAGACGAATTGGAAAAAGAACATGGAGTTGAC
GTCTATGGATACAGAAGATTCGAAGCCTATATAGTAAGTTGCATTTTGAA
Tctaattttgaatctttttgaaatctaaccaaataaaaaagatataaaaa
aattctagtttttaaGACTTTAACGTAGGTTTTCAATGATTCATAATTTG
CTTTTtccatcatctttttacaaaaaaaaaaacaccgtTCAAATTTGCAT
GCTGCAAGAATGAGAAAAATTTAACTGTTTCTATATGAGCATACGTGAAC
ATTTTAATCAAAAACTTATAAACTACATAATAGTGCACTGTTGTGATCTT
CTTCTCCTAATGTTACTAATATTGTTaaaaaaaGTCAGAAACGCTTGAAT
GTTCGATTTGGTCGTGAGCTTTTCCGTGGCAGATTTTCCGTAGATTATTT
GCAACCTCGCATTATTCCATATTTTTGAAgagattttgttaaaataaaat
tattctttttttacaaacagCATATTGAAAAGCTGATGAAAAAGATTCAA
ACGAAAAACATCAACGCATTATTCATCGATGAGTGTGACATTACCGGTAA
TCAATTGAAAGAAATGATAATGAAAGTCAAACAACACGTTAAGGTGATTT
GGATTGCATCAAACGGATCGGGTCATCGGCATTTTTTATCAGGTGAAGAA
AATTTACTCTTTACCAACGTTAATACTTTATCAGGTCTTGGAGATCTTTC
GCCGTATGACGATTTCATGAAATATGAACTTGACGTGAATTTAAGAAACT
GTAAAAGTATCGTTACAGAGGCTTTACGTCTTGAAGAAAGAGAAAGTTCG
GGATATAAAGAGGGTTTAGTACGTCCACCACAAAACCACCCTGACGGAGA
GAAACCCTACCATTCCAAATCATTTGAAGATGTCATCACAAAAATGAGAA
AGATCACGAACGATGGGGTGCTAGTGATATCTGATATTCATTACGTGGGG
GATGATTATCGAACATTGAGCAAGTTGCAATTGAAATGGAAAATGTATGG
AGAATATCTAAACCGTTTCAAAAAAGGTGAAAGTCCATATCATCATCTTG
TAGATGGAAACATTTTATTGATGAGGGACTATGGATTAATTTCCGGATTC
GAGTGGAAGAACATCATCATTATCAAGAAAGGAACCTTCGGTGCTGTTGA
TTACCATCCATGTAATTTGATCATGAGATGTACCACGAATCTCATGATTG
TTGACGTAGAAGAATTTTCTTCAGATGAAACCGATATAGTGAAGATTCTT
TAG Coding sequence (CDS) from alignment at sc0000263_pilon:461032..463184+ >XLOC_025120 ID=XLOC_025120|Name=XLOC_025120|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3432bp|location=Sequence derived from alignment at sc0000263_pilon:461032..463184+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGATGTTAAAAAAGAAGTCGAAAACTTGGTCAAACAAAACCCACCATC
TCATCCAACAATAAAATGGCTTTTCGGATTAGTTCTATCGGAGCTCGGTG
AAAAAGGCGAACGCTCGTTTTTCGAAAAACTCTATTCGATCAAAGATGAC
CCTGTTCTTCAAGATACTGTGATTCTCAGTTCCATCAACTTTCTCACCAA
TGTCCAAAAGAAAATGCATCAGGAGATTGACGTCCtttttttCTCGTGGA
CCAAGAAATTAATCATAGGCGTTGAAATCAAACGGACGCTGACTATAAAA
GCTTTTCACCAGTTGGATAAATACCATAAATTGATAGAAGAGAGGTTGAG
TGATCAATTGGGACAAGGCTGGACGTATCATCCAGTCATTTTGGTTGAAA
AGGACGACCTTTCTTTTAACAATCAACATTATATTGACCAAGAAACAGAT
TTGAAATGTTGGTTATCCAACTTGCTGGCAAAATATCCGACTGTTCCCTC
TGAAATACCTTTCATCCCAGCAGTAAATCAAGTTAAAGACCTCCTAAGAA
TCGTTGTGTTTGCCATTCATGCTTCAAAAACAGCACCCATTACCAGATCA
AACTGGGTAGAGTATATCTCGAAAGCCATCGATACCGTCTGCACTACTGA
CAACATACTCTTTTACAGTCAGCGTCAACTTCCCATCATGAAGACAGACA
CTTCTGAATTCAATAAGATCCTCTTTTATGCCCCTTACGGATGCGGCAAG
TCTTTCATCCTTCAGGAGAAAGCAAAACAATTGAGTGAAATGACGGAATA
CAAAGGACGTGTTATGTATGTCATTCAGAGGGAATATCATTTAGAAACCC
TTCTTGAGTGGAGATTGAAAGACGAATTGGAAAAAGAACATGGAGTTGAC
GTCTATGGATACAGAAGATTCGAAGCCTATATAAAAGATGTTAAAAAAGA
AGTCGAAAACTTGGTCAAACAAAACCCACCATCTCATCCAACAATAAAAT
GGCTTTTCGGATTAGTTCTATCGGAGCTCGGTGAAAAAGGCGAACGCTCG
TTTTTCGAAAAACTCTATTCGATCAAAGATGACCCTGTTCTTCAAGATAC
TGTGATTCTCAGTTCCATCAACTTTCTCACCAATGTCCAAAAGAAAATGC
ATCAGGAGATTGACGTCCtttttttCTCGTGGACCAAGAAATTAATCATA
GGCGTTGAAATCAAACGGACGCTGACTATAAAAGCTTTTCACCAGTTGGA
TAAATACCATAAATTGATAGAAGAGAGGTTGAGTGATCAATTGGGACAAG
GCTGGACGTATCATCCAGTCATTTTGGTTGAAAAGGACGACCTTTCTTTT
AACAATCAACATTATATTGACCAAGAAACAGATTTGAAATGTTGGTTATC
CAACTTGCTGGCAAAATATCCGACTGTTCCCTCTGAAATACCTTTCATCC
CAGCAGTAAATCAAGTTAAAGACCTCCTAAGAATCGTTGTGTTTGCCATT
CATGCTTCAAAAACAGCACCCATTACCAGATCAAACTGGGTAGAGTATAT
CTCGAAAGCCATCGATACCGTCTGCACTACTGACAACATACTCTTTTACA
GTCAGCGTCAACTTCCCATCATGAAGACAGACACTTCTGAATTCAATAAG
ATCCTCTTTTATGCCCCTTACGGATGCGGCAAGTCTTTCATCCTTCAGGA
GAAAGCAAAACAATTGAGTGAAATGACGGAATACAAAGGACGTGTTATGT
ATGTCATTCAGAGGGAATATCATTTAGAAACCCTTCTTGAGTGGAGATTG
AAAGACGAATTGGAAAAAGAACATGGAGTTGACGTCTATGGATACAGAAG
ATTCGAAGCCTATATACATATTGAAAAGCTGATGAAAAAGATTCAAACGA
AAAACATCAACGCATTATTCATCGATGAGTGTGACATTACCGGTAATCAA
TTGAAAGAAATGATAATGAAAGTCAAACAACACGTTAAGGTGATTTGGAT
TGCATCAAACGGATCGGGTCATCGGCATTTTTTATCAGGTGAAGAAAATT
TACTCTTTACCAACGTTAATACTTTATCAGGTCTTGGAGATCTTTCGCCG
TATGACGATTTCATGAAATATGAACTTGACGTGAATTTAAGAAACTGTAA
AAGTATCGTTACAGAGGCTTTACGTCTTGAAGAAAGAGAAAGTTCGGGAT
ATAAAGAGGGTTTAGTACGTCCACCACAAAACCACCCTGACGGAGAGAAA
CCCTACCATTCCAAATCATTTGAAGATGTCATCACAAAAATGAGAAAGAT
CACGAACGATGGGGTGCTAGTGATATCTGATATTCATTACGTGGGGGATG
ATTATCGAACATTGAGCAAGTTGCAATTGAAATGGAAAATGTATGGAGAA
TATCTAAACCGTTTCAAAAAAGGTGAAAGTCCATATCATCATCTTGTAGA
TGGAAACATTTTATTGATGAGGGACTATGGATTAATTTCCGGATTCGAGT
GGAAGAACATCATCATTATCAAGAAAGGAACCTTCGGTGCTGTTGATTAC
CATCCATGTAATTTGATCATGAGATGTACCACGAATCTCATGATTGTTGA
CGTAGAAGAATTTTCTTCAGATGAAACCGATATAGTGAAGATTCTTTAGC
ATATTGAAAAGCTGATGAAAAAGATTCAAACGAAAAACATCAACGCATTA
TTCATCGATGAGTGTGACATTACCGGTAATCAATTGAAAGAAATGATAAT
GAAAGTCAAACAACACGTTAAGGTGATTTGGATTGCATCAAACGGATCGG
GTCATCGGCATTTTTTATCAGGTGAAGAAAATTTACTCTTTACCAACGTT
AATACTTTATCAGGTCTTGGAGATCTTTCGCCGTATGACGATTTCATGAA
ATATGAACTTGACGTGAATTTAAGAAACTGTAAAAGTATCGTTACAGAGG
CTTTACGTCTTGAAGAAAGAGAAAGTTCGGGATATAAAGAGGGTTTAGTA
CGTCCACCACAAAACCACCCTGACGGAGAGAAACCCTACCATTCCAAATC
ATTTGAAGATGTCATCACAAAAATGAGAAAGATCACGAACGATGGGGTGC
TAGTGATATCTGATATTCATTACGTGGGGGATGATTATCGAACATTGAGC
AAGTTGCAATTGAAATGGAAAATGTATGGAGAATATCTAAACCGTTTCAA
AAAAGGTGAAAGTCCATATCATCATCTTGTAGATGGAAACATTTTATTGA
TGAGGGACTATGGATTAATTTCCGGATTCGAGTGGAAGAACATCATCATT
ATCAAGAAAGGAACCTTCGGTGCTGTTGATTACCATCCATGTAATTTGAT
CATGAGATGTACCACGAATCTCATGATTGTTGACGTAGAAGAATTTTCTT
CAGATGAAACCGATATAGTGAAGATTCTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000263_pilon | genome | sc0000263_pilon:461032..463184 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 934-1716:1371 |
| Aaloc | 1-933:1 |
|
